RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 LOC102724428A0A0B4J2F2 783 aa16.43■□□□□ 0.22
CLDND1-223ENST00000511081 SIK1P57059 783 aa16.43■□□□□ 0.22
CLDND1-223ENST00000511081 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-223ENST00000511081 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-223ENST00000511081 C5P01031 1676 aa16.43■□□□□ 0.22
CLDND1-223ENST00000511081 UTRNP46939 3433 aa16.42■□□□□ 0.22
CLDND1-223ENST00000511081 DSG3P32926 999 aa16.42■□□□□ 0.22
CLDND1-223ENST00000511081 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
CLDND1-223ENST00000511081 ARXQ96QS3 562 aa16.42■□□□□ 0.22
CLDND1-223ENST00000511081 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
CLDND1-223ENST00000511081 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
CLDND1-223ENST00000511081 MAP3K5Q99683 1374 aa16.41■□□□□ 0.22
CLDND1-223ENST00000511081 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
CLDND1-223ENST00000511081 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
CLDND1-223ENST00000511081 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
CLDND1-223ENST00000511081 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-223ENST00000511081 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
CLDND1-223ENST00000511081 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
CLDND1-223ENST00000511081 ITPK1Q13572 414 aa16.39■□□□□ 0.21
CLDND1-223ENST00000511081 POTEHQ6S545 545 aa16.39■□□□□ 0.21
CLDND1-223ENST00000511081 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
CLDND1-223ENST00000511081 HMOX1P09601 288 aa16.38■□□□□ 0.21
CLDND1-223ENST00000511081 CABP4P57796 275 aa16.38■□□□□ 0.21
CLDND1-223ENST00000511081 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
CLDND1-223ENST00000511081 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
CLDND1-223ENST00000511081 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
CLDND1-223ENST00000511081 CAPN15O75808 1086 aa16.37■□□□□ 0.21
CLDND1-223ENST00000511081 POLD1P28340 1107 aa16.37■□□□□ 0.21
CLDND1-223ENST00000511081 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
CLDND1-223ENST00000511081 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
CLDND1-223ENST00000511081 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
CLDND1-223ENST00000511081 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
CLDND1-223ENST00000511081 SSFA2P28290 1259 aa16.36■□□□□ 0.21
CLDND1-223ENST00000511081 PPP2R1AP30153 589 aa16.36■□□□□ 0.21
CLDND1-223ENST00000511081 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
CLDND1-223ENST00000511081 AK7Q96M32 723 aa16.36■□□□□ 0.21
CLDND1-223ENST00000511081 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
CLDND1-223ENST00000511081 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
CLDND1-223ENST00000511081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
CLDND1-223ENST00000511081 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
CLDND1-223ENST00000511081 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-223ENST00000511081 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
CLDND1-223ENST00000511081 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
CLDND1-223ENST00000511081 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
CLDND1-223ENST00000511081 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
CLDND1-223ENST00000511081 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
CLDND1-223ENST00000511081 CNTNAP4Q9C0A0 1308 aa16.31■□□□□ 0.2
CLDND1-223ENST00000511081 RPS6KA4O75676 772 aa16.31■□□□□ 0.2
CLDND1-223ENST00000511081 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-223ENST00000511081 MRC1P22897 1456 aa16.3■□□□□ 0.2
CLDND1-223ENST00000511081 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
CLDND1-223ENST00000511081 GNPATO15228 680 aa16.3■□□□□ 0.2
CLDND1-223ENST00000511081 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
CLDND1-223ENST00000511081 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
CLDND1-223ENST00000511081 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
CLDND1-223ENST00000511081 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
CLDND1-223ENST00000511081 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CLDND1-223ENST00000511081 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
CLDND1-223ENST00000511081 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
CLDND1-223ENST00000511081 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
CLDND1-223ENST00000511081 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-223ENST00000511081 FCHSD2O94868 740 aa16.28■□□□□ 0.2
CLDND1-223ENST00000511081 PHF14O94880 888 aa16.28■□□□□ 0.2
CLDND1-223ENST00000511081 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
CLDND1-223ENST00000511081 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
CLDND1-223ENST00000511081 CD2APQ9Y5K6 639 aa16.28■□□□□ 0.2
CLDND1-223ENST00000511081 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
CLDND1-223ENST00000511081 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
CLDND1-223ENST00000511081 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
CLDND1-223ENST00000511081 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
CLDND1-223ENST00000511081 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
CLDND1-223ENST00000511081 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
CLDND1-223ENST00000511081 CRKLP46109 303 aaKnown RBP16.25■□□□□ 0.19
CLDND1-223ENST00000511081 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
CLDND1-223ENST00000511081 NLGN1Q8N2Q7 840 aa16.25■□□□□ 0.19
CLDND1-223ENST00000511081 TJP1Q07157 1748 aa16.25■□□□□ 0.19
CLDND1-223ENST00000511081 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
CLDND1-223ENST00000511081 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
CLDND1-223ENST00000511081 YY1P25490 414 aa16.24■□□□□ 0.19
CLDND1-223ENST00000511081 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLDND1-223ENST00000511081 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-223ENST00000511081 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
CLDND1-223ENST00000511081 KCPQ6ZWJ8 1503 aa16.23■□□□□ 0.19
CLDND1-223ENST00000511081 GYS1P13807 737 aa16.22■□□□□ 0.19
CLDND1-223ENST00000511081 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.19
CLDND1-223ENST00000511081 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.19
CLDND1-223ENST00000511081 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
CLDND1-223ENST00000511081 RFC4P35249 363 aa16.21■□□□□ 0.19
CLDND1-223ENST00000511081 TEFQ10587 303 aa16.21■□□□□ 0.19
CLDND1-223ENST00000511081 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
CLDND1-223ENST00000511081 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
CLDND1-223ENST00000511081 CHD4Q14839 1912 aa16.2■□□□□ 0.18
CLDND1-223ENST00000511081 MMP10P09238 476 aa16.2■□□□□ 0.18
CLDND1-223ENST00000511081 RALBP1Q15311 655 aa16.2■□□□□ 0.18
CLDND1-223ENST00000511081 GPR162Q16538 588 aa16.2■□□□□ 0.18
CLDND1-223ENST00000511081 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
CLDND1-223ENST00000511081 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
CLDND1-223ENST00000511081 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLDND1-223ENST00000511081 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
CLDND1-223ENST00000511081 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms