RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 KLHL34Q8N239 644 aa36.19■■■■□ 3.38
SNF8-208ENST00000510195 LINC00116Q8NCU8 138 aa36.19■■■■□ 3.38
SNF8-208ENST00000510195 UBR3Q6ZT12 1888 aa36.19■■■■□ 3.38
SNF8-208ENST00000510195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.16■■■■□ 3.38
SNF8-208ENST00000510195 CABP4P57796 275 aa36.16■■■■□ 3.38
SNF8-208ENST00000510195 ITPK1Q13572 414 aa36.16■■■■□ 3.38
SNF8-208ENST00000510195 ZNF831Q5JPB2 1677 aa36.16■■■■□ 3.38
SNF8-208ENST00000510195 KDM6AO15550 1401 aaPredicted RBP36.16■■■■□ 3.38
SNF8-208ENST00000510195 GOLGB1Q14789 3259 aaKnown RBP36.16■■■■□ 3.38
SNF8-208ENST00000510195 GPR162Q16538 588 aa36.15■■■■□ 3.38
SNF8-208ENST00000510195 MSL1Q68DK7 614 aa36.15■■■■□ 3.38
SNF8-208ENST00000510195 CC2D1BQ5T0F9 858 aaKnown RBP36.13■■■■□ 3.37
SNF8-208ENST00000510195 AMIGO3Q86WK7 504 aa36.13■■■■□ 3.37
SNF8-208ENST00000510195 CHD4Q14839 1912 aa36.12■■■■□ 3.37
SNF8-208ENST00000510195 PHF14O94880 888 aa36.11■■■■□ 3.37
SNF8-208ENST00000510195 CD2APQ9Y5K6 639 aa36.11■■■■□ 3.37
SNF8-208ENST00000510195 GNPATO15228 680 aa36.1■■■■□ 3.37
SNF8-208ENST00000510195 NLGN2Q8NFZ4 835 aa36.1■■■■□ 3.37
SNF8-208ENST00000510195 DIAPH1O60610 1272 aaKnown RBP36.09■■■■□ 3.37
SNF8-208ENST00000510195 AKAP4Q5JQC9 854 aa36.08■■■■□ 3.37
SNF8-208ENST00000510195 RC3H1Q5TC82 1133 aaKnown RBP36.08■■■■□ 3.37
SNF8-208ENST00000510195 RBM42Q9BTD8 480 aaKnown RBP36.08■■■■□ 3.37
SNF8-208ENST00000510195 SLC4A9Q96Q91 983 aa36.07■■■■□ 3.36
SNF8-208ENST00000510195 NFATC2IPQ8NCF5 419 aa36.06■■■■□ 3.36
SNF8-208ENST00000510195 RTCBQ9Y3I0 505 aaKnown RBP36.04■■■■□ 3.36
SNF8-208ENST00000510195 CNTNAP4Q9C0A0 1308 aa36.03■■■■□ 3.36
SNF8-208ENST00000510195 ADRA2BP18089 450 aa36.02■■■■□ 3.36
SNF8-208ENST00000510195 SMIM5Q71RC9 77 aa36.02■■■■□ 3.36
SNF8-208ENST00000510195 SCN11AQ9UI33 1791 aa36.02■■■■□ 3.36
SNF8-208ENST00000510195 GRIN3BO60391 1043 aa36.01■■■■□ 3.36
SNF8-208ENST00000510195 HMOX1P09601 288 aa36.01■■■■□ 3.36
SNF8-208ENST00000510195 TRAPPC3LQ5T215 181 aa36.01■■■■□ 3.36
SNF8-208ENST00000510195 PELP1Q8IZL8 1130 aaKnown RBP36■■■■□ 3.35
SNF8-208ENST00000510195 COL5A3P25940 1745 aaPredicted RBP35.99■■■■□ 3.35
SNF8-208ENST00000510195 ZNF784Q8NCA9 323 aaPredicted RBP35.98■■■■□ 3.35
SNF8-208ENST00000510195 RPS6KA4O75676 772 aa35.97■■■■□ 3.35
SNF8-208ENST00000510195 SLC52A2Q9HAB3 445 aa35.97■■■■□ 3.35
SNF8-208ENST00000510195 PTCD1O75127 700 aaKnown RBP35.96■■■■□ 3.35
SNF8-208ENST00000510195 NLGN1Q8N2Q7 840 aa35.95■■■■□ 3.35
SNF8-208ENST00000510195 COL3A1P02461 1466 aaPredicted RBP35.93■■■■□ 3.34
SNF8-208ENST00000510195 RNMTO43148 476 aaKnown RBP35.93■■■■□ 3.34
SNF8-208ENST00000510195 MTHFSDQ2M296 383 aaKnown RBP35.93■■■■□ 3.34
SNF8-208ENST00000510195 ARHGEF1Q92888 912 aaKnown RBP35.93■■■■□ 3.34
SNF8-208ENST00000510195 YBX3P16989 372 aaKnown RBP eCLIP35.92■■■■□ 3.34
SNF8-208ENST00000510195 LGR6Q9HBX8 967 aa35.92■■■■□ 3.34
SNF8-208ENST00000510195 CICQ96RK0 1608 aaPredicted RBP35.91■■■■□ 3.34
SNF8-208ENST00000510195 MRC1P22897 1456 aa35.91■■■■□ 3.34
SNF8-208ENST00000510195 RFC4P35249 363 aa35.9■■■■□ 3.34
SNF8-208ENST00000510195 MYH14Q7Z406 1995 aaKnown RBP35.89■■■■□ 3.34
SNF8-208ENST00000510195 MMP10P09238 476 aa35.88■■■■□ 3.33
SNF8-208ENST00000510195 CRKLP46109 303 aaKnown RBP35.88■■■■□ 3.33
SNF8-208ENST00000510195 U2SURPO15042 1029 aaKnown RBP35.87■■■■□ 3.33
SNF8-208ENST00000510195 CNGB1Q14028 1251 aaPredicted RBP35.87■■■■□ 3.33
SNF8-208ENST00000510195 ADAMTS7Q9UKP4 1686 aa35.87■■■■□ 3.33
SNF8-208ENST00000510195 CFAP53Q96M91 514 aa35.86■■■■□ 3.33
SNF8-208ENST00000510195 GYS1P13807 737 aa35.84■■■■□ 3.33
SNF8-208ENST00000510195 VIRMAQ69YN4 1812 aaKnown RBP35.83■■■■□ 3.33
SNF8-208ENST00000510195 GAS2L2Q8NHY3 880 aa35.83■■■■□ 3.33
SNF8-208ENST00000510195 TJP1Q07157 1748 aa35.83■■■■□ 3.33
SNF8-208ENST00000510195 VSIG10Q8N0Z9 540 aa35.8■■■■□ 3.32
SNF8-208ENST00000510195 INTS5Q6P9B9 1019 aaKnown RBP35.79■■■■□ 3.32
SNF8-208ENST00000510195 GNAT3A8MTJ3 354 aa35.78■■■■□ 3.32
SNF8-208ENST00000510195 TGFB2P61812 414 aa35.78■■■■□ 3.32
SNF8-208ENST00000510195 NUDCQ9Y266 331 aa35.78■■■■□ 3.32
SNF8-208ENST00000510195 C4AP0C0L4 1744 aa35.77■■■■□ 3.32
SNF8-208ENST00000510195 SLC39A6Q13433 755 aa35.77■■■■□ 3.32
SNF8-208ENST00000510195 DNAJC10Q8IXB1 793 aa35.77■■■■□ 3.32
SNF8-208ENST00000510195 CCDC87Q9NVE4 849 aa35.77■■■■□ 3.32
SNF8-208ENST00000510195 KIF13BQ9NQT8 1826 aa35.77■■■■□ 3.32
SNF8-208ENST00000510195 PARP3Q9Y6F1 533 aa35.76■■■■□ 3.32
SNF8-208ENST00000510195 USP42Q9H9J4 1324 aaKnown RBP35.75■■■■□ 3.31
SNF8-208ENST00000510195 KCPQ6ZWJ8 1503 aa35.74■■■■□ 3.31
SNF8-208ENST00000510195 CYP19A1P11511 503 aaPredicted RBP35.74■■■■□ 3.31
SNF8-208ENST00000510195 PPP2R1AP30153 589 aa35.74■■■■□ 3.31
SNF8-208ENST00000510195 TEFQ10587 303 aa35.72■■■■□ 3.31
SNF8-208ENST00000510195 IL17REQ8NFR9 667 aa35.72■■■■□ 3.31
SNF8-208ENST00000510195 C10orf71Q711Q0 1435 aa35.72■■■■□ 3.31
SNF8-208ENST00000510195 TTC5Q8N0Z6 440 aa35.71■■■■□ 3.31
SNF8-208ENST00000510195 RSPH6AQ9H0K4 717 aa35.71■■■■□ 3.31
SNF8-208ENST00000510195 PXDNLA1KZ92 1463 aa35.69■■■■□ 3.3
SNF8-208ENST00000510195 SOS1Q07889 1333 aaPredicted RBP35.69■■■■□ 3.3
SNF8-208ENST00000510195 UBR2Q8IWV8 1755 aa35.69■■■■□ 3.3
SNF8-208ENST00000510195 ZPR1O75312 459 aa35.68■■■■□ 3.3
SNF8-208ENST00000510195 PRKAR2BP31323 418 aa35.68■■■■□ 3.3
SNF8-208ENST00000510195 SRP68Q9UHB9 627 aaKnown RBP35.68■■■■□ 3.3
SNF8-208ENST00000510195 FKBP8Q14318 412 aa35.67■■■■□ 3.3
SNF8-208ENST00000510195 CEMIPQ8WUJ3 1361 aa35.66■■■■□ 3.3
SNF8-208ENST00000510195 FCHSD2O94868 740 aa35.66■■■■□ 3.3
SNF8-208ENST00000510195 PHACTR3Q96KR7 559 aa35.66■■■■□ 3.3
SNF8-208ENST00000510195 STARD3NLO95772 234 aa35.65■■■■□ 3.3
SNF8-208ENST00000510195 ZNF790Q6PG37 636 aa35.65■■■■□ 3.3
SNF8-208ENST00000510195 TEX13AQ9BXU3 409 aaPredicted RBP35.65■■■■□ 3.3
SNF8-208ENST00000510195 KIAA1551Q9HCM1 1747 aa35.64■■■■□ 3.3
SNF8-208ENST00000510195 U2AF1L5P0DN76 240 aaPredicted RBP35.64■■■■□ 3.3
SNF8-208ENST00000510195 U2AF1Q01081 240 aaKnown RBP eCLIP35.64■■■■□ 3.3
SNF8-208ENST00000510195 NARFQ9UHQ1 456 aa35.63■■■■□ 3.29
SNF8-208ENST00000510195 A0A0G2JLW4 131 aa35.62■■■■□ 3.29
SNF8-208ENST00000510195 TM4SF1P30408 202 aa35.62■■■■□ 3.29
SNF8-208ENST00000510195 ZBTB1Q9Y2K1 713 aa35.62■■■■□ 3.29
SNF8-208ENST00000510195 COL15A1P39059 1388 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms