RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 PHKA2P46019 1235 aa11.48□□□□□ -0.57
NPHP3-210ENST00000512094 MKL2Q9ULH7 1088 aa11.48□□□□□ -0.57
NPHP3-210ENST00000512094 CENPCQ03188 943 aa11.47□□□□□ -0.57
NPHP3-210ENST00000512094 KLRG1Q96E93 195 aa11.47□□□□□ -0.57
NPHP3-210ENST00000512094 A0A1B0GTH6 734 aa11.46□□□□□ -0.57
NPHP3-210ENST00000512094 ZSCAN10Q96SZ4 725 aaPredicted RBP11.46□□□□□ -0.57
NPHP3-210ENST00000512094 C1orf229Q6ZS94 237 aaPredicted RBP11.45□□□□□ -0.58
NPHP3-210ENST00000512094 RRAGCQ9HB90 399 aa11.45□□□□□ -0.58
NPHP3-210ENST00000512094 KRBA1A5PL33 1030 aa11.44□□□□□ -0.58
NPHP3-210ENST00000512094 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
NPHP3-210ENST00000512094 MYCP01106 439 aaPredicted RBP11.44□□□□□ -0.58
NPHP3-210ENST00000512094 GNASQ5JWF2 1037 aa11.44□□□□□ -0.58
NPHP3-210ENST00000512094 GDF2Q9UK05 429 aaPredicted RBP11.44□□□□□ -0.58
NPHP3-210ENST00000512094 GPR37L1O60883 481 aa11.43□□□□□ -0.58
NPHP3-210ENST00000512094 GTF2E1P29083 439 aaPredicted RBP11.43□□□□□ -0.58
NPHP3-210ENST00000512094 EDARADDQ8WWZ3 215 aa11.43□□□□□ -0.58
NPHP3-210ENST00000512094 RUBCNLQ9H714 662 aa11.43□□□□□ -0.58
NPHP3-210ENST00000512094 CSB-PGBD3P0DP91 1061 aa11.42□□□□□ -0.58
NPHP3-210ENST00000512094 BAG6P46379 1132 aa11.42□□□□□ -0.58
NPHP3-210ENST00000512094 UBAP2LQ14157 1087 aaKnown RBP11.42□□□□□ -0.58
NPHP3-210ENST00000512094 LBRQ14739 615 aaKnown RBP11.42□□□□□ -0.58
NPHP3-210ENST00000512094 TMEM214Q6NUQ4 689 aaKnown RBP11.42□□□□□ -0.58
NPHP3-210ENST00000512094 ALYREFQ86V81 257 aaKnown RBP11.42□□□□□ -0.58
NPHP3-210ENST00000512094 PGBD3Q8N328 593 aa11.42□□□□□ -0.58
NPHP3-210ENST00000512094 GOLGA6L1Q8N7Z2 621 aa11.42□□□□□ -0.58
NPHP3-210ENST00000512094 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
NPHP3-210ENST00000512094 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
NPHP3-210ENST00000512094 NDUFB9Q9Y6M9 179 aa11.42□□□□□ -0.58
NPHP3-210ENST00000512094 COL8A1P27658 744 aa11.41□□□□□ -0.58
NPHP3-210ENST00000512094 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
NPHP3-210ENST00000512094 BMP4P12644 408 aa11.4□□□□□ -0.58
NPHP3-210ENST00000512094 MSX1P28360 303 aa11.4□□□□□ -0.58
NPHP3-210ENST00000512094 C4orf17Q53FE4 359 aa11.4□□□□□ -0.58
NPHP3-210ENST00000512094 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
NPHP3-210ENST00000512094 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
NPHP3-210ENST00000512094 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
NPHP3-210ENST00000512094 ATXN7L1Q9ULK2 861 aaPredicted RBP11.4□□□□□ -0.58
NPHP3-210ENST00000512094 EFHC2Q5JST6 749 aa11.39□□□□□ -0.59
NPHP3-210ENST00000512094 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
NPHP3-210ENST00000512094 SOCS7O14512 581 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 AMPD1P23109 780 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 GRIN2CQ14957 1233 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 ESCO1Q5FWF5 840 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 ABHD17AQ96GS6 310 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 CEP126Q9P2H0 1117 aa11.38□□□□□ -0.59
NPHP3-210ENST00000512094 SLCO4C1Q6ZQN7 724 aa11.37□□□□□ -0.59
NPHP3-210ENST00000512094 C2CD2LO14523 706 aa11.36□□□□□ -0.59
NPHP3-210ENST00000512094 FGFR3P22607 806 aa11.36□□□□□ -0.59
NPHP3-210ENST00000512094 NEUROD2Q15784 382 aa11.36□□□□□ -0.59
NPHP3-210ENST00000512094 SUV39H2Q9H5I1 410 aa11.35□□□□□ -0.59
NPHP3-210ENST00000512094 GGA1Q9UJY5 639 aa11.35□□□□□ -0.59
NPHP3-210ENST00000512094 APBB1O00213 710 aa11.34□□□□□ -0.59
NPHP3-210ENST00000512094 FURINP09958 794 aa11.34□□□□□ -0.59
NPHP3-210ENST00000512094 HOXB4P17483 251 aaPredicted RBP11.34□□□□□ -0.59
NPHP3-210ENST00000512094 LINC00114Q6XXX2 140 aa11.34□□□□□ -0.59
NPHP3-210ENST00000512094 RHBDD1Q8TEB9 315 aa11.34□□□□□ -0.59
NPHP3-210ENST00000512094 NDFIP2Q9NV92 336 aa11.34□□□□□ -0.59
NPHP3-210ENST00000512094 BNIP3LO60238 219 aa11.33□□□□□ -0.6
NPHP3-210ENST00000512094 CTBSQ01459 385 aa11.33□□□□□ -0.6
NPHP3-210ENST00000512094 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
NPHP3-210ENST00000512094 PIK3R2O00459 728 aa11.32□□□□□ -0.6
NPHP3-210ENST00000512094 TLR1Q15399 786 aa11.32□□□□□ -0.6
NPHP3-210ENST00000512094 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
NPHP3-210ENST00000512094 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
NPHP3-210ENST00000512094 GNB5O14775 395 aa11.31□□□□□ -0.6
NPHP3-210ENST00000512094 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
NPHP3-210ENST00000512094 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
NPHP3-210ENST00000512094 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
NPHP3-210ENST00000512094 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
NPHP3-210ENST00000512094 EPXP11678 715 aa11.29□□□□□ -0.6
NPHP3-210ENST00000512094 TBC1D9Q6ZT07 1266 aa11.29□□□□□ -0.6
NPHP3-210ENST00000512094 BCANQ96GW7 911 aa11.29□□□□□ -0.6
NPHP3-210ENST00000512094 BTBD6Q96KE9 485 aa11.29□□□□□ -0.6
NPHP3-210ENST00000512094 ARAFP10398 606 aa11.28□□□□□ -0.6
NPHP3-210ENST00000512094 USP4Q13107 963 aa11.28□□□□□ -0.6
NPHP3-210ENST00000512094 TSGA10IPQ3SY00 556 aa11.28□□□□□ -0.6
NPHP3-210ENST00000512094 FIGNL1Q6PIW4 674 aa11.28□□□□□ -0.6
NPHP3-210ENST00000512094 RNF135Q8IUD6 432 aa11.28□□□□□ -0.6
NPHP3-210ENST00000512094 Q8N3U1 123 aa11.28□□□□□ -0.6
NPHP3-210ENST00000512094 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.61
NPHP3-210ENST00000512094 DGKGP49619 791 aa11.27□□□□□ -0.61
NPHP3-210ENST00000512094 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
NPHP3-210ENST00000512094 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
NPHP3-210ENST00000512094 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
NPHP3-210ENST00000512094 OXLD1Q5BKU9 147 aa11.26□□□□□ -0.61
NPHP3-210ENST00000512094 NOP53Q9NZM5 478 aaKnown RBP11.26□□□□□ -0.61
NPHP3-210ENST00000512094 PCDHGC4Q9Y5F7 938 aa11.26□□□□□ -0.61
NPHP3-210ENST00000512094 ATP4AP20648 1035 aa11.25□□□□□ -0.61
NPHP3-210ENST00000512094 CD163Q86VB7 1156 aa11.25□□□□□ -0.61
NPHP3-210ENST00000512094 PHTF2Q8N3S3 785 aa11.25□□□□□ -0.61
NPHP3-210ENST00000512094 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
NPHP3-210ENST00000512094 EIF4G2P78344 907 aaKnown RBP eCLIP11.24□□□□□ -0.61
NPHP3-210ENST00000512094 CHRNA4P43681 627 aa11.23□□□□□ -0.61
NPHP3-210ENST00000512094 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
NPHP3-210ENST00000512094 NLRP8Q86W28 1048 aa11.23□□□□□ -0.61
NPHP3-210ENST00000512094 C1orf216Q8TAB5 229 aa11.23□□□□□ -0.61
NPHP3-210ENST00000512094 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
NPHP3-210ENST00000512094 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
NPHP3-210ENST00000512094 ATXN7O15265 892 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms