RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
LETM1-204ENST00000510940 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
LETM1-204ENST00000510940 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
LETM1-204ENST00000510940 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
LETM1-204ENST00000510940 MRC1P22897 1456 aa17.43■□□□□ 0.38
LETM1-204ENST00000510940 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
LETM1-204ENST00000510940 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
LETM1-204ENST00000510940 ILDR2Q71H61 639 aa17.41■□□□□ 0.38
LETM1-204ENST00000510940 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
LETM1-204ENST00000510940 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
LETM1-204ENST00000510940 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
LETM1-204ENST00000510940 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
LETM1-204ENST00000510940 SOCS7O14512 581 aa17.4■□□□□ 0.38
LETM1-204ENST00000510940 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
LETM1-204ENST00000510940 TTC5Q8N0Z6 440 aa17.4■□□□□ 0.38
LETM1-204ENST00000510940 MARCH10Q8NA82 808 aaPredicted RBP17.4■□□□□ 0.38
LETM1-204ENST00000510940 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.37
LETM1-204ENST00000510940 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
LETM1-204ENST00000510940 BCL9O00512 1426 aa17.38■□□□□ 0.37
LETM1-204ENST00000510940 KRT27Q7Z3Y8 459 aa17.38■□□□□ 0.37
LETM1-204ENST00000510940 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
LETM1-204ENST00000510940 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
LETM1-204ENST00000510940 ITGB4P16144 1822 aa17.36■□□□□ 0.37
LETM1-204ENST00000510940 HOXB7P09629 217 aa17.36■□□□□ 0.37
LETM1-204ENST00000510940 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
LETM1-204ENST00000510940 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
LETM1-204ENST00000510940 TWISTNBQ3B726 338 aaPredicted RBP17.35■□□□□ 0.37
LETM1-204ENST00000510940 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
LETM1-204ENST00000510940 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
LETM1-204ENST00000510940 RGS12O14924 1447 aa17.35■□□□□ 0.37
LETM1-204ENST00000510940 DOT1LQ8TEK3 1739 aa17.34■□□□□ 0.37
LETM1-204ENST00000510940 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
LETM1-204ENST00000510940 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
LETM1-204ENST00000510940 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.37
LETM1-204ENST00000510940 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
LETM1-204ENST00000510940 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.36
LETM1-204ENST00000510940 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
LETM1-204ENST00000510940 SMARCC1Q92922 1105 aaPredicted RBP17.33■□□□□ 0.36
LETM1-204ENST00000510940 CACNA1FO60840 1977 aa17.32■□□□□ 0.36
LETM1-204ENST00000510940 SF3B2Q13435 895 aaKnown RBP17.32■□□□□ 0.36
LETM1-204ENST00000510940 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
LETM1-204ENST00000510940 PIGBQ92521 554 aa17.32■□□□□ 0.36
LETM1-204ENST00000510940 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
LETM1-204ENST00000510940 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
LETM1-204ENST00000510940 VAMP4O75379 141 aa17.3■□□□□ 0.36
LETM1-204ENST00000510940 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
LETM1-204ENST00000510940 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
LETM1-204ENST00000510940 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
LETM1-204ENST00000510940 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
LETM1-204ENST00000510940 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
LETM1-204ENST00000510940 SLC39A6Q13433 755 aa17.29■□□□□ 0.36
LETM1-204ENST00000510940 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
LETM1-204ENST00000510940 ACSBG1Q96GR2 724 aa17.29■□□□□ 0.36
LETM1-204ENST00000510940 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
LETM1-204ENST00000510940 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
LETM1-204ENST00000510940 RARSP54136 660 aaKnown RBP17.28■□□□□ 0.36
LETM1-204ENST00000510940 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
LETM1-204ENST00000510940 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
LETM1-204ENST00000510940 SBF2Q86WG5 1849 aa17.27■□□□□ 0.36
LETM1-204ENST00000510940 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
LETM1-204ENST00000510940 GIGYF1O75420 1035 aaPredicted RBP17.27■□□□□ 0.36
LETM1-204ENST00000510940 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
LETM1-204ENST00000510940 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
LETM1-204ENST00000510940 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
LETM1-204ENST00000510940 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
LETM1-204ENST00000510940 IPO8O15397 1037 aaKnown RBP17.26■□□□□ 0.35
LETM1-204ENST00000510940 KCNQ3O43525 872 aa17.26■□□□□ 0.35
LETM1-204ENST00000510940 MS4A1P11836 297 aa17.26■□□□□ 0.35
LETM1-204ENST00000510940 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
LETM1-204ENST00000510940 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
LETM1-204ENST00000510940 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
LETM1-204ENST00000510940 ATG3Q9NT62 314 aa17.26■□□□□ 0.35
LETM1-204ENST00000510940 NEFLP07196 543 aa17.25■□□□□ 0.35
LETM1-204ENST00000510940 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
LETM1-204ENST00000510940 STARD3NLO95772 234 aa17.24■□□□□ 0.35
LETM1-204ENST00000510940 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
LETM1-204ENST00000510940 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
LETM1-204ENST00000510940 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
LETM1-204ENST00000510940 KCPQ6ZWJ8 1503 aa17.23■□□□□ 0.35
LETM1-204ENST00000510940 PTCD1O75127 700 aaKnown RBP17.23■□□□□ 0.35
LETM1-204ENST00000510940 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
LETM1-204ENST00000510940 UPF1Q92900 1129 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■□□□□ 9.2
LETM1-204ENST00000510940 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
LETM1-204ENST00000510940 BTAF1O14981 1849 aa17.22■□□□□ 0.35
LETM1-204ENST00000510940 KCNQ2O43526 872 aa17.22■□□□□ 0.35
LETM1-204ENST00000510940 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
LETM1-204ENST00000510940 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
LETM1-204ENST00000510940 DBF4Q9UBU7 674 aaPredicted RBP17.22■□□□□ 0.35
LETM1-204ENST00000510940 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
LETM1-204ENST00000510940 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
LETM1-204ENST00000510940 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
LETM1-204ENST00000510940 FAM182BQ5T319 152 aa17.21■□□□□ 0.35
LETM1-204ENST00000510940 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
LETM1-204ENST00000510940 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.34
LETM1-204ENST00000510940 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
LETM1-204ENST00000510940 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
LETM1-204ENST00000510940 BAG6P46379 1132 aa17.2■□□□□ 0.34
LETM1-204ENST00000510940 SIK1P57059 783 aa17.2■□□□□ 0.34
LETM1-204ENST00000510940 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
LETM1-204ENST00000510940 PTPRCP08575 1304 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms