RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-208	ENST00000511248	SIK1	P57059	783 aa		13.96	□□□□□ -0.17
PRKAA1-208	ENST00000511248	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	3e-10	■□□□□ 10.1
PRKAA1-208	ENST00000511248	TMOD3	Q9NYL9	352 aa		13.95	□□□□□ -0.18
PRKAA1-208	ENST00000511248	ASAP1	Q9ULH1	1129 aa		13.95	□□□□□ -0.18
PRKAA1-208	ENST00000511248	PHKG2	P15735	406 aa		13.94	□□□□□ -0.18
PRKAA1-208	ENST00000511248	HSPA6	P17066	643 aa		13.94	□□□□□ -0.18
PRKAA1-208	ENST00000511248	TNNT2	P45379	298 aa	Predicted RBP	13.94	□□□□□ -0.18
PRKAA1-208	ENST00000511248	ITPK1	Q13572	414 aa		13.94	□□□□□ -0.18
PRKAA1-208	ENST00000511248	UBR3	Q6ZT12	1888 aa		13.94	□□□□□ -0.18
PRKAA1-208	ENST00000511248	MAP2	P11137	1827 aa	Known RBP	13.94	□□□□□ -0.18
PRKAA1-208	ENST00000511248	SSFA2	P28290	1259 aa		13.93	□□□□□ -0.18
PRKAA1-208	ENST00000511248	EIF4A2	Q14240	407 aa	Known RBP	13.93	□□□□□ -0.18
PRKAA1-208	ENST00000511248	ADCY9	O60503	1353 aa		13.93	□□□□□ -0.18
PRKAA1-208	ENST00000511248	GNPAT	O15228	680 aa		13.92	□□□□□ -0.18
PRKAA1-208	ENST00000511248	IFNL2	Q8IZJ0	200 aa		13.92	□□□□□ -0.18
PRKAA1-208	ENST00000511248	POLR3GL	Q9BT43	218 aa		13.92	□□□□□ -0.18
PRKAA1-208	ENST00000511248	ATG3	Q9NT62	314 aa		13.92	□□□□□ -0.18
PRKAA1-208	ENST00000511248	IGSF1	Q8N6C5	1336 aa		13.91	□□□□□ -0.18
PRKAA1-208	ENST00000511248	ATP6V1A	P38606	617 aa		13.91	□□□□□ -0.18
PRKAA1-208	ENST00000511248	WWC3	Q9ULE0	1092 aa		13.91	□□□□□ -0.18
PRKAA1-208	ENST00000511248	KDR	P35968	1356 aa		13.9	□□□□□ -0.18
PRKAA1-208	ENST00000511248	PLEKHG2	Q9H7P9	1386 aa		13.89	□□□□□ -0.19
PRKAA1-208	ENST00000511248	ZNF526	Q8TF50	670 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKAA1-208	ENST00000511248	SLC4A9	Q96Q91	983 aa		13.89	□□□□□ -0.19
PRKAA1-208	ENST00000511248	MMP10	P09238	476 aa		13.88	□□□□□ -0.19
PRKAA1-208	ENST00000511248	KIF3C	O14782	793 aa		13.87	□□□□□ -0.19
PRKAA1-208	ENST00000511248	TGFB2	P61812	414 aa		13.87	□□□□□ -0.19
PRKAA1-208	ENST00000511248	PANK3	Q9H999	370 aa		13.87	□□□□□ -0.19
PRKAA1-208	ENST00000511248	KDM6A	O15550	1401 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKAA1-208	ENST00000511248	ERVV-2	B6SEH9	535 aa		13.86	□□□□□ -0.19
PRKAA1-208	ENST00000511248	DCAF5	Q96JK2	942 aa		13.86	□□□□□ -0.19
PRKAA1-208	ENST00000511248	HSPA5	P11021	654 aa	Known RBP	13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	TRAPPC3L	Q5T215	181 aa		13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	DIEXF	Q68CQ4	756 aa	Known RBP	13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	AEBP1	Q8IUX7	1158 aa		13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	NLGN1	Q8N2Q7	840 aa		13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	RBM42	Q9BTD8	480 aa	Known RBP	13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	PXDNL	A1KZ92	1463 aa		13.85	□□□□□ -0.19
PRKAA1-208	ENST00000511248	CIC	Q96RK0	1608 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	TOMM70	O94826	608 aa		13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	HSP90AB1	P08238	724 aa	Known RBP	13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	APLP1	P51693	650 aa		13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	RTCB	Q9Y3I0	505 aa	Known RBP	13.84	□□□□□ -0.19
PRKAA1-208	ENST00000511248	ZNF831	Q5JPB2	1677 aa		13.83	□□□□□ -0.2
PRKAA1-208	ENST00000511248	RC3H1	Q5TC82	1133 aa	Known RBP	13.83	□□□□□ -0.2
PRKAA1-208	ENST00000511248	ARHGEF1	Q92888	912 aa	Known RBP	13.83	□□□□□ -0.2
PRKAA1-208	ENST00000511248	CNTNAP4	Q9C0A0	1308 aa		13.83	□□□□□ -0.2
PRKAA1-208	ENST00000511248	C10orf71	Q711Q0	1435 aa		13.82	□□□□□ -0.2
PRKAA1-208	ENST00000511248	COL5A3	P25940	1745 aa	Predicted RBP	13.82	□□□□□ -0.2
PRKAA1-208	ENST00000511248	CABP4	P57796	275 aa		13.82	□□□□□ -0.2
PRKAA1-208	ENST00000511248	AMOT	Q4VCS5	1084 aa		13.82	□□□□□ -0.2
PRKAA1-208	ENST00000511248	KIAA1551	Q9HCM1	1747 aa		13.81	□□□□□ -0.2
PRKAA1-208	ENST00000511248		A0A0G2JLW4	131 aa		13.81	□□□□□ -0.2
PRKAA1-208	ENST00000511248	GYS1	P13807	737 aa		13.81	□□□□□ -0.2
PRKAA1-208	ENST00000511248	MTHFS	P49914	203 aa		13.81	□□□□□ -0.2
PRKAA1-208	ENST00000511248	MORC1	Q86VD1	984 aa		13.81	□□□□□ -0.2
PRKAA1-208	ENST00000511248	KIF13B	Q9NQT8	1826 aa		13.8	□□□□□ -0.2
PRKAA1-208	ENST00000511248	PTCD1	O75127	700 aa	Known RBP	13.8	□□□□□ -0.2
PRKAA1-208	ENST00000511248	RPS6KA4	O75676	772 aa		13.8	□□□□□ -0.2
PRKAA1-208	ENST00000511248	RFC4	P35249	363 aa		13.8	□□□□□ -0.2
PRKAA1-208	ENST00000511248	CCDC87	Q9NVE4	849 aa		13.8	□□□□□ -0.2
PRKAA1-208	ENST00000511248	BCS1L	Q9Y276	419 aa		13.8	□□□□□ -0.2
PRKAA1-208	ENST00000511248	C4A	P0C0L4	1744 aa		13.79	□□□□□ -0.2
PRKAA1-208	ENST00000511248	DPEP1	P16444	411 aa		13.79	□□□□□ -0.2
PRKAA1-208	ENST00000511248	C1orf141	Q5JVX7	400 aa		13.79	□□□□□ -0.2
PRKAA1-208	ENST00000511248	SULT6B1	Q6IMI4	303 aa		13.79	□□□□□ -0.2
PRKAA1-208	ENST00000511248	ARHGAP27	Q6ZUM4	889 aa		13.79	□□□□□ -0.2
PRKAA1-208	ENST00000511248	NFATC2IP	Q8NCF5	419 aa		13.79	□□□□□ -0.2
PRKAA1-208	ENST00000511248	IL13	P35225	146 aa		13.78	□□□□□ -0.2
PRKAA1-208	ENST00000511248	CRKL	P46109	303 aa	Known RBP	13.78	□□□□□ -0.2
PRKAA1-208	ENST00000511248	DNAJC5G	Q8N7S2	189 aa		13.78	□□□□□ -0.2
PRKAA1-208	ENST00000511248	PARP3	Q9Y6F1	533 aa		13.78	□□□□□ -0.2
PRKAA1-208	ENST00000511248	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.78	□□□□□ -0.2
PRKAA1-208	ENST00000511248	SRP68	Q9UHB9	627 aa	Known RBP	13.77	□□□□□ -0.21
PRKAA1-208	ENST00000511248	MYH14	Q7Z406	1995 aa	Known RBP	13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	USP42	Q9H9J4	1324 aa	Known RBP	13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	FCHSD2	O94868	740 aa		13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	KCNA3	P22001	575 aa		13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	DDR1	Q08345	913 aa		13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	FKBP8	Q14318	412 aa		13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	RBM46	Q8TBY0	533 aa	Known RBP	13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	KNSTRN	Q9Y448	316 aa		13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	TJP1	Q07157	1748 aa		13.76	□□□□□ -0.21
PRKAA1-208	ENST00000511248	INTS5	Q6P9B9	1019 aa	Known RBP	13.75	□□□□□ -0.21
PRKAA1-208	ENST00000511248	PIM2	Q9P1W9	311 aa		13.75	□□□□□ -0.21
PRKAA1-208	ENST00000511248	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKAA1-208	ENST00000511248	NMRK2	Q9NPI5	230 aa		13.74	□□□□□ -0.21
PRKAA1-208	ENST00000511248	FSTL1	Q12841	308 aa		13.73	□□□□□ -0.21
PRKAA1-208	ENST00000511248	AKAP4	Q5JQC9	854 aa		13.73	□□□□□ -0.21
PRKAA1-208	ENST00000511248	C9orf131	Q5VYM1	1079 aa		13.73	□□□□□ -0.21
PRKAA1-208	ENST00000511248	RNF39	Q9H2S5	420 aa		13.73	□□□□□ -0.21
PRKAA1-208	ENST00000511248	LGR6	Q9HBX8	967 aa		13.73	□□□□□ -0.21
PRKAA1-208	ENST00000511248	ADAMTS7	Q9UKP4	1686 aa		13.72	□□□□□ -0.21
PRKAA1-208	ENST00000511248	BRCA1	P38398	1863 aa	Known RBP	13.72	□□□□□ -0.21
PRKAA1-208	ENST00000511248	KDM2B	Q8NHM5	1336 aa		13.72	□□□□□ -0.21
PRKAA1-208	ENST00000511248	DNAJC10	Q8IXB1	793 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms