RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 CABP4P57796 275 aa13.78□□□□□ -0.2
SCARB2-204ENST00000509994 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
SCARB2-204ENST00000509994 SULT6B1Q6IMI4 303 aa13.78□□□□□ -0.2
SCARB2-204ENST00000509994 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
SCARB2-204ENST00000509994 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
SCARB2-204ENST00000509994 GOLGB1Q14789 3259 aaKnown RBP13.77□□□□□ -0.2
SCARB2-204ENST00000509994 UTRNP46939 3433 aa13.77□□□□□ -0.21
SCARB2-204ENST00000509994 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
SCARB2-204ENST00000509994 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
SCARB2-204ENST00000509994 VIRMAQ69YN4 1812 aaKnown RBP13.76□□□□□ -0.21
SCARB2-204ENST00000509994 PLEKHG2Q9H7P9 1386 aa13.76□□□□□ -0.21
SCARB2-204ENST00000509994 ERVV-2B6SEH9 535 aa13.76□□□□□ -0.21
SCARB2-204ENST00000509994 SSFA2P28290 1259 aa13.76□□□□□ -0.21
SCARB2-204ENST00000509994 MTHFSP49914 203 aa13.76□□□□□ -0.21
SCARB2-204ENST00000509994 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
SCARB2-204ENST00000509994 ZNF784Q8NCA9 323 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-204ENST00000509994 ATG3Q9NT62 314 aa13.76□□□□□ -0.21
SCARB2-204ENST00000509994 ITPK1Q13572 414 aa13.75□□□□□ -0.21
SCARB2-204ENST00000509994 WWC3Q9ULE0 1092 aa13.75□□□□□ -0.21
SCARB2-204ENST00000509994 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
SCARB2-204ENST00000509994 AMIGO3Q86WK7 504 aa13.74□□□□□ -0.21
SCARB2-204ENST00000509994 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-204ENST00000509994 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-204ENST00000509994 GRIN3BO60391 1043 aa13.73□□□□□ -0.21
SCARB2-204ENST00000509994 PTCD1O75127 700 aaKnown RBP13.73□□□□□ -0.21
SCARB2-204ENST00000509994 HMOX1P09601 288 aa13.73□□□□□ -0.21
SCARB2-204ENST00000509994 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-204ENST00000509994 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
SCARB2-204ENST00000509994 CD2APQ9Y5K6 639 aa13.72□□□□□ -0.21
SCARB2-204ENST00000509994 YBX3P16989 372 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCARB2-204ENST00000509994 IL13P35225 146 aa13.71□□□□□ -0.21
SCARB2-204ENST00000509994 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
SCARB2-204ENST00000509994 ZNF831Q5JPB2 1677 aa13.71□□□□□ -0.21
SCARB2-204ENST00000509994 KDRP35968 1356 aa13.71□□□□□ -0.22
SCARB2-204ENST00000509994 DIAPH1O60610 1272 aaKnown RBP13.7□□□□□ -0.22
SCARB2-204ENST00000509994 RFC4P35249 363 aa13.7□□□□□ -0.22
SCARB2-204ENST00000509994 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
SCARB2-204ENST00000509994 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
SCARB2-204ENST00000509994 MMP10P09238 476 aa13.69□□□□□ -0.22
SCARB2-204ENST00000509994 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
SCARB2-204ENST00000509994 MYH14Q7Z406 1995 aaKnown RBP13.69□□□□□ -0.22
SCARB2-204ENST00000509994 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-204ENST00000509994 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
SCARB2-204ENST00000509994 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-204ENST00000509994 TJP1Q07157 1748 aa13.67□□□□□ -0.22
SCARB2-204ENST00000509994 CNTNAP4Q9C0A0 1308 aa13.67□□□□□ -0.22
SCARB2-204ENST00000509994 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-204ENST00000509994 SLC4A9Q96Q91 983 aa13.67□□□□□ -0.22
SCARB2-204ENST00000509994 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
SCARB2-204ENST00000509994 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
SCARB2-204ENST00000509994 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
SCARB2-204ENST00000509994 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
SCARB2-204ENST00000509994 PARP3Q9Y6F1 533 aa13.66□□□□□ -0.22
SCARB2-204ENST00000509994 RPS6KA4O75676 772 aa13.65□□□□□ -0.22
SCARB2-204ENST00000509994 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
SCARB2-204ENST00000509994 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
SCARB2-204ENST00000509994 RNMTO43148 476 aaKnown RBP13.64□□□□□ -0.23
SCARB2-204ENST00000509994 ZNF526Q8TF50 670 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-204ENST00000509994 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
SCARB2-204ENST00000509994 LGR6Q9HBX8 967 aa13.64□□□□□ -0.23
SCARB2-204ENST00000509994 CCDC87Q9NVE4 849 aa13.64□□□□□ -0.23
SCARB2-204ENST00000509994 KIF13BQ9NQT8 1826 aa13.64□□□□□ -0.23
SCARB2-204ENST00000509994 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-204ENST00000509994 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
SCARB2-204ENST00000509994 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
SCARB2-204ENST00000509994 ZPR1O75312 459 aa13.62□□□□□ -0.23
SCARB2-204ENST00000509994 GYS1P13807 737 aa13.62□□□□□ -0.23
SCARB2-204ENST00000509994 DNAJC10Q8IXB1 793 aa13.62□□□□□ -0.23
SCARB2-204ENST00000509994 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
SCARB2-204ENST00000509994 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
SCARB2-204ENST00000509994 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
SCARB2-204ENST00000509994 ATP10DQ9P241 1426 aa13.62□□□□□ -0.23
SCARB2-204ENST00000509994 MRC1P22897 1456 aa13.61□□□□□ -0.23
SCARB2-204ENST00000509994 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
SCARB2-204ENST00000509994 C1QTNF8P60827 252 aa13.61□□□□□ -0.23
SCARB2-204ENST00000509994 TEFQ10587 303 aa13.61□□□□□ -0.23
SCARB2-204ENST00000509994 GPBP1L1Q9HC44 474 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-204ENST00000509994 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
SCARB2-204ENST00000509994 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
SCARB2-204ENST00000509994 C10orf71Q711Q0 1435 aa13.6□□□□□ -0.23
SCARB2-204ENST00000509994 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
SCARB2-204ENST00000509994 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-204ENST00000509994 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
SCARB2-204ENST00000509994 UBR2Q8IWV8 1755 aa13.59□□□□□ -0.23
SCARB2-204ENST00000509994 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
SCARB2-204ENST00000509994 TGFB2P61812 414 aa13.59□□□□□ -0.23
SCARB2-204ENST00000509994 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
SCARB2-204ENST00000509994 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-204ENST00000509994 USP42Q9H9J4 1324 aaKnown RBP13.59□□□□□ -0.23
SCARB2-204ENST00000509994 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
SCARB2-204ENST00000509994 FCHSD2O94868 740 aa13.58□□□□□ -0.24
SCARB2-204ENST00000509994 DPEP1P16444 411 aa13.58□□□□□ -0.24
SCARB2-204ENST00000509994 FKBP8Q14318 412 aa13.58□□□□□ -0.24
SCARB2-204ENST00000509994 INTS5Q6P9B9 1019 aaKnown RBP13.58□□□□□ -0.24
SCARB2-204ENST00000509994 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
SCARB2-204ENST00000509994 COL15A1P39059 1388 aa13.58□□□□□ -0.24
SCARB2-204ENST00000509994 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
SCARB2-204ENST00000509994 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
SCARB2-204ENST00000509994 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
SCARB2-204ENST00000509994 ARHGAP27Q6ZUM4 889 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms