RNA–Protein interactions for RNA: ENST00000511412.1

ALYREF-203, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-203ENST00000511412 KDRP35968 1356 aa33.59■■■□□ 2.97
ALYREF-203ENST00000511412 ATP6V1AP38606 617 aa33.58■■■□□ 2.97
ALYREF-203ENST00000511412 AMIGO3Q86WK7 504 aa33.58■■■□□ 2.97
ALYREF-203ENST00000511412 ZNF831Q5JPB2 1677 aa33.58■■■□□ 2.97
ALYREF-203ENST00000511412 SULT6B1Q6IMI4 303 aa33.57■■■□□ 2.96
ALYREF-203ENST00000511412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.56■■■□□ 2.96
ALYREF-203ENST00000511412 SSFA2P28290 1259 aa33.56■■■□□ 2.96
ALYREF-203ENST00000511412 IL13P35225 146 aa33.56■■■□□ 2.96
ALYREF-203ENST00000511412 ITPK1Q13572 414 aa33.56■■■□□ 2.96
ALYREF-203ENST00000511412 C1orf141Q5JVX7 400 aa33.55■■■□□ 2.96
ALYREF-203ENST00000511412 PELP1Q8IZL8 1130 aaKnown RBP33.54■■■□□ 2.96
ALYREF-203ENST00000511412 GNPATO15228 680 aa33.52■■■□□ 2.96
ALYREF-203ENST00000511412 SMIM5Q71RC9 77 aa33.52■■■□□ 2.96
ALYREF-203ENST00000511412 COL5A3P25940 1745 aaPredicted RBP33.51■■■□□ 2.96
ALYREF-203ENST00000511412 PER1O15534 1290 aaPredicted RBP33.51■■■□□ 2.95
ALYREF-203ENST00000511412 CABP4P57796 275 aa33.51■■■□□ 2.95
ALYREF-203ENST00000511412 MTHFSP49914 203 aa33.5■■■□□ 2.95
ALYREF-203ENST00000511412 CC2D1BQ5T0F9 858 aaKnown RBP33.49■■■□□ 2.95
ALYREF-203ENST00000511412 SCN11AQ9UI33 1791 aa33.48■■■□□ 2.95
ALYREF-203ENST00000511412 RBM42Q9BTD8 480 aaKnown RBP33.48■■■□□ 2.95
ALYREF-203ENST00000511412 ZNF784Q8NCA9 323 aaPredicted RBP33.47■■■□□ 2.95
ALYREF-203ENST00000511412 CD2APQ9Y5K6 639 aa33.46■■■□□ 2.95
ALYREF-203ENST00000511412 SLC4A9Q96Q91 983 aa33.45■■■□□ 2.95
ALYREF-203ENST00000511412 GOLGB1Q14789 3259 aaKnown RBP33.45■■■□□ 2.94
ALYREF-203ENST00000511412 NPC1L1Q9UHC9 1359 aa33.43■■■□□ 2.94
ALYREF-203ENST00000511412 RTCBQ9Y3I0 505 aaKnown RBP33.42■■■□□ 2.94
ALYREF-203ENST00000511412 AKAP4Q5JQC9 854 aa33.41■■■□□ 2.94
ALYREF-203ENST00000511412 CNTNAP4Q9C0A0 1308 aa33.41■■■□□ 2.94
ALYREF-203ENST00000511412 CICQ96RK0 1608 aaPredicted RBP33.41■■■□□ 2.94
ALYREF-203ENST00000511412 HMOX1P09601 288 aa33.4■■■□□ 2.94
ALYREF-203ENST00000511412 YBX3P16989 372 aaKnown RBP eCLIP33.4■■■□□ 2.942e-7■■□□□ 13.4
ALYREF-203ENST00000511412 GRIN3BO60391 1043 aa33.39■■■□□ 2.94
ALYREF-203ENST00000511412 DIAPH1O60610 1272 aaKnown RBP33.39■■■□□ 2.94
ALYREF-203ENST00000511412 NFATC2IPQ8NCF5 419 aa33.39■■■□□ 2.94
ALYREF-203ENST00000511412 VIRMAQ69YN4 1812 aaKnown RBP33.39■■■□□ 2.94
ALYREF-203ENST00000511412 RC3H1Q5TC82 1133 aaKnown RBP33.38■■■□□ 2.93
ALYREF-203ENST00000511412 TJP1Q07157 1748 aa33.38■■■□□ 2.93
ALYREF-203ENST00000511412 COL3A1P02461 1466 aaPredicted RBP33.37■■■□□ 2.93
ALYREF-203ENST00000511412 MRC1P22897 1456 aa33.37■■■□□ 2.93
ALYREF-203ENST00000511412 C4AP0C0L4 1744 aa33.36■■■□□ 2.93
ALYREF-203ENST00000511412 PTCD1O75127 700 aaKnown RBP33.36■■■□□ 2.93
ALYREF-203ENST00000511412 ADRA2BP18089 450 aa33.36■■■□□ 2.93
ALYREF-203ENST00000511412 TRAPPC3LQ5T215 181 aa33.36■■■□□ 2.93
ALYREF-203ENST00000511412 CNGB1Q14028 1251 aaPredicted RBP33.35■■■□□ 2.93
ALYREF-203ENST00000511412 MYH14Q7Z406 1995 aaKnown RBP33.34■■■□□ 2.93
ALYREF-203ENST00000511412 ADAMTS7Q9UKP4 1686 aa33.33■■■□□ 2.93
ALYREF-203ENST00000511412 RPS6KA4O75676 772 aa33.32■■■□□ 2.92
ALYREF-203ENST00000511412 SLC52A2Q9HAB3 445 aa33.32■■■□□ 2.92
ALYREF-203ENST00000511412 MMP10P09238 476 aa33.31■■■□□ 2.92
ALYREF-203ENST00000511412 ARHGEF1Q92888 912 aaKnown RBP33.3■■■□□ 2.92
ALYREF-203ENST00000511412 KIF13BQ9NQT8 1826 aa33.29■■■□□ 2.92
ALYREF-203ENST00000511412 RNMTO43148 476 aaKnown RBP33.28■■■□□ 2.92
ALYREF-203ENST00000511412 RFC4P35249 363 aa33.28■■■□□ 2.92
ALYREF-203ENST00000511412 CRKLP46109 303 aaKnown RBP33.28■■■□□ 2.92
ALYREF-203ENST00000511412 MTHFSDQ2M296 383 aaKnown RBP33.28■■■□□ 2.92
ALYREF-203ENST00000511412 NLGN1Q8N2Q7 840 aa33.28■■■□□ 2.92
ALYREF-203ENST00000511412 LGR6Q9HBX8 967 aa33.28■■■□□ 2.92
ALYREF-203ENST00000511412 U2SURPO15042 1029 aaKnown RBP33.24■■■□□ 2.91
ALYREF-203ENST00000511412 GYS1P13807 737 aa33.24■■■□□ 2.91
ALYREF-203ENST00000511412 KCPQ6ZWJ8 1503 aa33.23■■■□□ 2.91
ALYREF-203ENST00000511412 KIAA1551Q9HCM1 1747 aa33.23■■■□□ 2.91
ALYREF-203ENST00000511412 C10orf71Q711Q0 1435 aa33.22■■■□□ 2.91
ALYREF-203ENST00000511412 WWC3Q9ULE0 1092 aa33.22■■■□□ 2.91
ALYREF-203ENST00000511412 PXDNLA1KZ92 1463 aa33.21■■■□□ 2.91
ALYREF-203ENST00000511412 UBR2Q8IWV8 1755 aa33.2■■■□□ 2.91
ALYREF-203ENST00000511412 SLC39A6Q13433 755 aa33.19■■■□□ 2.9
ALYREF-203ENST00000511412 DNAJC10Q8IXB1 793 aa33.19■■■□□ 2.9
ALYREF-203ENST00000511412 N4BP2Q86UW6 1770 aaPredicted RBP33.19■■■□□ 2.9
ALYREF-203ENST00000511412 CFAP53Q96M91 514 aa33.17■■■□□ 2.9
ALYREF-203ENST00000511412 CCDC87Q9NVE4 849 aa33.17■■■□□ 2.9
ALYREF-203ENST00000511412 PARP3Q9Y6F1 533 aa33.17■■■□□ 2.9
ALYREF-203ENST00000511412 USP42Q9H9J4 1324 aaKnown RBP33.17■■■□□ 2.9
ALYREF-203ENST00000511412 INTS5Q6P9B9 1019 aaKnown RBP33.16■■■□□ 2.9
ALYREF-203ENST00000511412 GAS2L2Q8NHY3 880 aa33.16■■■□□ 2.9
ALYREF-203ENST00000511412 SRP68Q9UHB9 627 aaKnown RBP33.15■■■□□ 2.9
ALYREF-203ENST00000511412 TGFB2P61812 414 aa33.14■■■□□ 2.9
ALYREF-203ENST00000511412 ATP10DQ9P241 1426 aa33.13■■■□□ 2.89
ALYREF-203ENST00000511412 GIGYF1O75420 1035 aaPredicted RBP33.13■■■□□ 2.89
ALYREF-203ENST00000511412 SIPA1L3O60292 1781 aaPredicted RBP33.12■■■□□ 2.89
ALYREF-203ENST00000511412 SOS1Q07889 1333 aaPredicted RBP33.11■■■□□ 2.89
ALYREF-203ENST00000511412 GNAT3A8MTJ3 354 aa33.11■■■□□ 2.89
ALYREF-203ENST00000511412 CYP19A1P11511 503 aaPredicted RBP33.11■■■□□ 2.89
ALYREF-203ENST00000511412 ADCY9O60503 1353 aa33.1■■■□□ 2.89
ALYREF-203ENST00000511412 C1QTNF8P60827 252 aa33.1■■■□□ 2.89
ALYREF-203ENST00000511412 FKBP8Q14318 412 aa33.1■■■□□ 2.89
ALYREF-203ENST00000511412 TTC5Q8N0Z6 440 aa33.1■■■□□ 2.89
ALYREF-203ENST00000511412 VSIG10Q8N0Z9 540 aa33.1■■■□□ 2.89
ALYREF-203ENST00000511412 TEFQ10587 303 aa33.09■■■□□ 2.89
ALYREF-203ENST00000511412 BRCA1P38398 1863 aaKnown RBP33.09■■■□□ 2.89
ALYREF-203ENST00000511412 COL15A1P39059 1388 aa33.08■■■□□ 2.89
ALYREF-203ENST00000511412 PRKAR2BP31323 418 aa33.07■■■□□ 2.88
ALYREF-203ENST00000511412 NUDCQ9Y266 331 aa33.07■■■□□ 2.88
ALYREF-203ENST00000511412 A0A0G2JLW4 131 aa33.06■■■□□ 2.88
ALYREF-203ENST00000511412 ZPR1O75312 459 aa33.06■■■□□ 2.88
ALYREF-203ENST00000511412 PPP2R1AP30153 589 aa33.06■■■□□ 2.88
ALYREF-203ENST00000511412 IL17REQ8NFR9 667 aa33.06■■■□□ 2.88
ALYREF-203ENST00000511412 RSPH6AQ9H0K4 717 aa33.06■■■□□ 2.88
ALYREF-203ENST00000511412 ZBTB1Q9Y2K1 713 aa33.06■■■□□ 2.88
ALYREF-203ENST00000511412 DDR1Q08345 913 aa33.05■■■□□ 2.88
ALYREF-203ENST00000511412 USPL1Q5W0Q7 1092 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms