RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 TEFQ10587 303 aa12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
PDGFRA-209ENST00000512143 DDB1Q16531 1140 aa12.91□□□□□ -0.34
PDGFRA-209ENST00000512143 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
PDGFRA-209ENST00000512143 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
PDGFRA-209ENST00000512143 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
PDGFRA-209ENST00000512143 FAM98CQ17RN3 349 aaKnown RBP12.9□□□□□ -0.34
PDGFRA-209ENST00000512143 KRT24Q2M2I5 525 aa12.9□□□□□ -0.34
PDGFRA-209ENST00000512143 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
PDGFRA-209ENST00000512143 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
PDGFRA-209ENST00000512143 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 KCNQ3O43525 872 aa12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 BCAR3O75815 825 aa12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
PDGFRA-209ENST00000512143 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
PDGFRA-209ENST00000512143 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
PDGFRA-209ENST00000512143 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
PDGFRA-209ENST00000512143 CABP4P57796 275 aa12.87□□□□□ -0.35
PDGFRA-209ENST00000512143 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
PDGFRA-209ENST00000512143 HOXB7P09629 217 aa12.86□□□□□ -0.35
PDGFRA-209ENST00000512143 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
PDGFRA-209ENST00000512143 ITGB4P16144 1822 aa12.85□□□□□ -0.35
PDGFRA-209ENST00000512143 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
PDGFRA-209ENST00000512143 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
PDGFRA-209ENST00000512143 SLC39A6Q13433 755 aa12.85□□□□□ -0.35
PDGFRA-209ENST00000512143 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
PDGFRA-209ENST00000512143 BCL9O00512 1426 aa12.85□□□□□ -0.35
PDGFRA-209ENST00000512143 PLIN1O60240 522 aa12.84□□□□□ -0.35
PDGFRA-209ENST00000512143 PIGBQ92521 554 aa12.84□□□□□ -0.35
PDGFRA-209ENST00000512143 RGS17Q9UGC6 210 aaPredicted RBP12.84□□□□□ -0.35
PDGFRA-209ENST00000512143 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
PDGFRA-209ENST00000512143 UBR2Q8IWV8 1755 aa12.84□□□□□ -0.35
PDGFRA-209ENST00000512143 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
PDGFRA-209ENST00000512143 ZNF496Q96IT1 587 aaPredicted RBP12.83□□□□□ -0.36
PDGFRA-209ENST00000512143 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
PDGFRA-209ENST00000512143 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
PDGFRA-209ENST00000512143 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
PDGFRA-209ENST00000512143 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
PDGFRA-209ENST00000512143 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
PDGFRA-209ENST00000512143 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
PDGFRA-209ENST00000512143 C20orf194Q5TEA3 1177 aa12.81□□□□□ -0.36
PDGFRA-209ENST00000512143 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
PDGFRA-209ENST00000512143 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
PDGFRA-209ENST00000512143 FMNL2Q96PY5 1086 aa12.81□□□□□ -0.36
PDGFRA-209ENST00000512143 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 NEFLP07196 543 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 FKBP8Q14318 412 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 TTC5Q8N0Z6 440 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
PDGFRA-209ENST00000512143 SNRPA1P09661 255 aaKnown RBP12.79□□□□□ -0.36
PDGFRA-209ENST00000512143 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
PDGFRA-209ENST00000512143 ZKSCAN2Q63HK3 967 aa12.79□□□□□ -0.36
PDGFRA-209ENST00000512143 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
PDGFRA-209ENST00000512143 C5P01031 1676 aa12.79□□□□□ -0.36
PDGFRA-209ENST00000512143 A0A0G2JS52 829 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 TRIM27P14373 513 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 MYT1Q01538 1121 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
PDGFRA-209ENST00000512143 KCNQ2O43526 872 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 RLBP1P12271 317 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 PDIA6Q15084 440 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 G2E3Q7L622 706 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 RGS12O14924 1447 aa12.77□□□□□ -0.37
PDGFRA-209ENST00000512143 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 RXRBP28702 533 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
PDGFRA-209ENST00000512143 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms