RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 RTL1A6NKG5 1358 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 SPATA31A1Q5TZJ5 1347 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 SPATA31A5Q5VU36 1347 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 SPATA31A7Q8IWB4 1347 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 VPS72Q15906 364 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 ZNF772Q68DY9 489 aaPredicted RBP7.22□□□□□ -1.25
PROM1-211ENST00000511153 LHX8Q68G74 356 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 DPY19L2Q6NUT2 758 aa7.22□□□□□ -1.25
PROM1-211ENST00000511153 DDX54Q8TDD1 881 aaKnown RBP7.22□□□□□ -1.25
PROM1-211ENST00000511153 CRB1P82279 1406 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 POTEIP0CG38 1075 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 RXRBP28702 533 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.25
PROM1-211ENST00000511153 WDR43Q15061 677 aaKnown RBP eCLIP7.21□□□□□ -1.25
PROM1-211ENST00000511153 NEUROD2Q15784 382 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 VSIG10Q8N0Z9 540 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 TCP11L2Q8N4U5 519 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 CARD10Q9BWT7 1032 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 ADAMTS8Q9UP79 889 aa7.21□□□□□ -1.25
PROM1-211ENST00000511153 RRP7AQ9Y3A4 280 aaKnown RBP7.21□□□□□ -1.25
PROM1-211ENST00000511153 MEGF6O75095 1541 aa7.21□□□□□ -1.26
PROM1-211ENST00000511153 PRKAR2BP31323 418 aa7.2□□□□□ -1.26
PROM1-211ENST00000511153 ASTLQ6HA08 431 aaPredicted RBP7.2□□□□□ -1.26
PROM1-211ENST00000511153 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
PROM1-211ENST00000511153 NUDCQ9Y266 331 aa7.2□□□□□ -1.26
PROM1-211ENST00000511153 BRWD3Q6RI45 1802 aa7.2□□□□□ -1.26
PROM1-211ENST00000511153 FAM208AQ9UK61 1670 aaKnown RBP7.2□□□□□ -1.26
PROM1-211ENST00000511153 RAPGEF4Q8WZA2 1011 aa7.2□□□□□ -1.26
PROM1-211ENST00000511153 PHACTR3Q96KR7 559 aa7.2□□□□□ -1.26
PROM1-211ENST00000511153 YTHDC1Q96MU7 727 aaKnown RBP7.2□□□□□ -1.26
PROM1-211ENST00000511153 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.19□□□□□ -1.26
PROM1-211ENST00000511153 IGSF1Q8N6C5 1336 aa7.19□□□□□ -1.26
PROM1-211ENST00000511153 IL2RBP14784 551 aa7.19□□□□□ -1.26
PROM1-211ENST00000511153 TATP17735 454 aaPredicted RBP7.19□□□□□ -1.26
PROM1-211ENST00000511153 RBM6P78332 1123 aaKnown RBP7.19□□□□□ -1.26
PROM1-211ENST00000511153 ACSBG1Q96GR2 724 aa7.19□□□□□ -1.26
PROM1-211ENST00000511153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.19□□□□□ -1.26
PROM1-211ENST00000511153 RGPD1P0DJD0 1748 aa7.19□□□□□ -1.26
PROM1-211ENST00000511153 RGS12O14924 1447 aa7.19□□□□□ -1.26
PROM1-211ENST00000511153 WNK3Q9BYP7 1800 aa7.18□□□□□ -1.26
PROM1-211ENST00000511153 CLCN6P51797 869 aa7.18□□□□□ -1.26
PROM1-211ENST00000511153 DCTN1Q14203 1278 aa7.18□□□□□ -1.26
PROM1-211ENST00000511153 DDB1Q16531 1140 aa7.18□□□□□ -1.26
PROM1-211ENST00000511153 THUMPD2Q9BTF0 503 aaKnown RBP7.18□□□□□ -1.26
PROM1-211ENST00000511153 RSPH6AQ9H0K4 717 aa7.18□□□□□ -1.26
PROM1-211ENST00000511153 MTHFSDQ2M296 383 aaKnown RBP7.17□□□□□ -1.26
PROM1-211ENST00000511153 ZNF530Q6P9A1 599 aaPredicted RBP7.17□□□□□ -1.26
PROM1-211ENST00000511153 PTF1AQ7RTS3 328 aa7.17□□□□□ -1.26
PROM1-211ENST00000511153 PNISRQ8TF01 805 aaKnown RBP7.17□□□□□ -1.26
PROM1-211ENST00000511153 DCBLD2Q96PD2 775 aa7.17□□□□□ -1.26
PROM1-211ENST00000511153 RYDENQ9NUL5 291 aaKnown RBP7.17□□□□□ -1.26
PROM1-211ENST00000511153 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
PROM1-211ENST00000511153 ABCC6O95255 1503 aa7.17□□□□□ -1.26
PROM1-211ENST00000511153 LRRC37A3O60309 1634 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 EXOC5O00471 708 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 APAF1O14727 1248 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 PDE3BQ13370 1112 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 TPRNQ4KMQ1 711 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 MPRIPQ6WCQ1 1025 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 MARCH10Q8NA82 808 aaPredicted RBP7.16□□□□□ -1.26
PROM1-211ENST00000511153 ZCRB1Q8TBF4 217 aaKnown RBP7.16□□□□□ -1.26
PROM1-211ENST00000511153 SYTL4Q96C24 671 aaPredicted RBP7.16□□□□□ -1.26
PROM1-211ENST00000511153 MAPK8IP3Q9UPT6 1336 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 DISP2A7MBM2 1401 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 CYP27B1O15528 508 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 IRX5P78411 483 aaPredicted RBP7.16□□□□□ -1.26
PROM1-211ENST00000511153 MCM10Q7L590 875 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 PDCD7Q8N8D1 485 aaKnown RBP7.16□□□□□ -1.26
PROM1-211ENST00000511153 SHANK3Q9BYB0 1731 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 COLQQ9Y215 455 aaPredicted RBP7.16□□□□□ -1.26
PROM1-211ENST00000511153 EP400Q96L91 3159 aa7.16□□□□□ -1.26
PROM1-211ENST00000511153 PARP4Q9UKK3 1724 aaKnown RBP7.15□□□□□ -1.26
PROM1-211ENST00000511153 OVOS2A0A0G2JMS6 1433 aa7.15□□□□□ -1.27
PROM1-211ENST00000511153 CCER2I3L3R5 266 aa7.15□□□□□ -1.27
PROM1-211ENST00000511153 KCNQ2O43526 872 aa7.15□□□□□ -1.27
PROM1-211ENST00000511153 PLEKHO1Q53GL0 409 aaPredicted RBP7.15□□□□□ -1.27
PROM1-211ENST00000511153 BARGINQ6ZT62 677 aa7.15□□□□□ -1.27
PROM1-211ENST00000511153 PLEKHF1Q96S99 279 aa7.15□□□□□ -1.27
PROM1-211ENST00000511153 LGR6Q9HBX8 967 aa7.15□□□□□ -1.27
PROM1-211ENST00000511153 THRAP3Q9Y2W1 955 aaKnown RBP7.15□□□□□ -1.27
PROM1-211ENST00000511153 DLG5Q8TDM6 1919 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 THSD7AQ9UPZ6 1657 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 POTEFA5A3E0 1075 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 TRIM37O94972 964 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 NEFMP07197 916 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 C1orf141Q5JVX7 400 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 SPG7Q9UQ90 795 aa7.14□□□□□ -1.27
PROM1-211ENST00000511153 LAS1LQ9Y4W2 734 aaKnown RBP7.14□□□□□ -1.27
PROM1-211ENST00000511153 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 FCHSD2O94868 740 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 PHKG2P15735 406 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 PRIM1P49642 420 aaKnown RBP7.13□□□□□ -1.27
PROM1-211ENST00000511153 KCNQ4P56696 695 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 RIPK4P57078 832 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 MIS18AQ9NYP9 233 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 VIRMAQ69YN4 1812 aaKnown RBP7.13□□□□□ -1.27
PROM1-211ENST00000511153 NCAPD2Q15021 1401 aa7.13□□□□□ -1.27
PROM1-211ENST00000511153 TMPOP42166 694 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms