RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 DDX54Q8TDD1 881 aaKnown RBP9.52□□□□□ -0.89
CLDND1-225ENST00000512147 NSD3Q9BZ95 1437 aa9.52□□□□□ -0.89
CLDND1-225ENST00000512147 SZT2Q5T011 3432 aa9.52□□□□□ -0.89
CLDND1-225ENST00000512147 SSFA2P28290 1259 aa9.51□□□□□ -0.89
CLDND1-225ENST00000512147 NLGN1Q8N2Q7 840 aa9.51□□□□□ -0.89
CLDND1-225ENST00000512147 ADGRF5Q8IZF2 1346 aa9.51□□□□□ -0.89
CLDND1-225ENST00000512147 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
CLDND1-225ENST00000512147 DDNO94850 711 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-225ENST00000512147 PKN2Q16513 984 aaKnown RBP9.5□□□□□ -0.89
CLDND1-225ENST00000512147 CIAPIN1Q6FI81 312 aa9.5□□□□□ -0.89
CLDND1-225ENST00000512147 TAF1DQ9H5J8 278 aaPredicted RBP9.5□□□□□ -0.89
CLDND1-225ENST00000512147 DDX21Q9NR30 783 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLDND1-225ENST00000512147 WASLO00401 505 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-225ENST00000512147 ERFEQ4G0M1 354 aa9.49□□□□□ -0.89
CLDND1-225ENST00000512147 MAP1SQ66K74 1059 aaPredicted RBP9.49□□□□□ -0.89
CLDND1-225ENST00000512147 AMIGO3Q86WK7 504 aa9.49□□□□□ -0.89
CLDND1-225ENST00000512147 PARP3Q9Y6F1 533 aa9.49□□□□□ -0.89
CLDND1-225ENST00000512147 NBPF1Q3BBV0 1214 aa9.48□□□□□ -0.89
CLDND1-225ENST00000512147 AKAP4Q5JQC9 854 aa9.48□□□□□ -0.89
CLDND1-225ENST00000512147 C5P01031 1676 aa9.48□□□□□ -0.89
CLDND1-225ENST00000512147 CEP290O15078 2479 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 TMF1P82094 1093 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 RAPGEFL1Q9UHV5 662 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 COL6A3P12111 3177 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 TIAM2Q8IVF5 1701 aa9.47□□□□□ -0.89
CLDND1-225ENST00000512147 POLR3AO14802 1390 aaPredicted RBP9.47□□□□□ -0.89
CLDND1-225ENST00000512147 PPLO60437 1756 aa9.46□□□□□ -0.9
CLDND1-225ENST00000512147 NLRP6P59044 892 aa9.46□□□□□ -0.9
CLDND1-225ENST00000512147 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
CLDND1-225ENST00000512147 PNMA8AQ86V59 439 aaPredicted RBP9.46□□□□□ -0.9
CLDND1-225ENST00000512147 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
CLDND1-225ENST00000512147 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
CLDND1-225ENST00000512147 TLL2Q9Y6L7 1015 aa9.46□□□□□ -0.9
CLDND1-225ENST00000512147 ACEP12821 1306 aa9.46□□□□□ -0.9
CLDND1-225ENST00000512147 CHRNA5P30532 468 aa9.45□□□□□ -0.9
CLDND1-225ENST00000512147 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
CLDND1-225ENST00000512147 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
CLDND1-225ENST00000512147 NSD2O96028 1365 aa9.45□□□□□ -0.9
CLDND1-225ENST00000512147 SAGE1Q9NXZ1 904 aa9.44□□□□□ -0.9
CLDND1-225ENST00000512147 L3MBTL3Q96JM7 780 aaPredicted RBP9.43□□□□□ -0.9
CLDND1-225ENST00000512147 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
CLDND1-225ENST00000512147 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
CLDND1-225ENST00000512147 CCDC88AQ3V6T2 1871 aa9.42□□□□□ -0.9
CLDND1-225ENST00000512147 H0YGN5 161 aa9.42□□□□□ -0.9
CLDND1-225ENST00000512147 EPHX2P34913 555 aa9.42□□□□□ -0.9
CLDND1-225ENST00000512147 NOGQ13253 232 aa9.42□□□□□ -0.9
CLDND1-225ENST00000512147 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
CLDND1-225ENST00000512147 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
CLDND1-225ENST00000512147 CPSF1Q10570 1443 aaKnown RBP9.41□□□□□ -0.9
CLDND1-225ENST00000512147 ERBB4Q15303 1308 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 SCN4AP35499 1836 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 NFKBIEO00221 500 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
CLDND1-225ENST00000512147 GNPATO15228 680 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 CST9Q5W186 159 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 HHIPL1Q96JK4 782 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 CABP2Q9NPB3 220 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 HDAC9Q9UKV0 1011 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 STXBP5LQ9Y2K9 1186 aa9.41□□□□□ -0.9
CLDND1-225ENST00000512147 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.9
CLDND1-225ENST00000512147 PALLDQ8WX93 1383 aa9.4□□□□□ -0.9
CLDND1-225ENST00000512147 TRPA1O75762 1119 aa9.4□□□□□ -0.9
CLDND1-225ENST00000512147 SAPCD2Q86UD0 394 aa9.4□□□□□ -0.9
CLDND1-225ENST00000512147 SLIT3O75094 1523 aa9.4□□□□□ -0.91
CLDND1-225ENST00000512147 TAF1LQ8IZX4 1826 aa9.4□□□□□ -0.91
CLDND1-225ENST00000512147 TOGARAM1Q9Y4F4 1720 aa9.39□□□□□ -0.91
CLDND1-225ENST00000512147 FMR1Q06787 632 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLDND1-225ENST00000512147 TRAPPC3LQ5T215 181 aa9.39□□□□□ -0.91
CLDND1-225ENST00000512147 KCNH5Q8NCM2 988 aa9.39□□□□□ -0.91
CLDND1-225ENST00000512147 C14orf93Q9H972 538 aaKnown RBP9.39□□□□□ -0.91
CLDND1-225ENST00000512147 C4AP0C0L4 1744 aa9.39□□□□□ -0.91
CLDND1-225ENST00000512147 RGPD5Q99666 1765 aa9.38□□□□□ -0.91
CLDND1-225ENST00000512147 INTS3Q68E01 1043 aaKnown RBP9.38□□□□□ -0.91
CLDND1-225ENST00000512147 FBXO46Q6PJ61 603 aaPredicted RBP9.38□□□□□ -0.91
CLDND1-225ENST00000512147 TTLL6Q8N841 843 aa9.38□□□□□ -0.91
CLDND1-225ENST00000512147 CCDC61Q9Y6R9 512 aa9.38□□□□□ -0.91
CLDND1-225ENST00000512147 DOT1LQ8TEK3 1739 aa9.37□□□□□ -0.91
CLDND1-225ENST00000512147 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
CLDND1-225ENST00000512147 POTEFA5A3E0 1075 aa9.37□□□□□ -0.91
CLDND1-225ENST00000512147 RGL3Q3MIN7 710 aa9.37□□□□□ -0.91
CLDND1-225ENST00000512147 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
CLDND1-225ENST00000512147 RNF186Q9NXI6 227 aa9.37□□□□□ -0.91
CLDND1-225ENST00000512147 SOX12O15370 315 aa9.36□□□□□ -0.91
CLDND1-225ENST00000512147 FAM50AQ14320 339 aaKnown RBP9.36□□□□□ -0.91
CLDND1-225ENST00000512147 ZIC5Q96T25 663 aa9.36□□□□□ -0.91
CLDND1-225ENST00000512147 PIK3C2GO75747 1445 aa9.36□□□□□ -0.91
CLDND1-225ENST00000512147 GYS1P13807 737 aa9.35□□□□□ -0.91
CLDND1-225ENST00000512147 CFAP70Q5T0N1 1121 aa9.35□□□□□ -0.91
CLDND1-225ENST00000512147 DEFB123Q8N688 67 aa9.35□□□□□ -0.91
CLDND1-225ENST00000512147 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
CLDND1-225ENST00000512147 TTC28Q96AY4 2481 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 PIEZO1Q92508 2521 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 TMEM265A0A087WTH1 108 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 TRAF5O00463 557 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 LRCH3Q96II8 777 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
CLDND1-225ENST00000512147 RTCBQ9Y3I0 505 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms