RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 PKD1L3Q7Z443 1732 aa11.83□□□□□ -0.52
PDGFC-206ENST00000510982 C5P01031 1676 aa11.82□□□□□ -0.52
PDGFC-206ENST00000510982 MTHFSP49914 203 aa11.82□□□□□ -0.52
PDGFC-206ENST00000510982 CABP4P57796 275 aa11.82□□□□□ -0.52
PDGFC-206ENST00000510982 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
PDGFC-206ENST00000510982 COL24A1Q17RW2 1714 aa11.82□□□□□ -0.52
PDGFC-206ENST00000510982 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
PDGFC-206ENST00000510982 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
PDGFC-206ENST00000510982 ANKRD26Q9UPS8 1709 aa11.81□□□□□ -0.52
PDGFC-206ENST00000510982 C1orf141Q5JVX7 400 aa11.81□□□□□ -0.52
PDGFC-206ENST00000510982 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
PDGFC-206ENST00000510982 SULT6B1Q6IMI4 303 aa11.81□□□□□ -0.52
PDGFC-206ENST00000510982 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
PDGFC-206ENST00000510982 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
PDGFC-206ENST00000510982 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
PDGFC-206ENST00000510982 IL13P35225 146 aa11.79□□□□□ -0.52
PDGFC-206ENST00000510982 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
PDGFC-206ENST00000510982 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
PDGFC-206ENST00000510982 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
PDGFC-206ENST00000510982 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
PDGFC-206ENST00000510982 PTCD1O75127 700 aaKnown RBP11.78□□□□□ -0.52
PDGFC-206ENST00000510982 C1QTNF8P60827 252 aa11.78□□□□□ -0.52
PDGFC-206ENST00000510982 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
PDGFC-206ENST00000510982 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
PDGFC-206ENST00000510982 UTRNP46939 3433 aa11.78□□□□□ -0.52
PDGFC-206ENST00000510982 KIF7Q2M1P5 1343 aa11.78□□□□□ -0.52
PDGFC-206ENST00000510982 MMP10P09238 476 aa11.77□□□□□ -0.53
PDGFC-206ENST00000510982 RFC4P35249 363 aa11.77□□□□□ -0.53
PDGFC-206ENST00000510982 NLGN1Q8N2Q7 840 aa11.77□□□□□ -0.53
PDGFC-206ENST00000510982 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
PDGFC-206ENST00000510982 UBR3Q6ZT12 1888 aa11.76□□□□□ -0.53
PDGFC-206ENST00000510982 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
PDGFC-206ENST00000510982 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
PDGFC-206ENST00000510982 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
PDGFC-206ENST00000510982 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
PDGFC-206ENST00000510982 HMOX1P09601 288 aa11.75□□□□□ -0.53
PDGFC-206ENST00000510982 ADRA2BP18089 450 aa11.75□□□□□ -0.53
PDGFC-206ENST00000510982 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
PDGFC-206ENST00000510982 KDM6AO15550 1401 aaPredicted RBP11.75□□□□□ -0.53
PDGFC-206ENST00000510982 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
PDGFC-206ENST00000510982 AKAP4Q5JQC9 854 aa11.74□□□□□ -0.53
PDGFC-206ENST00000510982 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
PDGFC-206ENST00000510982 CNTNAP4Q9C0A0 1308 aa11.74□□□□□ -0.53
PDGFC-206ENST00000510982 KDRP35968 1356 aa11.74□□□□□ -0.53
PDGFC-206ENST00000510982 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
PDGFC-206ENST00000510982 GYS1P13807 737 aa11.73□□□□□ -0.53
PDGFC-206ENST00000510982 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
PDGFC-206ENST00000510982 A0A0G2JLW4 131 aa11.72□□□□□ -0.53
PDGFC-206ENST00000510982 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
PDGFC-206ENST00000510982 TGFB2P61812 414 aa11.72□□□□□ -0.53
PDGFC-206ENST00000510982 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
PDGFC-206ENST00000510982 PARP3Q9Y6F1 533 aa11.72□□□□□ -0.53
PDGFC-206ENST00000510982 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
PDGFC-206ENST00000510982 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.53
PDGFC-206ENST00000510982 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.53
PDGFC-206ENST00000510982 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.53
PDGFC-206ENST00000510982 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
PDGFC-206ENST00000510982 INTS5Q6P9B9 1019 aaKnown RBP11.7□□□□□ -0.54
PDGFC-206ENST00000510982 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
PDGFC-206ENST00000510982 ZNF526Q8TF50 670 aaPredicted RBP11.7□□□□□ -0.54
PDGFC-206ENST00000510982 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
PDGFC-206ENST00000510982 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
PDGFC-206ENST00000510982 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
PDGFC-206ENST00000510982 MYH14Q7Z406 1995 aaKnown RBP11.69□□□□□ -0.54
PDGFC-206ENST00000510982 DPEP1P16444 411 aa11.69□□□□□ -0.54
PDGFC-206ENST00000510982 GOLGB1Q14789 3259 aaKnown RBP11.68□□□□□ -0.54
PDGFC-206ENST00000510982 ZPR1O75312 459 aa11.68□□□□□ -0.54
PDGFC-206ENST00000510982 FKBP8Q14318 412 aa11.68□□□□□ -0.54
PDGFC-206ENST00000510982 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
PDGFC-206ENST00000510982 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
PDGFC-206ENST00000510982 FCHSD2O94868 740 aa11.67□□□□□ -0.54
PDGFC-206ENST00000510982 CYP19A1P11511 503 aaPredicted RBP11.67□□□□□ -0.54
PDGFC-206ENST00000510982 ZNF831Q5JPB2 1677 aa11.67□□□□□ -0.54
PDGFC-206ENST00000510982 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
PDGFC-206ENST00000510982 PIM2Q9P1W9 311 aa11.66□□□□□ -0.54
PDGFC-206ENST00000510982 PXDNLA1KZ92 1463 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 CICQ96RK0 1608 aaPredicted RBP11.65□□□□□ -0.54
PDGFC-206ENST00000510982 SCN11AQ9UI33 1791 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 KCNA3P22001 575 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 TM4SF1P30408 202 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 DDR1Q08345 913 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 TEFQ10587 303 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
PDGFC-206ENST00000510982 COL5A3P25940 1745 aaPredicted RBP11.65□□□□□ -0.54
PDGFC-206ENST00000510982 NPC1L1Q9UHC9 1359 aa11.65□□□□□ -0.55
PDGFC-206ENST00000510982 C10orf71Q711Q0 1435 aa11.64□□□□□ -0.55
PDGFC-206ENST00000510982 STARD3NLO95772 234 aa11.64□□□□□ -0.55
PDGFC-206ENST00000510982 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
PDGFC-206ENST00000510982 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
PDGFC-206ENST00000510982 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
PDGFC-206ENST00000510982 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
PDGFC-206ENST00000510982 ADCY9O60503 1353 aa11.64□□□□□ -0.55
PDGFC-206ENST00000510982 SOS1Q07889 1333 aaPredicted RBP11.63□□□□□ -0.55
PDGFC-206ENST00000510982 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
PDGFC-206ENST00000510982 CHRNA5P30532 468 aa11.63□□□□□ -0.55
PDGFC-206ENST00000510982 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
PDGFC-206ENST00000510982 NUDCQ9Y266 331 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms