RNA–Protein interactions for RNA: ENST00000512242.5

COPB2-209, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-209ENST00000512242 PHF14O94880 888 aa14.87□□□□□ -0.03
COPB2-209ENST00000512242 ZNF530Q6P9A1 599 aaPredicted RBP14.87□□□□□ -0.03
COPB2-209ENST00000512242 LOC102724428A0A0B4J2F2 783 aa14.86□□□□□ -0.03
COPB2-209ENST00000512242 ATP6V1AP38606 617 aa14.86□□□□□ -0.03
COPB2-209ENST00000512242 MTHFSP49914 203 aa14.86□□□□□ -0.03
COPB2-209ENST00000512242 SIK1P57059 783 aa14.86□□□□□ -0.03
COPB2-209ENST00000512242 AK7Q96M32 723 aa14.86□□□□□ -0.03
COPB2-209ENST00000512242 HMGB2P26583 209 aaKnown RBP14.85□□□□□ -0.03
COPB2-209ENST00000512242 IL13P35225 146 aa14.85□□□□□ -0.03
COPB2-209ENST00000512242 AMOTQ4VCS5 1084 aa14.85□□□□□ -0.03
COPB2-209ENST00000512242 C1orf141Q5JVX7 400 aa14.85□□□□□ -0.03
COPB2-209ENST00000512242 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
COPB2-209ENST00000512242 ATG3Q9NT62 314 aa14.85□□□□□ -0.03
COPB2-209ENST00000512242 QSER1Q2KHR3 1735 aa14.85□□□□□ -0.03
COPB2-209ENST00000512242 C5P01031 1676 aa14.84□□□□□ -0.03
COPB2-209ENST00000512242 PER1O15534 1290 aaPredicted RBP14.84□□□□□ -0.03
COPB2-209ENST00000512242 HSP90AB1P08238 724 aaKnown RBP14.84□□□□□ -0.03
COPB2-209ENST00000512242 FLAD1Q8NFF5 587 aa14.84□□□□□ -0.03
COPB2-209ENST00000512242 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
COPB2-209ENST00000512242 TAF1LQ8IZX4 1826 aa14.84□□□□□ -0.03
COPB2-209ENST00000512242 HMOX1P09601 288 aa14.83□□□□□ -0.04
COPB2-209ENST00000512242 CABP4P57796 275 aa14.83□□□□□ -0.04
COPB2-209ENST00000512242 GPR162Q16538 588 aa14.83□□□□□ -0.04
COPB2-209ENST00000512242 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.04
COPB2-209ENST00000512242 LINC00116Q8NCU8 138 aa14.83□□□□□ -0.04
COPB2-209ENST00000512242 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
COPB2-209ENST00000512242 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
COPB2-209ENST00000512242 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
COPB2-209ENST00000512242 ITPK1Q13572 414 aa14.82□□□□□ -0.04
COPB2-209ENST00000512242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.81□□□□□ -0.04
COPB2-209ENST00000512242 GNPATO15228 680 aa14.81□□□□□ -0.04
COPB2-209ENST00000512242 NLGN2Q8NFZ4 835 aa14.81□□□□□ -0.04
COPB2-209ENST00000512242 C4BP0C0L5 1744 aa14.8□□□□□ -0.04
COPB2-209ENST00000512242 NFATC2IPQ8NCF5 419 aa14.8□□□□□ -0.04
COPB2-209ENST00000512242 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
COPB2-209ENST00000512242 PTCD1O75127 700 aaKnown RBP14.79□□□□□ -0.04
COPB2-209ENST00000512242 MAP3K5Q99683 1374 aa14.78□□□□□ -0.04
COPB2-209ENST00000512242 SLC4A9Q96Q91 983 aa14.78□□□□□ -0.04
COPB2-209ENST00000512242 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
COPB2-209ENST00000512242 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.04
COPB2-209ENST00000512242 U2SURPO15042 1029 aaKnown RBP14.77□□□□□ -0.05
COPB2-209ENST00000512242 SSFA2P28290 1259 aa14.77□□□□□ -0.05
COPB2-209ENST00000512242 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
COPB2-209ENST00000512242 KDRP35968 1356 aa14.76□□□□□ -0.05
COPB2-209ENST00000512242 PLEKHG2Q9H7P9 1386 aa14.76□□□□□ -0.05
COPB2-209ENST00000512242 COL24A1Q17RW2 1714 aa14.76□□□□□ -0.05
COPB2-209ENST00000512242 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
COPB2-209ENST00000512242 LGR6Q9HBX8 967 aa14.76□□□□□ -0.05
COPB2-209ENST00000512242 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
COPB2-209ENST00000512242 CHD4Q14839 1912 aa14.75□□□□□ -0.05
COPB2-209ENST00000512242 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
COPB2-209ENST00000512242 WWC3Q9ULE0 1092 aa14.75□□□□□ -0.05
COPB2-209ENST00000512242 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
COPB2-209ENST00000512242 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
COPB2-209ENST00000512242 YBX3P16989 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
COPB2-209ENST00000512242 SLC39A6Q13433 755 aa14.72□□□□□ -0.05
COPB2-209ENST00000512242 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
COPB2-209ENST00000512242 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
COPB2-209ENST00000512242 CD2APQ9Y5K6 639 aa14.72□□□□□ -0.05
COPB2-209ENST00000512242 RPS6KA4O75676 772 aa14.71□□□□□ -0.05
COPB2-209ENST00000512242 MMP10P09238 476 aa14.71□□□□□ -0.05
COPB2-209ENST00000512242 RFC4P35249 363 aa14.71□□□□□ -0.05
COPB2-209ENST00000512242 RC3H1Q5TC82 1133 aaKnown RBP14.71□□□□□ -0.05
COPB2-209ENST00000512242 ZNF784Q8NCA9 323 aaPredicted RBP14.71□□□□□ -0.05
COPB2-209ENST00000512242 NPC1L1Q9UHC9 1359 aa14.71□□□□□ -0.06
COPB2-209ENST00000512242 MYH14Q7Z406 1995 aaKnown RBP14.71□□□□□ -0.06
COPB2-209ENST00000512242 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
COPB2-209ENST00000512242 CRKLP46109 303 aaKnown RBP14.7□□□□□ -0.06
COPB2-209ENST00000512242 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
COPB2-209ENST00000512242 CNTNAP4Q9C0A0 1308 aa14.69□□□□□ -0.06
COPB2-209ENST00000512242 GRIN3BO60391 1043 aa14.69□□□□□ -0.06
COPB2-209ENST00000512242 DNAJC10Q8IXB1 793 aa14.69□□□□□ -0.06
COPB2-209ENST00000512242 NLGN1Q8N2Q7 840 aa14.69□□□□□ -0.06
COPB2-209ENST00000512242 VIRMAQ69YN4 1812 aaKnown RBP14.68□□□□□ -0.06
COPB2-209ENST00000512242 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
COPB2-209ENST00000512242 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
COPB2-209ENST00000512242 GYS1P13807 737 aa14.66□□□□□ -0.06
COPB2-209ENST00000512242 PRKAR2BP31323 418 aa14.66□□□□□ -0.06
COPB2-209ENST00000512242 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
COPB2-209ENST00000512242 SRP68Q9UHB9 627 aaKnown RBP14.66□□□□□ -0.06
COPB2-209ENST00000512242 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
COPB2-209ENST00000512242 COL3A1P02461 1466 aaPredicted RBP14.65□□□□□ -0.06
COPB2-209ENST00000512242 GNAT3A8MTJ3 354 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 TEFQ10587 303 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 INTS5Q6P9B9 1019 aaKnown RBP14.65□□□□□ -0.06
COPB2-209ENST00000512242 IL17REQ8NFR9 667 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 GAS2L2Q8NHY3 880 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 PHACTR3Q96KR7 559 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 PARP3Q9Y6F1 533 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 COL5A3P25940 1745 aaPredicted RBP14.65□□□□□ -0.06
COPB2-209ENST00000512242 ZNF831Q5JPB2 1677 aa14.65□□□□□ -0.06
COPB2-209ENST00000512242 TTC5Q8N0Z6 440 aa14.64□□□□□ -0.07
COPB2-209ENST00000512242 CCDC87Q9NVE4 849 aa14.64□□□□□ -0.07
COPB2-209ENST00000512242 A0A0G2JLW4 131 aa14.63□□□□□ -0.07
COPB2-209ENST00000512242 ZPR1O75312 459 aa14.63□□□□□ -0.07
COPB2-209ENST00000512242 CYP19A1P11511 503 aaPredicted RBP14.63□□□□□ -0.07
COPB2-209ENST00000512242 CANXP27824 592 aaKnown RBP14.62□□□□□ -0.07
COPB2-209ENST00000512242 DSG3P32926 999 aa14.62□□□□□ -0.07
COPB2-209ENST00000512242 FKBP8Q14318 412 aa14.62□□□□□ -0.07
COPB2-209ENST00000512242 USPL1Q5W0Q7 1092 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms