RNA–Protein interactions for RNA: ENST00000509564.1

SDHA-211, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-211ENST00000509564 KIAA1551Q9HCM1 1747 aa16.29■□□□□ 0.2
SDHA-211ENST00000509564 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
SDHA-211ENST00000509564 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
SDHA-211ENST00000509564 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
SDHA-211ENST00000509564 AK7Q96M32 723 aa16.29■□□□□ 0.2
SDHA-211ENST00000509564 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
SDHA-211ENST00000509564 POLD1P28340 1107 aa16.28■□□□□ 0.2
SDHA-211ENST00000509564 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
SDHA-211ENST00000509564 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
SDHA-211ENST00000509564 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
SDHA-211ENST00000509564 MSH5O43196 834 aa16.27■□□□□ 0.2
SDHA-211ENST00000509564 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
SDHA-211ENST00000509564 FHDC1Q9C0D6 1143 aaPredicted RBP16.27■□□□□ 0.2
SDHA-211ENST00000509564 BCORQ6W2J9 1755 aa16.27■□□□□ 0.2
SDHA-211ENST00000509564 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
SDHA-211ENST00000509564 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
SDHA-211ENST00000509564 SIK1P57059 783 aa16.26■□□□□ 0.19
SDHA-211ENST00000509564 ARXQ96QS3 562 aa16.26■□□□□ 0.19
SDHA-211ENST00000509564 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
SDHA-211ENST00000509564 HMOX1P09601 288 aa16.25■□□□□ 0.19
SDHA-211ENST00000509564 KLHL34Q8N239 644 aa16.25■□□□□ 0.19
SDHA-211ENST00000509564 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
SDHA-211ENST00000509564 DLEC1Q9Y238 1755 aa16.24■□□□□ 0.19
SDHA-211ENST00000509564 FLAD1Q8NFF5 587 aa16.24■□□□□ 0.19
SDHA-211ENST00000509564 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
SDHA-211ENST00000509564 PHF14O94880 888 aa16.23■□□□□ 0.19
SDHA-211ENST00000509564 CABP4P57796 275 aa16.23■□□□□ 0.19
SDHA-211ENST00000509564 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
SDHA-211ENST00000509564 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
SDHA-211ENST00000509564 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
SDHA-211ENST00000509564 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
SDHA-211ENST00000509564 COL23A1Q86Y22 540 aaPredicted RBP16.22■□□□□ 0.19
SDHA-211ENST00000509564 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
SDHA-211ENST00000509564 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
SDHA-211ENST00000509564 ARFGEF1Q9Y6D6 1849 aa16.22■□□□□ 0.19
SDHA-211ENST00000509564 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
SDHA-211ENST00000509564 GNPATO15228 680 aa16.21■□□□□ 0.19
SDHA-211ENST00000509564 SSFA2P28290 1259 aa16.21■□□□□ 0.19
SDHA-211ENST00000509564 MSL1Q68DK7 614 aa16.21■□□□□ 0.19
SDHA-211ENST00000509564 ITPK1Q13572 414 aa16.2■□□□□ 0.18
SDHA-211ENST00000509564 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
SDHA-211ENST00000509564 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
SDHA-211ENST00000509564 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
SDHA-211ENST00000509564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.19■□□□□ 0.18
SDHA-211ENST00000509564 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
SDHA-211ENST00000509564 NRXN2Q9P2S2 1712 aa16.18■□□□□ 0.18
SDHA-211ENST00000509564 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
SDHA-211ENST00000509564 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
SDHA-211ENST00000509564 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
SDHA-211ENST00000509564 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
SDHA-211ENST00000509564 SLC52A2Q9HAB3 445 aa16.15■□□□□ 0.18
SDHA-211ENST00000509564 YY1P25490 414 aa16.14■□□□□ 0.17
SDHA-211ENST00000509564 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
SDHA-211ENST00000509564 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
SDHA-211ENST00000509564 C10orf71Q711Q0 1435 aa16.13■□□□□ 0.17
SDHA-211ENST00000509564 RNMTO43148 476 aaKnown RBP16.13■□□□□ 0.17
SDHA-211ENST00000509564 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
SDHA-211ENST00000509564 ADRA2BP18089 450 aa16.13■□□□□ 0.17
SDHA-211ENST00000509564 SLC4A9Q96Q91 983 aa16.13■□□□□ 0.17
SDHA-211ENST00000509564 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
SDHA-211ENST00000509564 ARFGEF2Q9Y6D5 1785 aa16.13■□□□□ 0.17
SDHA-211ENST00000509564 COL11A2P13942 1736 aaPredicted RBP16.12■□□□□ 0.17
SDHA-211ENST00000509564 PRKAR2BP31323 418 aa16.12■□□□□ 0.17
SDHA-211ENST00000509564 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
SDHA-211ENST00000509564 SMIM5Q71RC9 77 aa16.11■□□□□ 0.17
SDHA-211ENST00000509564 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
SDHA-211ENST00000509564 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
SDHA-211ENST00000509564 ANKRD31Q8N7Z5 1873 aa16.11■□□□□ 0.17
SDHA-211ENST00000509564 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
SDHA-211ENST00000509564 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
SDHA-211ENST00000509564 TEFQ10587 303 aa16.1■□□□□ 0.17
SDHA-211ENST00000509564 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
SDHA-211ENST00000509564 COL15A1P39059 1388 aa16.1■□□□□ 0.17
SDHA-211ENST00000509564 CEMIPQ8WUJ3 1361 aa16.1■□□□□ 0.17
SDHA-211ENST00000509564 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
SDHA-211ENST00000509564 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
SDHA-211ENST00000509564 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
SDHA-211ENST00000509564 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
SDHA-211ENST00000509564 GPR162Q16538 588 aa16.09■□□□□ 0.17
SDHA-211ENST00000509564 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
SDHA-211ENST00000509564 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
SDHA-211ENST00000509564 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
SDHA-211ENST00000509564 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
SDHA-211ENST00000509564 RPS6KA4O75676 772 aa16.07■□□□□ 0.16
SDHA-211ENST00000509564 RFC4P35249 363 aa16.07■□□□□ 0.16
SDHA-211ENST00000509564 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
SDHA-211ENST00000509564 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
SDHA-211ENST00000509564 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
SDHA-211ENST00000509564 SLC39A6Q13433 755 aa16.06■□□□□ 0.16
SDHA-211ENST00000509564 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
SDHA-211ENST00000509564 SOS1Q07889 1333 aaPredicted RBP16.05■□□□□ 0.16
SDHA-211ENST00000509564 NEFMP07197 916 aa16.05■□□□□ 0.16
SDHA-211ENST00000509564 MMP10P09238 476 aa16.05■□□□□ 0.16
SDHA-211ENST00000509564 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
SDHA-211ENST00000509564 NUP98P52948 1817 aa16.05■□□□□ 0.16
SDHA-211ENST00000509564 CCDC88AQ3V6T2 1871 aa16.04■□□□□ 0.16
SDHA-211ENST00000509564 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
SDHA-211ENST00000509564 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
SDHA-211ENST00000509564 GYS1P13807 737 aa16.03■□□□□ 0.16
SDHA-211ENST00000509564 NLGN1Q8N2Q7 840 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms