RNA–Protein interactions for RNA: ENST00000510405.5

SPOCK1-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-208ENST00000510405 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
SPOCK1-208ENST00000510405 PPP1R1BQ9UD71 204 aaPredicted RBP22.96■■□□□ 1.27
SPOCK1-208ENST00000510405 C4BP0C0L5 1744 aa22.96■■□□□ 1.27
SPOCK1-208ENST00000510405 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
SPOCK1-208ENST00000510405 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
SPOCK1-208ENST00000510405 PNPLA7Q6ZV29 1317 aa22.94■■□□□ 1.26
SPOCK1-208ENST00000510405 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
SPOCK1-208ENST00000510405 TUBGCP6Q96RT7 1819 aa22.94■■□□□ 1.26
SPOCK1-208ENST00000510405 RNMTO43148 476 aaKnown RBP22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 ZBTB7AO95365 584 aa22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 NEFMP07197 916 aa22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 AK7Q96M32 723 aa22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 PDGFDQ9GZP0 370 aaPredicted RBP22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
SPOCK1-208ENST00000510405 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
SPOCK1-208ENST00000510405 VIRMAQ69YN4 1812 aaKnown RBP22.92■■□□□ 1.26
SPOCK1-208ENST00000510405 MYBBP1AQ9BQG0 1328 aaKnown RBP22.91■■□□□ 1.26
SPOCK1-208ENST00000510405 CICQ96RK0 1608 aaPredicted RBP22.9■■□□□ 1.26
SPOCK1-208ENST00000510405 RBM42Q9BTD8 480 aaKnown RBP22.89■■□□□ 1.25
SPOCK1-208ENST00000510405 COL24A1Q17RW2 1714 aa22.88■■□□□ 1.25
SPOCK1-208ENST00000510405 SSFA2P28290 1259 aa22.88■■□□□ 1.25
SPOCK1-208ENST00000510405 PTGER2P43116 358 aa22.88■■□□□ 1.25
SPOCK1-208ENST00000510405 LGR6Q9HBX8 967 aa22.88■■□□□ 1.25
SPOCK1-208ENST00000510405 ATF5Q9Y2D1 282 aaPredicted RBP22.88■■□□□ 1.25
SPOCK1-208ENST00000510405 POLD1P28340 1107 aa22.87■■□□□ 1.25
SPOCK1-208ENST00000510405 TEFQ10587 303 aa22.87■■□□□ 1.25
SPOCK1-208ENST00000510405 RC3H1Q5TC82 1133 aaKnown RBP22.87■■□□□ 1.25
SPOCK1-208ENST00000510405 UBR3Q6ZT12 1888 aa22.87■■□□□ 1.25
SPOCK1-208ENST00000510405 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
SPOCK1-208ENST00000510405 ITPK1Q13572 414 aa22.86■■□□□ 1.25
SPOCK1-208ENST00000510405 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
SPOCK1-208ENST00000510405 SGIP1Q9BQI5 828 aa22.86■■□□□ 1.25
SPOCK1-208ENST00000510405 COL5A3P25940 1745 aaPredicted RBP22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 CNTNAP4Q9C0A0 1308 aa22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 MSH5O43196 834 aa22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 COL23A1Q86Y22 540 aaPredicted RBP22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 PHACTR3Q96KR7 559 aa22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 CEMIPQ8WUJ3 1361 aa22.85■■□□□ 1.25
SPOCK1-208ENST00000510405 ADRA2BP18089 450 aa22.84■■□□□ 1.25
SPOCK1-208ENST00000510405 GNPATO15228 680 aa22.83■■□□□ 1.25
SPOCK1-208ENST00000510405 PTCD1O75127 700 aaKnown RBP22.83■■□□□ 1.25
SPOCK1-208ENST00000510405 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
SPOCK1-208ENST00000510405 ARXQ96QS3 562 aa22.83■■□□□ 1.25
SPOCK1-208ENST00000510405 TTC5Q8N0Z6 440 aa22.82■■□□□ 1.24
SPOCK1-208ENST00000510405 IL17REQ8NFR9 667 aa22.82■■□□□ 1.24
SPOCK1-208ENST00000510405 RTCBQ9Y3I0 505 aaKnown RBP22.82■■□□□ 1.24
SPOCK1-208ENST00000510405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.81■■□□□ 1.24
SPOCK1-208ENST00000510405 SLC4A9Q96Q91 983 aa22.81■■□□□ 1.24
SPOCK1-208ENST00000510405 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
SPOCK1-208ENST00000510405 SIPA1L3O60292 1781 aaPredicted RBP22.81■■□□□ 1.24
SPOCK1-208ENST00000510405 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
SPOCK1-208ENST00000510405 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
SPOCK1-208ENST00000510405 UBR2Q8IWV8 1755 aa22.8■■□□□ 1.24
SPOCK1-208ENST00000510405 TJP1Q07157 1748 aa22.79■■□□□ 1.24
SPOCK1-208ENST00000510405 KCPQ6ZWJ8 1503 aa22.79■■□□□ 1.24
SPOCK1-208ENST00000510405 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
SPOCK1-208ENST00000510405 RPS6KA4O75676 772 aa22.77■■□□□ 1.24
SPOCK1-208ENST00000510405 PHF14O94880 888 aa22.77■■□□□ 1.24
SPOCK1-208ENST00000510405 TRAPPC3LQ5T215 181 aa22.77■■□□□ 1.24
SPOCK1-208ENST00000510405 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
SPOCK1-208ENST00000510405 ZNF790Q6PG37 636 aa22.76■■□□□ 1.23
SPOCK1-208ENST00000510405 TEX13AQ9BXU3 409 aaPredicted RBP22.76■■□□□ 1.23
SPOCK1-208ENST00000510405 CRKLP46109 303 aaKnown RBP22.75■■□□□ 1.23
SPOCK1-208ENST00000510405 SLC39A6Q13433 755 aa22.75■■□□□ 1.23
SPOCK1-208ENST00000510405 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
SPOCK1-208ENST00000510405 NFE2L2Q16236 605 aa22.74■■□□□ 1.23
SPOCK1-208ENST00000510405 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
SPOCK1-208ENST00000510405 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
SPOCK1-208ENST00000510405 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
SPOCK1-208ENST00000510405 SYT17Q9BSW7 474 aa22.73■■□□□ 1.23
SPOCK1-208ENST00000510405 CCDC87Q9NVE4 849 aa22.73■■□□□ 1.23
SPOCK1-208ENST00000510405 STARD3NLO95772 234 aa22.72■■□□□ 1.23
SPOCK1-208ENST00000510405 RFC4P35249 363 aa22.72■■□□□ 1.23
SPOCK1-208ENST00000510405 AMIGO3Q86WK7 504 aa22.72■■□□□ 1.23
SPOCK1-208ENST00000510405 MYH14Q7Z406 1995 aaKnown RBP22.71■■□□□ 1.23
SPOCK1-208ENST00000510405 CYP19A1P11511 503 aaPredicted RBP22.71■■□□□ 1.23
SPOCK1-208ENST00000510405 DNAJC10Q8IXB1 793 aa22.71■■□□□ 1.23
SPOCK1-208ENST00000510405 NLGN1Q8N2Q7 840 aa22.71■■□□□ 1.23
SPOCK1-208ENST00000510405 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
SPOCK1-208ENST00000510405 HEG1Q9ULI3 1381 aa22.71■■□□□ 1.23
SPOCK1-208ENST00000510405 DLG5Q8TDM6 1919 aa22.7■■□□□ 1.23
SPOCK1-208ENST00000510405 LMOD3Q0VAK6 560 aa22.7■■□□□ 1.22
SPOCK1-208ENST00000510405 MCM10Q7L590 875 aa22.7■■□□□ 1.22
SPOCK1-208ENST00000510405 MSL1Q68DK7 614 aa22.69■■□□□ 1.22
SPOCK1-208ENST00000510405 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
SPOCK1-208ENST00000510405 ARHGEF1Q92888 912 aaKnown RBP22.69■■□□□ 1.22
SPOCK1-208ENST00000510405 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
SPOCK1-208ENST00000510405 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
SPOCK1-208ENST00000510405 TAF7Q15545 349 aaPredicted RBP22.68■■□□□ 1.22
SPOCK1-208ENST00000510405 SOS1Q07889 1333 aaPredicted RBP22.66■■□□□ 1.22
SPOCK1-208ENST00000510405 CD2APQ9Y5K6 639 aa22.66■■□□□ 1.22
SPOCK1-208ENST00000510405 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
SPOCK1-208ENST00000510405 USP42Q9H9J4 1324 aaKnown RBP22.64■■□□□ 1.22
SPOCK1-208ENST00000510405 DCTN1Q14203 1278 aa22.64■■□□□ 1.21
SPOCK1-208ENST00000510405 A0A087WZG4 1122 aa22.63■■□□□ 1.21
SPOCK1-208ENST00000510405 ZPR1O75312 459 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms