RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 LOC102724428A0A0B4J2F2 783 aa27.35■■□□□ 1.97
TRIO-215ENST00000510281 SIK1P57059 783 aa27.35■■□□□ 1.97
TRIO-215ENST00000510281 CC2D1BQ5T0F9 858 aaKnown RBP27.35■■□□□ 1.97
TRIO-215ENST00000510281 PHF14O94880 888 aa27.34■■□□□ 1.97
TRIO-215ENST00000510281 LINC00116Q8NCU8 138 aa27.34■■□□□ 1.97
TRIO-215ENST00000510281 GPBP1L1Q9HC44 474 aaPredicted RBP27.34■■□□□ 1.97
TRIO-215ENST00000510281 IGSF1Q8N6C5 1336 aa27.34■■□□□ 1.97
TRIO-215ENST00000510281 CNGB1Q14028 1251 aaPredicted RBP27.32■■□□□ 1.96
TRIO-215ENST00000510281 SMIM5Q71RC9 77 aa27.32■■□□□ 1.96
TRIO-215ENST00000510281 TMOD3Q9NYL9 352 aa27.31■■□□□ 1.96
TRIO-215ENST00000510281 PLEKHG2Q9H7P9 1386 aa27.3■■□□□ 1.96
TRIO-215ENST00000510281 ITPK1Q13572 414 aa27.29■■□□□ 1.96
TRIO-215ENST00000510281 IFFO2Q5TF58 517 aa27.29■■□□□ 1.96
TRIO-215ENST00000510281 PHKG2P15735 406 aa27.28■■□□□ 1.96
TRIO-215ENST00000510281 IFNL2Q8IZJ0 200 aa27.28■■□□□ 1.96
TRIO-215ENST00000510281 ASAP1Q9ULH1 1129 aa27.28■■□□□ 1.96
TRIO-215ENST00000510281 GNPATO15228 680 aa27.26■■□□□ 1.95
TRIO-215ENST00000510281 HSPA6P17066 643 aa27.25■■□□□ 1.95
TRIO-215ENST00000510281 ATP6V1AP38606 617 aa27.25■■□□□ 1.95
TRIO-215ENST00000510281 ATG3Q9NT62 314 aa27.25■■□□□ 1.95
TRIO-215ENST00000510281 CICQ96RK0 1608 aaPredicted RBP27.25■■□□□ 1.95
TRIO-215ENST00000510281 NPC1L1Q9UHC9 1359 aa27.24■■□□□ 1.95
TRIO-215ENST00000510281 MTHFSP49914 203 aa27.24■■□□□ 1.95
TRIO-215ENST00000510281 AEBP1Q8IUX7 1158 aa27.24■■□□□ 1.95
TRIO-215ENST00000510281 KDRP35968 1356 aa27.23■■□□□ 1.95
TRIO-215ENST00000510281 ZNF526Q8TF50 670 aaPredicted RBP27.23■■□□□ 1.95
TRIO-215ENST00000510281 IL13P35225 146 aa27.22■■□□□ 1.95
TRIO-215ENST00000510281 WWC3Q9ULE0 1092 aa27.22■■□□□ 1.95
TRIO-215ENST00000510281 ZNF316A6NFI3 1004 aaPredicted RBP27.21■■□□□ 1.95
TRIO-215ENST00000510281 MMP10P09238 476 aa27.21■■□□□ 1.95
TRIO-215ENST00000510281 PXDNLA1KZ92 1463 aa27.2■■□□□ 1.95
TRIO-215ENST00000510281 KIF3CO14782 793 aa27.18■■□□□ 1.94
TRIO-215ENST00000510281 ZNF831Q5JPB2 1677 aa27.17■■□□□ 1.94
TRIO-215ENST00000510281 ERVV-2B6SEH9 535 aa27.17■■□□□ 1.94
TRIO-215ENST00000510281 TGFB2P61812 414 aa27.17■■□□□ 1.94
TRIO-215ENST00000510281 SULT6B1Q6IMI4 303 aa27.17■■□□□ 1.94
TRIO-215ENST00000510281 SLC4A9Q96Q91 983 aa27.17■■□□□ 1.94
TRIO-215ENST00000510281 KIF13BQ9NQT8 1826 aa27.16■■□□□ 1.94
TRIO-215ENST00000510281 TRAPPC3LQ5T215 181 aa27.16■■□□□ 1.94
TRIO-215ENST00000510281 RC3H1Q5TC82 1133 aaKnown RBP27.16■■□□□ 1.94
TRIO-215ENST00000510281 NLGN1Q8N2Q7 840 aa27.16■■□□□ 1.94
TRIO-215ENST00000510281 RTCBQ9Y3I0 505 aaKnown RBP27.16■■□□□ 1.94
TRIO-215ENST00000510281 C10orf71Q711Q0 1435 aa27.16■■□□□ 1.94
TRIO-215ENST00000510281 COL3A1P02461 1466 aaPredicted RBP27.15■■□□□ 1.94
TRIO-215ENST00000510281 KIAA1551Q9HCM1 1747 aa27.15■■□□□ 1.94
TRIO-215ENST00000510281 CNTNAP4Q9C0A0 1308 aa27.14■■□□□ 1.93
TRIO-215ENST00000510281 HSP90AB1P08238 724 aaKnown RBP27.13■■□□□ 1.93
TRIO-215ENST00000510281 DCAF5Q96JK2 942 aa27.13■■□□□ 1.93
TRIO-215ENST00000510281 ARHGEF1Q92888 912 aaKnown RBP27.11■■□□□ 1.93
TRIO-215ENST00000510281 PLEKHO1Q53GL0 409 aaPredicted RBP27.1■■□□□ 1.93
TRIO-215ENST00000510281 ZNF530Q6P9A1 599 aaPredicted RBP27.1■■□□□ 1.93
TRIO-215ENST00000510281 KDM6AO15550 1401 aaPredicted RBP27.09■■□□□ 1.93
TRIO-215ENST00000510281 DIAPH1O60610 1272 aaKnown RBP27.09■■□□□ 1.93
TRIO-215ENST00000510281 RPS6KA4O75676 772 aa27.09■■□□□ 1.93
TRIO-215ENST00000510281 HMOX1P09601 288 aa27.09■■□□□ 1.93
TRIO-215ENST00000510281 GYS1P13807 737 aa27.09■■□□□ 1.93
TRIO-215ENST00000510281 COL5A3P25940 1745 aaPredicted RBP27.08■■□□□ 1.93
TRIO-215ENST00000510281 A0A0G2JLW4 131 aa27.08■■□□□ 1.93
TRIO-215ENST00000510281 AMOTQ4VCS5 1084 aa27.08■■□□□ 1.93
TRIO-215ENST00000510281 RBM42Q9BTD8 480 aaKnown RBP27.08■■□□□ 1.93
TRIO-215ENST00000510281 CCDC87Q9NVE4 849 aa27.08■■□□□ 1.93
TRIO-215ENST00000510281 BCS1LQ9Y276 419 aa27.08■■□□□ 1.93
TRIO-215ENST00000510281 C4AP0C0L4 1744 aa27.07■■□□□ 1.92
TRIO-215ENST00000510281 DPEP1P16444 411 aa27.05■■□□□ 1.92
TRIO-215ENST00000510281 RFC4P35249 363 aa27.05■■□□□ 1.92
TRIO-215ENST00000510281 N4BP2Q86UW6 1770 aaPredicted RBP27.04■■□□□ 1.92
TRIO-215ENST00000510281 TOMM70O94826 608 aa27.03■■□□□ 1.92
TRIO-215ENST00000510281 CABP4P57796 275 aa27.03■■□□□ 1.92
TRIO-215ENST00000510281 PARP3Q9Y6F1 533 aa27.03■■□□□ 1.92
TRIO-215ENST00000510281 APLP1P51693 650 aa27.02■■□□□ 1.92
TRIO-215ENST00000510281 ARHGAP27Q6ZUM4 889 aa27.02■■□□□ 1.92
TRIO-215ENST00000510281 FCHSD2O94868 740 aa27.01■■□□□ 1.91
TRIO-215ENST00000510281 KCNA3P22001 575 aa27.01■■□□□ 1.91
TRIO-215ENST00000510281 PPP2R1AP30153 589 aa27.01■■□□□ 1.91
TRIO-215ENST00000510281 C1orf141Q5JVX7 400 aa27.01■■□□□ 1.91
TRIO-215ENST00000510281 U2SURPO15042 1029 aaKnown RBP27■■□□□ 1.91
TRIO-215ENST00000510281 BRCA1P38398 1863 aaKnown RBP27■■□□□ 1.91
TRIO-215ENST00000510281 MYH14Q7Z406 1995 aaKnown RBP26.99■■□□□ 1.91
TRIO-215ENST00000510281 USP42Q9H9J4 1324 aaKnown RBP26.97■■□□□ 1.91
TRIO-215ENST00000510281 CRKLP46109 303 aaKnown RBP26.97■■□□□ 1.91
TRIO-215ENST00000510281 PTCD1O75127 700 aaKnown RBP26.96■■□□□ 1.91
TRIO-215ENST00000510281 MTHFSDQ2M296 383 aaKnown RBP26.96■■□□□ 1.91
TRIO-215ENST00000510281 DNAJC5GQ8N7S2 189 aa26.96■■□□□ 1.91
TRIO-215ENST00000510281 NMRK2Q9NPI5 230 aa26.96■■□□□ 1.91
TRIO-215ENST00000510281 NFATC2IPQ8NCF5 419 aa26.95■■□□□ 1.9
TRIO-215ENST00000510281 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
TRIO-215ENST00000510281 PIM2Q9P1W9 311 aa26.95■■□□□ 1.9
TRIO-215ENST00000510281 DDR1Q08345 913 aa26.94■■□□□ 1.9
TRIO-215ENST00000510281 FKBP8Q14318 412 aa26.94■■□□□ 1.9
TRIO-215ENST00000510281 AKAP4Q5JQC9 854 aa26.94■■□□□ 1.9
TRIO-215ENST00000510281 C9orf131Q5VYM1 1079 aa26.94■■□□□ 1.9
TRIO-215ENST00000510281 SRP68Q9UHB9 627 aaKnown RBP26.94■■□□□ 1.9
TRIO-215ENST00000510281 ARFGEF1Q9Y6D6 1849 aa26.93■■□□□ 1.9
TRIO-215ENST00000510281 DIEXFQ68CQ4 756 aaKnown RBP26.93■■□□□ 1.9
TRIO-215ENST00000510281 DALRD3Q5D0E6 543 aaKnown RBP26.92■■□□□ 1.9
TRIO-215ENST00000510281 RBM46Q8TBY0 533 aaKnown RBP26.92■■□□□ 1.9
TRIO-215ENST00000510281 TJP1Q07157 1748 aa26.92■■□□□ 1.9
TRIO-215ENST00000510281 SCN11AQ9UI33 1791 aa26.92■■□□□ 1.9
TRIO-215ENST00000510281 INTS5Q6P9B9 1019 aaKnown RBP26.91■■□□□ 1.9
TRIO-215ENST00000510281 LGR6Q9HBX8 967 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms