RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 FLAD1Q8NFF5 587 aa29.77■■■□□ 2.36
SPOCK1-209ENST00000510689 VIRMAQ69YN4 1812 aaKnown RBP29.77■■■□□ 2.36
SPOCK1-209ENST00000510689 CHD4Q14839 1912 aa29.77■■■□□ 2.36
SPOCK1-209ENST00000510689 SLC4A9Q96Q91 983 aa29.76■■■□□ 2.35
SPOCK1-209ENST00000510689 GOLGB1Q14789 3259 aaKnown RBP29.76■■■□□ 2.35
SPOCK1-209ENST00000510689 DCAF8L1A6NGE4 600 aa29.75■■■□□ 2.35
SPOCK1-209ENST00000510689 COL5A3P25940 1745 aaPredicted RBP29.75■■■□□ 2.35
SPOCK1-209ENST00000510689 COL3A1P02461 1466 aaPredicted RBP29.74■■■□□ 2.35
SPOCK1-209ENST00000510689 SMIM5Q71RC9 77 aa29.74■■■□□ 2.35
SPOCK1-209ENST00000510689 MYH14Q7Z406 1995 aaKnown RBP29.73■■■□□ 2.35
SPOCK1-209ENST00000510689 YY1P25490 414 aa29.73■■■□□ 2.35
SPOCK1-209ENST00000510689 AK7Q96M32 723 aa29.72■■■□□ 2.35
SPOCK1-209ENST00000510689 MSH5O43196 834 aa29.71■■■□□ 2.35
SPOCK1-209ENST00000510689 ATP6V1AP38606 617 aa29.71■■■□□ 2.35
SPOCK1-209ENST00000510689 MSL1Q68DK7 614 aa29.7■■■□□ 2.35
SPOCK1-209ENST00000510689 ADAMTS7Q9UKP4 1686 aa29.69■■■□□ 2.34
SPOCK1-209ENST00000510689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.69■■■□□ 2.34
SPOCK1-209ENST00000510689 SSFA2P28290 1259 aa29.69■■■□□ 2.34
SPOCK1-209ENST00000510689 CABP4P57796 275 aa29.68■■■□□ 2.34
SPOCK1-209ENST00000510689 C1orf141Q5JVX7 400 aa29.68■■■□□ 2.34
SPOCK1-209ENST00000510689 NLGN2Q8NFZ4 835 aa29.68■■■□□ 2.34
SPOCK1-209ENST00000510689 CICQ96RK0 1608 aaPredicted RBP29.67■■■□□ 2.34
SPOCK1-209ENST00000510689 DIAPH1O60610 1272 aaKnown RBP29.66■■■□□ 2.34
SPOCK1-209ENST00000510689 HMOX1P09601 288 aa29.66■■■□□ 2.34
SPOCK1-209ENST00000510689 NFATC2IPQ8NCF5 419 aa29.66■■■□□ 2.34
SPOCK1-209ENST00000510689 AKAP4Q5JQC9 854 aa29.65■■■□□ 2.34
SPOCK1-209ENST00000510689 PHF14O94880 888 aa29.64■■■□□ 2.34
SPOCK1-209ENST00000510689 MRC1P22897 1456 aa29.63■■■□□ 2.33
SPOCK1-209ENST00000510689 RC3H1Q5TC82 1133 aaKnown RBP29.63■■■□□ 2.33
SPOCK1-209ENST00000510689 TJP1Q07157 1748 aa29.62■■■□□ 2.33
SPOCK1-209ENST00000510689 GNPATO15228 680 aa29.62■■■□□ 2.33
SPOCK1-209ENST00000510689 RBM42Q9BTD8 480 aaKnown RBP29.62■■■□□ 2.33
SPOCK1-209ENST00000510689 LGR6Q9HBX8 967 aa29.62■■■□□ 2.33
SPOCK1-209ENST00000510689 KLHL34Q8N239 644 aa29.61■■■□□ 2.33
SPOCK1-209ENST00000510689 MTHFSDQ2M296 383 aaKnown RBP29.6■■■□□ 2.33
SPOCK1-209ENST00000510689 CNTNAP4Q9C0A0 1308 aa29.6■■■□□ 2.33
SPOCK1-209ENST00000510689 SLC52A2Q9HAB3 445 aa29.58■■■□□ 2.33
SPOCK1-209ENST00000510689 CD2APQ9Y5K6 639 aa29.58■■■□□ 2.33
SPOCK1-209ENST00000510689 C4AP0C0L4 1744 aa29.57■■■□□ 2.32
SPOCK1-209ENST00000510689 RNMTO43148 476 aaKnown RBP29.57■■■□□ 2.32
SPOCK1-209ENST00000510689 PTCD1O75127 700 aaKnown RBP29.55■■■□□ 2.32
SPOCK1-209ENST00000510689 RPS6KA4O75676 772 aa29.55■■■□□ 2.32
SPOCK1-209ENST00000510689 CNGB1Q14028 1251 aaPredicted RBP29.55■■■□□ 2.32
SPOCK1-209ENST00000510689 GPR162Q16538 588 aa29.55■■■□□ 2.32
SPOCK1-209ENST00000510689 RTCBQ9Y3I0 505 aaKnown RBP29.54■■■□□ 2.32
SPOCK1-209ENST00000510689 KIF13BQ9NQT8 1826 aa29.54■■■□□ 2.32
SPOCK1-209ENST00000510689 YBX3P16989 372 aaKnown RBP eCLIP29.53■■■□□ 2.32
SPOCK1-209ENST00000510689 UBR2Q8IWV8 1755 aa29.52■■■□□ 2.32
SPOCK1-209ENST00000510689 ADRA2BP18089 450 aa29.52■■■□□ 2.32
SPOCK1-209ENST00000510689 TRAPPC3LQ5T215 181 aa29.52■■■□□ 2.32
SPOCK1-209ENST00000510689 ARHGEF1Q92888 912 aaKnown RBP29.52■■■□□ 2.32
SPOCK1-209ENST00000510689 SIPA1L3O60292 1781 aaPredicted RBP29.52■■■□□ 2.32
SPOCK1-209ENST00000510689 KCPQ6ZWJ8 1503 aa29.51■■■□□ 2.32
SPOCK1-209ENST00000510689 KIAA1551Q9HCM1 1747 aa29.49■■■□□ 2.31
SPOCK1-209ENST00000510689 PPP2R1AP30153 589 aa29.49■■■□□ 2.31
SPOCK1-209ENST00000510689 CRKLP46109 303 aaKnown RBP29.49■■■□□ 2.31
SPOCK1-209ENST00000510689 U2SURPO15042 1029 aaKnown RBP29.48■■■□□ 2.31
SPOCK1-209ENST00000510689 ZNF784Q8NCA9 323 aaPredicted RBP29.48■■■□□ 2.31
SPOCK1-209ENST00000510689 GYS1P13807 737 aa29.47■■■□□ 2.31
SPOCK1-209ENST00000510689 SLC39A6Q13433 755 aa29.47■■■□□ 2.31
SPOCK1-209ENST00000510689 INTS5Q6P9B9 1019 aaKnown RBP29.47■■■□□ 2.31
SPOCK1-209ENST00000510689 MMP10P09238 476 aa29.45■■■□□ 2.31
SPOCK1-209ENST00000510689 NLGN1Q8N2Q7 840 aa29.45■■■□□ 2.31
SPOCK1-209ENST00000510689 IL17REQ8NFR9 667 aa29.45■■■□□ 2.31
SPOCK1-209ENST00000510689 DNAJC10Q8IXB1 793 aa29.44■■■□□ 2.3
SPOCK1-209ENST00000510689 PELP1Q8IZL8 1130 aaKnown RBP29.44■■■□□ 2.3
SPOCK1-209ENST00000510689 PHACTR3Q96KR7 559 aa29.44■■■□□ 2.3
SPOCK1-209ENST00000510689 RSPH6AQ9H0K4 717 aa29.44■■■□□ 2.3
SPOCK1-209ENST00000510689 GRIN3BO60391 1043 aa29.41■■■□□ 2.3
SPOCK1-209ENST00000510689 CYP19A1P11511 503 aaPredicted RBP29.41■■■□□ 2.3
SPOCK1-209ENST00000510689 RFC4P35249 363 aa29.41■■■□□ 2.3
SPOCK1-209ENST00000510689 GAS2L2Q8NHY3 880 aa29.41■■■□□ 2.3
SPOCK1-209ENST00000510689 CFAP53Q96M91 514 aa29.41■■■□□ 2.3
SPOCK1-209ENST00000510689 GNAT3A8MTJ3 354 aa29.4■■■□□ 2.3
SPOCK1-209ENST00000510689 CEMIPQ8WUJ3 1361 aa29.39■■■□□ 2.3
SPOCK1-209ENST00000510689 N4BP2Q86UW6 1770 aaPredicted RBP29.39■■■□□ 2.3
SPOCK1-209ENST00000510689 PRKAR2BP31323 418 aa29.39■■■□□ 2.3
SPOCK1-209ENST00000510689 VSIG10Q8N0Z9 540 aa29.39■■■□□ 2.3
SPOCK1-209ENST00000510689 USP42Q9H9J4 1324 aaKnown RBP29.39■■■□□ 2.3
SPOCK1-209ENST00000510689 CCDC87Q9NVE4 849 aa29.38■■■□□ 2.29
SPOCK1-209ENST00000510689 C10orf71Q711Q0 1435 aa29.37■■■□□ 2.29
SPOCK1-209ENST00000510689 SRP68Q9UHB9 627 aaKnown RBP29.37■■■□□ 2.29
SPOCK1-209ENST00000510689 BRCA1P38398 1863 aaKnown RBP29.37■■■□□ 2.29
SPOCK1-209ENST00000510689 PXDNLA1KZ92 1463 aa29.36■■■□□ 2.29
SPOCK1-209ENST00000510689 SOS1Q07889 1333 aaPredicted RBP29.36■■■□□ 2.29
SPOCK1-209ENST00000510689 FKBP8Q14318 412 aa29.34■■■□□ 2.29
SPOCK1-209ENST00000510689 NUDCQ9Y266 331 aa29.34■■■□□ 2.29
SPOCK1-209ENST00000510689 FCHSD2O94868 740 aa29.33■■■□□ 2.29
SPOCK1-209ENST00000510689 ZNF790Q6PG37 636 aa29.32■■■□□ 2.28
SPOCK1-209ENST00000510689 U2AF1L5P0DN76 240 aaPredicted RBP29.31■■■□□ 2.28
SPOCK1-209ENST00000510689 TGFB2P61812 414 aa29.31■■■□□ 2.28
SPOCK1-209ENST00000510689 U2AF1Q01081 240 aaKnown RBP eCLIP29.31■■■□□ 2.28
SPOCK1-209ENST00000510689 DDR1Q08345 913 aa29.31■■■□□ 2.28
SPOCK1-209ENST00000510689 ZNF496Q96IT1 587 aaPredicted RBP29.31■■■□□ 2.28
SPOCK1-209ENST00000510689 ZBTB1Q9Y2K1 713 aa29.31■■■□□ 2.28
SPOCK1-209ENST00000510689 TM4SF1P30408 202 aa29.3■■■□□ 2.28
SPOCK1-209ENST00000510689 TEFQ10587 303 aa29.3■■■□□ 2.28
SPOCK1-209ENST00000510689 AFDNP55196 1824 aaKnown RBP29.29■■■□□ 2.28
SPOCK1-209ENST00000510689 HEG1Q9ULI3 1381 aa29.28■■■□□ 2.28
SPOCK1-209ENST00000510689 DLG5Q8TDM6 1919 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms