RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
CHFR-208ENST00000511001 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.21
CHFR-208ENST00000511001 ITPK1Q13572 414 aa16.33■□□□□ 0.2
CHFR-208ENST00000511001 CNGB1Q14028 1251 aaPredicted RBP16.33■□□□□ 0.2
CHFR-208ENST00000511001 LINC00116Q8NCU8 138 aa16.33■□□□□ 0.2
CHFR-208ENST00000511001 MAP3K5Q99683 1374 aa16.33■□□□□ 0.2
CHFR-208ENST00000511001 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.2
CHFR-208ENST00000511001 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
CHFR-208ENST00000511001 HMOX1P09601 288 aa16.32■□□□□ 0.2
CHFR-208ENST00000511001 SLC4A9Q96Q91 983 aa16.32■□□□□ 0.2
CHFR-208ENST00000511001 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
CHFR-208ENST00000511001 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
CHFR-208ENST00000511001 SMIM5Q71RC9 77 aa16.31■□□□□ 0.2
CHFR-208ENST00000511001 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
CHFR-208ENST00000511001 SENP3-EIF4A1A0A087X0R7 540 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 MSH5O43196 834 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 POLD1P28340 1107 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 CABP4P57796 275 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 AK7Q96M32 723 aa16.29■□□□□ 0.2
CHFR-208ENST00000511001 TJP1Q07157 1748 aa16.28■□□□□ 0.2
CHFR-208ENST00000511001 CICQ96RK0 1608 aaPredicted RBP16.28■□□□□ 0.2
CHFR-208ENST00000511001 AKAP4Q5JQC9 854 aa16.28■□□□□ 0.2
CHFR-208ENST00000511001 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
CHFR-208ENST00000511001 MRC1P22897 1456 aa16.28■□□□□ 0.2
CHFR-208ENST00000511001 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.2
CHFR-208ENST00000511001 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
CHFR-208ENST00000511001 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
CHFR-208ENST00000511001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
CHFR-208ENST00000511001 SSFA2P28290 1259 aa16.26■□□□□ 0.19
CHFR-208ENST00000511001 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
CHFR-208ENST00000511001 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
CHFR-208ENST00000511001 PHF14O94880 888 aa16.25■□□□□ 0.19
CHFR-208ENST00000511001 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
CHFR-208ENST00000511001 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
CHFR-208ENST00000511001 GNPATO15228 680 aa16.24■□□□□ 0.19
CHFR-208ENST00000511001 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
CHFR-208ENST00000511001 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
CHFR-208ENST00000511001 C1QTNF8P60827 252 aa16.23■□□□□ 0.19
CHFR-208ENST00000511001 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
CHFR-208ENST00000511001 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
CHFR-208ENST00000511001 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
CHFR-208ENST00000511001 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
CHFR-208ENST00000511001 CNTNAP4Q9C0A0 1308 aa16.22■□□□□ 0.19
CHFR-208ENST00000511001 PTCD1O75127 700 aaKnown RBP16.22■□□□□ 0.19
CHFR-208ENST00000511001 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
CHFR-208ENST00000511001 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
CHFR-208ENST00000511001 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
CHFR-208ENST00000511001 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
CHFR-208ENST00000511001 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
CHFR-208ENST00000511001 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
CHFR-208ENST00000511001 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
CHFR-208ENST00000511001 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
CHFR-208ENST00000511001 KIF13BQ9NQT8 1826 aa16.18■□□□□ 0.18
CHFR-208ENST00000511001 ARHGEF1Q92888 912 aaKnown RBP16.18■□□□□ 0.18
CHFR-208ENST00000511001 PHACTR3Q96KR7 559 aa16.18■□□□□ 0.18
CHFR-208ENST00000511001 ADRA2BP18089 450 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
CHFR-208ENST00000511001 GPR162Q16538 588 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 DNAJC10Q8IXB1 793 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
CHFR-208ENST00000511001 KIAA1551Q9HCM1 1747 aa16.16■□□□□ 0.18
CHFR-208ENST00000511001 DLG5Q8TDM6 1919 aa16.16■□□□□ 0.18
CHFR-208ENST00000511001 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
CHFR-208ENST00000511001 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
CHFR-208ENST00000511001 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
CHFR-208ENST00000511001 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
CHFR-208ENST00000511001 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
CHFR-208ENST00000511001 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
CHFR-208ENST00000511001 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
CHFR-208ENST00000511001 GYS1P13807 737 aa16.14■□□□□ 0.17
CHFR-208ENST00000511001 U2AF1Q01081 240 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHFR-208ENST00000511001 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
CHFR-208ENST00000511001 MMP10P09238 476 aa16.13■□□□□ 0.17
CHFR-208ENST00000511001 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
CHFR-208ENST00000511001 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHFR-208ENST00000511001 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
CHFR-208ENST00000511001 FCHSD2O94868 740 aa16.12■□□□□ 0.17
CHFR-208ENST00000511001 RFC4P35249 363 aa16.12■□□□□ 0.17
CHFR-208ENST00000511001 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
CHFR-208ENST00000511001 NLGN1Q8N2Q7 840 aa16.11■□□□□ 0.17
CHFR-208ENST00000511001 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
CHFR-208ENST00000511001 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
CHFR-208ENST00000511001 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
CHFR-208ENST00000511001 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
CHFR-208ENST00000511001 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
CHFR-208ENST00000511001 TEFQ10587 303 aa16.1■□□□□ 0.17
CHFR-208ENST00000511001 ZBTB1Q9Y2K1 713 aa16.1■□□□□ 0.17
CHFR-208ENST00000511001 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
CHFR-208ENST00000511001 AFDNP55196 1824 aaKnown RBP16.1■□□□□ 0.17
CHFR-208ENST00000511001 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
CHFR-208ENST00000511001 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
CHFR-208ENST00000511001 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
CHFR-208ENST00000511001 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
CHFR-208ENST00000511001 KCNQ3O43525 872 aa16.08■□□□□ 0.16
CHFR-208ENST00000511001 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms