RNA–Protein interactions for RNA: ENST00000510499.1

TMED9-205, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-205ENST00000510499 SIK1P57059 783 aa13.61□□□□□ -0.23
TMED9-205ENST00000510499 COL13A1Q5TAT6 717 aaPredicted RBP13.61□□□□□ -0.23
TMED9-205ENST00000510499 PIGBQ92521 554 aa13.61□□□□□ -0.23
TMED9-205ENST00000510499 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
TMED9-205ENST00000510499 HTRA3P83110 453 aa13.6□□□□□ -0.23
TMED9-205ENST00000510499 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
TMED9-205ENST00000510499 ARHGAP27Q6ZUM4 889 aa13.6□□□□□ -0.23
TMED9-205ENST00000510499 TGFB2P61812 414 aa13.59□□□□□ -0.23
TMED9-205ENST00000510499 JMYQ8N9B5 988 aa13.59□□□□□ -0.23
TMED9-205ENST00000510499 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
TMED9-205ENST00000510499 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 HSP90AB2PQ58FF8 381 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 TNS4Q8IZW8 715 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 ANKRD26Q9UPS8 1709 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
TMED9-205ENST00000510499 SBF1O95248 1867 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 ZNF831Q5JPB2 1677 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 FCHSD2O94868 740 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 FSTL1Q12841 308 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 ITPK1Q13572 414 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 CCDC87Q9NVE4 849 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
TMED9-205ENST00000510499 NCAPD2Q15021 1401 aa13.56□□□□□ -0.24
TMED9-205ENST00000510499 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
TMED9-205ENST00000510499 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
TMED9-205ENST00000510499 FYB1O15117 783 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 DPEP1P16444 411 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 PRELPP51888 382 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
TMED9-205ENST00000510499 NLGN1Q8N2Q7 840 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 TESK2Q96S53 571 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 ASAP1Q9ULH1 1129 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 KDRP35968 1356 aa13.55□□□□□ -0.24
TMED9-205ENST00000510499 TMF1P82094 1093 aa13.54□□□□□ -0.24
TMED9-205ENST00000510499 RTCBQ9Y3I0 505 aaKnown RBP13.54□□□□□ -0.24
TMED9-205ENST00000510499 MYH14Q7Z406 1995 aaKnown RBP13.53□□□□□ -0.24
TMED9-205ENST00000510499 TRAPPC3LQ5T215 181 aa13.53□□□□□ -0.24
TMED9-205ENST00000510499 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
TMED9-205ENST00000510499 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
TMED9-205ENST00000510499 SLC24A1O60721 1099 aa13.52□□□□□ -0.25
TMED9-205ENST00000510499 RNF181Q9P0P0 153 aa13.52□□□□□ -0.25
TMED9-205ENST00000510499 TIAM2Q8IVF5 1701 aa13.51□□□□□ -0.25
TMED9-205ENST00000510499 TONSLQ96HA7 1378 aa13.51□□□□□ -0.25
TMED9-205ENST00000510499 GYS1P13807 737 aa13.51□□□□□ -0.25
TMED9-205ENST00000510499 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
TMED9-205ENST00000510499 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
TMED9-205ENST00000510499 RFC4P35249 363 aa13.5□□□□□ -0.25
TMED9-205ENST00000510499 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
TMED9-205ENST00000510499 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
TMED9-205ENST00000510499 DCAF5Q96JK2 942 aa13.5□□□□□ -0.25
TMED9-205ENST00000510499 RRAGCQ9HB90 399 aa13.5□□□□□ -0.25
TMED9-205ENST00000510499 ATG3Q9NT62 314 aa13.5□□□□□ -0.25
TMED9-205ENST00000510499 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
TMED9-205ENST00000510499 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
TMED9-205ENST00000510499 CNTNAP4Q9C0A0 1308 aa13.49□□□□□ -0.25
TMED9-205ENST00000510499 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
TMED9-205ENST00000510499 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
TMED9-205ENST00000510499 PHKG2P15735 406 aa13.49□□□□□ -0.25
TMED9-205ENST00000510499 DALRD3Q5D0E6 543 aaKnown RBP13.49□□□□□ -0.25
TMED9-205ENST00000510499 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
TMED9-205ENST00000510499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
TMED9-205ENST00000510499 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
TMED9-205ENST00000510499 KCNA3P22001 575 aa13.48□□□□□ -0.25
TMED9-205ENST00000510499 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
TMED9-205ENST00000510499 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
TMED9-205ENST00000510499 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
TMED9-205ENST00000510499 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
TMED9-205ENST00000510499 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
TMED9-205ENST00000510499 EYA1Q99502 592 aa13.46□□□□□ -0.25
TMED9-205ENST00000510499 TJP1Q07157 1748 aa13.46□□□□□ -0.25
TMED9-205ENST00000510499 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.26
TMED9-205ENST00000510499 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
TMED9-205ENST00000510499 CHRNA5P30532 468 aa13.44□□□□□ -0.26
TMED9-205ENST00000510499 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
TMED9-205ENST00000510499 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
TMED9-205ENST00000510499 USP42Q9H9J4 1324 aaKnown RBP13.43□□□□□ -0.26
TMED9-205ENST00000510499 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
TMED9-205ENST00000510499 RASSF7Q02833 373 aa13.43□□□□□ -0.26
TMED9-205ENST00000510499 DDR1Q08345 913 aa13.43□□□□□ -0.26
TMED9-205ENST00000510499 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
TMED9-205ENST00000510499 SRP68Q9UHB9 627 aaKnown RBP13.43□□□□□ -0.26
TMED9-205ENST00000510499 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
TMED9-205ENST00000510499 FKBP8Q14318 412 aa13.42□□□□□ -0.26
TMED9-205ENST00000510499 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
TMED9-205ENST00000510499 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
TMED9-205ENST00000510499 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
TMED9-205ENST00000510499 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
TMED9-205ENST00000510499 NRXN2Q9P2S2 1712 aa13.41□□□□□ -0.26
TMED9-205ENST00000510499 DICER1Q9UPY3 1922 aaKnown RBP13.41□□□□□ -0.26
TMED9-205ENST00000510499 GLTPD2A6NH11 291 aa13.4□□□□□ -0.26
TMED9-205ENST00000510499 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
TMED9-205ENST00000510499 LMNB1P20700 586 aa13.4□□□□□ -0.26
TMED9-205ENST00000510499 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
TMED9-205ENST00000510499 CABP4P57796 275 aa13.39□□□□□ -0.27
TMED9-205ENST00000510499 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
TMED9-205ENST00000510499 SCN11AQ9UI33 1791 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms