RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 COL3A1P02461 1466 aaPredicted RBP31.07■■■□□ 2.56
SNF8-209ENST00000510558 HMOX1P09601 288 aa31.06■■■□□ 2.56
SNF8-209ENST00000510558 FLAD1Q8NFF5 587 aa31.05■■■□□ 2.56
SNF8-209ENST00000510558 MAP3K5Q99683 1374 aa31.05■■■□□ 2.56
SNF8-209ENST00000510558 ZNF831Q5JPB2 1677 aa31.04■■■□□ 2.56
SNF8-209ENST00000510558 CABP4P57796 275 aa31.04■■■□□ 2.56
SNF8-209ENST00000510558 LINC00116Q8NCU8 138 aa31.04■■■□□ 2.56
SNF8-209ENST00000510558 ATP6V1AP38606 617 aa31.03■■■□□ 2.56
SNF8-209ENST00000510558 ITPK1Q13572 414 aa31.03■■■□□ 2.56
SNF8-209ENST00000510558 VIRMAQ69YN4 1812 aaKnown RBP31.03■■■□□ 2.56
SNF8-209ENST00000510558 AKAP4Q5JQC9 854 aa31■■■□□ 2.55
SNF8-209ENST00000510558 AMIGO3Q86WK7 504 aa31■■■□□ 2.55
SNF8-209ENST00000510558 MSL1Q68DK7 614 aa30.99■■■□□ 2.55
SNF8-209ENST00000510558 PHF14O94880 888 aa30.98■■■□□ 2.55
SNF8-209ENST00000510558 RBM42Q9BTD8 480 aaKnown RBP30.98■■■□□ 2.55
SNF8-209ENST00000510558 COL5A3P25940 1745 aaPredicted RBP30.98■■■□□ 2.55
SNF8-209ENST00000510558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.97■■■□□ 2.55
SNF8-209ENST00000510558 SMIM5Q71RC9 77 aa30.97■■■□□ 2.55
SNF8-209ENST00000510558 KLHL34Q8N239 644 aa30.97■■■□□ 2.55
SNF8-209ENST00000510558 SLC4A9Q96Q91 983 aa30.97■■■□□ 2.55
SNF8-209ENST00000510558 SSFA2P28290 1259 aa30.96■■■□□ 2.55
SNF8-209ENST00000510558 NFATC2IPQ8NCF5 419 aa30.96■■■□□ 2.55
SNF8-209ENST00000510558 U2SURPO15042 1029 aaKnown RBP30.95■■■□□ 2.55
SNF8-209ENST00000510558 GNPATO15228 680 aa30.95■■■□□ 2.55
SNF8-209ENST00000510558 MTHFSDQ2M296 383 aaKnown RBP30.93■■■□□ 2.54
SNF8-209ENST00000510558 ADAMTS7Q9UKP4 1686 aa30.93■■■□□ 2.54
SNF8-209ENST00000510558 MRC1P22897 1456 aa30.92■■■□□ 2.54
SNF8-209ENST00000510558 CFAP53Q96M91 514 aa30.91■■■□□ 2.54
SNF8-209ENST00000510558 LGR6Q9HBX8 967 aa30.91■■■□□ 2.54
SNF8-209ENST00000510558 RNMTO43148 476 aaKnown RBP30.9■■■□□ 2.54
SNF8-209ENST00000510558 PTCD1O75127 700 aaKnown RBP30.89■■■□□ 2.54
SNF8-209ENST00000510558 YY1P25490 414 aa30.89■■■□□ 2.54
SNF8-209ENST00000510558 SLC52A2Q9HAB3 445 aa30.89■■■□□ 2.54
SNF8-209ENST00000510558 MYH14Q7Z406 1995 aaKnown RBP30.88■■■□□ 2.53
SNF8-209ENST00000510558 CICQ96RK0 1608 aaPredicted RBP30.88■■■□□ 2.53
SNF8-209ENST00000510558 TJP1Q07157 1748 aa30.88■■■□□ 2.53
SNF8-209ENST00000510558 PPP2R1AP30153 589 aa30.88■■■□□ 2.53
SNF8-209ENST00000510558 RC3H1Q5TC82 1133 aaKnown RBP30.87■■■□□ 2.53
SNF8-209ENST00000510558 CNTNAP4Q9C0A0 1308 aa30.87■■■□□ 2.53
SNF8-209ENST00000510558 NLGN2Q8NFZ4 835 aa30.86■■■□□ 2.53
SNF8-209ENST00000510558 RTCBQ9Y3I0 505 aaKnown RBP30.86■■■□□ 2.53
SNF8-209ENST00000510558 CHD4Q14839 1912 aa30.83■■■□□ 2.53
SNF8-209ENST00000510558 GAS2L2Q8NHY3 880 aa30.82■■■□□ 2.52
SNF8-209ENST00000510558 TRAPPC3LQ5T215 181 aa30.81■■■□□ 2.52
SNF8-209ENST00000510558 NUDCQ9Y266 331 aa30.81■■■□□ 2.52
SNF8-209ENST00000510558 C4AP0C0L4 1744 aa30.81■■■□□ 2.52
SNF8-209ENST00000510558 RPS6KA4O75676 772 aa30.8■■■□□ 2.52
SNF8-209ENST00000510558 GPR162Q16538 588 aa30.8■■■□□ 2.52
SNF8-209ENST00000510558 ADRA2BP18089 450 aa30.79■■■□□ 2.52
SNF8-209ENST00000510558 SLC39A6Q13433 755 aa30.79■■■□□ 2.52
SNF8-209ENST00000510558 RSPH6AQ9H0K4 717 aa30.79■■■□□ 2.52
SNF8-209ENST00000510558 PRKAR2BP31323 418 aa30.78■■■□□ 2.52
SNF8-209ENST00000510558 CRKLP46109 303 aaKnown RBP30.78■■■□□ 2.52
SNF8-209ENST00000510558 CD2APQ9Y5K6 639 aa30.78■■■□□ 2.52
SNF8-209ENST00000510558 KCPQ6ZWJ8 1503 aa30.78■■■□□ 2.52
SNF8-209ENST00000510558 UBR2Q8IWV8 1755 aa30.77■■■□□ 2.52
SNF8-209ENST00000510558 GNAT3A8MTJ3 354 aa30.77■■■□□ 2.52
SNF8-209ENST00000510558 ARHGEF1Q92888 912 aaKnown RBP30.77■■■□□ 2.52
SNF8-209ENST00000510558 PELP1Q8IZL8 1130 aaKnown RBP30.76■■■□□ 2.51
SNF8-209ENST00000510558 SIPA1L3O60292 1781 aaPredicted RBP30.76■■■□□ 2.51
SNF8-209ENST00000510558 U2AF1L5P0DN76 240 aaPredicted RBP30.75■■■□□ 2.51
SNF8-209ENST00000510558 U2AF1Q01081 240 aaKnown RBP eCLIP30.75■■■□□ 2.51
SNF8-209ENST00000510558 PHACTR3Q96KR7 559 aa30.75■■■□□ 2.51
SNF8-209ENST00000510558 DNAJC10Q8IXB1 793 aa30.74■■■□□ 2.51
SNF8-209ENST00000510558 IL17REQ8NFR9 667 aa30.74■■■□□ 2.51
SNF8-209ENST00000510558 RFC4P35249 363 aa30.73■■■□□ 2.51
SNF8-209ENST00000510558 MMP10P09238 476 aa30.71■■■□□ 2.51
SNF8-209ENST00000510558 TEFQ10587 303 aa30.71■■■□□ 2.51
SNF8-209ENST00000510558 UTRNP46939 3433 aa30.7■■■□□ 2.51
SNF8-209ENST00000510558 INTS5Q6P9B9 1019 aaKnown RBP30.7■■■□□ 2.51
SNF8-209ENST00000510558 NLGN1Q8N2Q7 840 aa30.7■■■□□ 2.51
SNF8-209ENST00000510558 FCHSD2O94868 740 aa30.69■■■□□ 2.5
SNF8-209ENST00000510558 GYS1P13807 737 aa30.69■■■□□ 2.5
SNF8-209ENST00000510558 CCDC87Q9NVE4 849 aa30.69■■■□□ 2.5
SNF8-209ENST00000510558 KIF13BQ9NQT8 1826 aa30.68■■■□□ 2.5
SNF8-209ENST00000510558 CEMIPQ8WUJ3 1361 aa30.67■■■□□ 2.5
SNF8-209ENST00000510558 CYP19A1P11511 503 aaPredicted RBP30.67■■■□□ 2.5
SNF8-209ENST00000510558 YBX3P16989 372 aaKnown RBP eCLIP30.67■■■□□ 2.52e-6■■□□□ 12.9
SNF8-209ENST00000510558 TTC5Q8N0Z6 440 aa30.67■■■□□ 2.5
SNF8-209ENST00000510558 VSIG10Q8N0Z9 540 aa30.67■■■□□ 2.5
SNF8-209ENST00000510558 SRP68Q9UHB9 627 aaKnown RBP30.64■■■□□ 2.5
SNF8-209ENST00000510558 USP42Q9H9J4 1324 aaKnown RBP30.64■■■□□ 2.5
SNF8-209ENST00000510558 ZNF790Q6PG37 636 aa30.63■■■□□ 2.49
SNF8-209ENST00000510558 SOS1Q07889 1333 aaPredicted RBP30.63■■■□□ 2.49
SNF8-209ENST00000510558 GRIN3BO60391 1043 aa30.62■■■□□ 2.49
SNF8-209ENST00000510558 ZNF496Q96IT1 587 aaPredicted RBP30.61■■■□□ 2.49
SNF8-209ENST00000510558 ZBTB1Q9Y2K1 713 aa30.61■■■□□ 2.49
SNF8-209ENST00000510558 KIAA1551Q9HCM1 1747 aa30.6■■■□□ 2.49
SNF8-209ENST00000510558 GOLGB1Q14789 3259 aaKnown RBP30.59■■■□□ 2.49
SNF8-209ENST00000510558 C10orf71Q711Q0 1435 aa30.59■■■□□ 2.49
SNF8-209ENST00000510558 HEG1Q9ULI3 1381 aa30.59■■■□□ 2.49
SNF8-209ENST00000510558 DDX10Q13206 875 aaKnown RBP30.59■■■□□ 2.49
SNF8-209ENST00000510558 RTF1Q92541 710 aaKnown RBP30.59■■■□□ 2.49
SNF8-209ENST00000510558 PARP3Q9Y6F1 533 aa30.59■■■□□ 2.49
SNF8-209ENST00000510558 COL15A1P39059 1388 aa30.58■■■□□ 2.49
SNF8-209ENST00000510558 DLG5Q8TDM6 1919 aa30.58■■■□□ 2.49
SNF8-209ENST00000510558 FKBP8Q14318 412 aa30.58■■■□□ 2.49
SNF8-209ENST00000510558 N4BP2Q86UW6 1770 aaPredicted RBP30.58■■■□□ 2.49
SNF8-209ENST00000510558 ZNF784Q8NCA9 323 aaPredicted RBP30.57■■■□□ 2.48
SNF8-209ENST00000510558 BTBD11A6QL63 1104 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms