RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
LYSMD3-204ENST00000509384 SLIT2O94813 1529 aa16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 DISP2A7MBM2 1401 aa16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 PANK1Q8TE04 598 aa16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
LYSMD3-204ENST00000509384 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
LYSMD3-204ENST00000509384 HSPA1LP34931 641 aa16.12■□□□□ 0.17
LYSMD3-204ENST00000509384 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
LYSMD3-204ENST00000509384 NRAPQ86VF7 1730 aa16.12■□□□□ 0.17
LYSMD3-204ENST00000509384 TRIM27P14373 513 aa16.11■□□□□ 0.17
LYSMD3-204ENST00000509384 DZIP1LQ8IYY4 767 aaKnown RBP16.11■□□□□ 0.17
LYSMD3-204ENST00000509384 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
LYSMD3-204ENST00000509384 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
LYSMD3-204ENST00000509384 MRC1P22897 1456 aa16.11■□□□□ 0.17
LYSMD3-204ENST00000509384 RLBP1P12271 317 aa16.1■□□□□ 0.17
LYSMD3-204ENST00000509384 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
LYSMD3-204ENST00000509384 DDX54Q8TDD1 881 aaKnown RBP16.1■□□□□ 0.17
LYSMD3-204ENST00000509384 C8orf37Q96NL8 207 aa16.1■□□□□ 0.17
LYSMD3-204ENST00000509384 COG6Q9Y2V7 657 aa16.1■□□□□ 0.17
LYSMD3-204ENST00000509384 SPATA31A1Q5TZJ5 1347 aa16.1■□□□□ 0.17
LYSMD3-204ENST00000509384 MYT1Q01538 1121 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 THRAP3Q9Y2W1 955 aaKnown RBP16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 NWD2Q9ULI1 1742 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 KDM3BQ7LBC6 1761 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 KCNQ3O43525 872 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 HOXB7P09629 217 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 CABP4P57796 275 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 NKX1-1Q15270 411 aaPredicted RBP16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 CDCA7Q9BWT1 371 aaPredicted RBP16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 CCDC9Q9Y3X0 531 aaKnown RBP16.09■□□□□ 0.17
LYSMD3-204ENST00000509384 LRP6O75581 1613 aa16.08■□□□□ 0.17
LYSMD3-204ENST00000509384 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.17
LYSMD3-204ENST00000509384 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.17
LYSMD3-204ENST00000509384 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
LYSMD3-204ENST00000509384 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.16
LYSMD3-204ENST00000509384 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
LYSMD3-204ENST00000509384 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
LYSMD3-204ENST00000509384 MVPQ14764 893 aaKnown RBP16.07■□□□□ 0.16
LYSMD3-204ENST00000509384 CHMP4AQ9BY43 222 aa16.07■□□□□ 0.16
LYSMD3-204ENST00000509384 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
LYSMD3-204ENST00000509384 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
LYSMD3-204ENST00000509384 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
LYSMD3-204ENST00000509384 TNS2Q63HR2 1409 aa16.06■□□□□ 0.16
LYSMD3-204ENST00000509384 ZNF790Q6PG37 636 aa16.06■□□□□ 0.16
LYSMD3-204ENST00000509384 SIPA1L3O60292 1781 aaPredicted RBP16.06■□□□□ 0.16
LYSMD3-204ENST00000509384 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
LYSMD3-204ENST00000509384 EXOC5O00471 708 aa16.05■□□□□ 0.16
LYSMD3-204ENST00000509384 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
LYSMD3-204ENST00000509384 MEX3CQ5U5Q3 659 aaKnown RBP16.05■□□□□ 0.16
LYSMD3-204ENST00000509384 PTPRCP08575 1304 aa16.05■□□□□ 0.16
LYSMD3-204ENST00000509384 SLC39A6Q13433 755 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 FNBP4Q8N3X1 1017 aaPredicted RBP16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 AAMPQ13685 434 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 VPS72Q15906 364 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 BARGINQ6ZT62 677 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
LYSMD3-204ENST00000509384 ABCC4O15439 1325 aa16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 GIGYF1O75420 1035 aaPredicted RBP16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
LYSMD3-204ENST00000509384 DDB1Q16531 1140 aa16.02■□□□□ 0.15
LYSMD3-204ENST00000509384 USP21Q9UK80 565 aa16.02■□□□□ 0.15
LYSMD3-204ENST00000509384 FMNL2Q96PY5 1086 aa16.01■□□□□ 0.15
LYSMD3-204ENST00000509384 ZNF496Q96IT1 587 aaPredicted RBP16■□□□□ 0.15
LYSMD3-204ENST00000509384 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
LYSMD3-204ENST00000509384 RGS12O14924 1447 aa16■□□□□ 0.15
LYSMD3-204ENST00000509384 FLIIQ13045 1269 aa15.99■□□□□ 0.15
LYSMD3-204ENST00000509384 G2E3Q7L622 706 aa15.99■□□□□ 0.15
LYSMD3-204ENST00000509384 FAM98CQ17RN3 349 aaKnown RBP15.99■□□□□ 0.15
LYSMD3-204ENST00000509384 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
LYSMD3-204ENST00000509384 AFF2P51816 1311 aa15.98■□□□□ 0.15
LYSMD3-204ENST00000509384 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
LYSMD3-204ENST00000509384 SNRPA1P09661 255 aaKnown RBP15.98■□□□□ 0.15
LYSMD3-204ENST00000509384 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
LYSMD3-204ENST00000509384 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
LYSMD3-204ENST00000509384 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
LYSMD3-204ENST00000509384 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
LYSMD3-204ENST00000509384 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.97■□□□□ 0.15
LYSMD3-204ENST00000509384 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
LYSMD3-204ENST00000509384 CENPQQ7L2Z9 268 aaPredicted RBP15.95■□□□□ 0.14
LYSMD3-204ENST00000509384 PIGBQ92521 554 aa15.95■□□□□ 0.14
LYSMD3-204ENST00000509384 PAPPAQ13219 1627 aa15.95■□□□□ 0.14
LYSMD3-204ENST00000509384 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
LYSMD3-204ENST00000509384 A0A0G2JS52 829 aa15.94■□□□□ 0.14
LYSMD3-204ENST00000509384 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms