RNA–Protein interactions for RNA: ENST00000509198.1

LRPAP1-203, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 2

Gene LRPAP1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-203ENST00000509198 NUDCQ9Y266 331 aa26.58■■□□□ 1.85
LRPAP1-203ENST00000509198 COL23A1Q86Y22 540 aaPredicted RBP26.56■■□□□ 1.84
LRPAP1-203ENST00000509198 NFATC2IPQ8NCF5 419 aa26.56■■□□□ 1.84
LRPAP1-203ENST00000509198 C4BP0C0L5 1744 aa26.56■■□□□ 1.84
LRPAP1-203ENST00000509198 TAF1LQ8IZX4 1826 aa26.55■■□□□ 1.84
LRPAP1-203ENST00000509198 RBM42Q9BTD8 480 aaKnown RBP26.55■■□□□ 1.84
LRPAP1-203ENST00000509198 TUBGCP6Q96RT7 1819 aa26.55■■□□□ 1.84
LRPAP1-203ENST00000509198 MTHFSDQ2M296 383 aaKnown RBP26.54■■□□□ 1.84
LRPAP1-203ENST00000509198 LINC00116Q8NCU8 138 aa26.53■■□□□ 1.84
LRPAP1-203ENST00000509198 FHDC1Q9C0D6 1143 aaPredicted RBP26.53■■□□□ 1.84
LRPAP1-203ENST00000509198 ITPK1Q13572 414 aa26.52■■□□□ 1.84
LRPAP1-203ENST00000509198 SLC52A2Q9HAB3 445 aa26.51■■□□□ 1.83
LRPAP1-203ENST00000509198 PHF14O94880 888 aa26.5■■□□□ 1.83
LRPAP1-203ENST00000509198 SSFA2P28290 1259 aa26.5■■□□□ 1.83
LRPAP1-203ENST00000509198 GAS2L2Q8NHY3 880 aa26.5■■□□□ 1.83
LRPAP1-203ENST00000509198 SYT17Q9BSW7 474 aa26.5■■□□□ 1.83
LRPAP1-203ENST00000509198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.49■■□□□ 1.83
LRPAP1-203ENST00000509198 GNPATO15228 680 aa26.49■■□□□ 1.83
LRPAP1-203ENST00000509198 RNMTO43148 476 aaKnown RBP26.49■■□□□ 1.83
LRPAP1-203ENST00000509198 SCN11AQ9UI33 1791 aa26.48■■□□□ 1.83
LRPAP1-203ENST00000509198 PTCD1O75127 700 aaKnown RBP26.48■■□□□ 1.83
LRPAP1-203ENST00000509198 U2AF1L5P0DN76 240 aaPredicted RBP26.48■■□□□ 1.83
LRPAP1-203ENST00000509198 U2AF1Q01081 240 aaKnown RBP eCLIP26.48■■□□□ 1.83
LRPAP1-203ENST00000509198 LGR6Q9HBX8 967 aa26.48■■□□□ 1.83
LRPAP1-203ENST00000509198 ZNF831Q5JPB2 1677 aa26.47■■□□□ 1.83
LRPAP1-203ENST00000509198 MAP3K5Q99683 1374 aa26.47■■□□□ 1.83
LRPAP1-203ENST00000509198 PRKAR2BP31323 418 aa26.46■■□□□ 1.83
LRPAP1-203ENST00000509198 GNAT3A8MTJ3 354 aa26.45■■□□□ 1.82
LRPAP1-203ENST00000509198 RC3H1Q5TC82 1133 aaKnown RBP26.45■■□□□ 1.82
LRPAP1-203ENST00000509198 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
LRPAP1-203ENST00000509198 SLC4A9Q96Q91 983 aa26.45■■□□□ 1.82
LRPAP1-203ENST00000509198 COL24A1Q17RW2 1714 aa26.45■■□□□ 1.82
LRPAP1-203ENST00000509198 MRC1P22897 1456 aa26.44■■□□□ 1.82
LRPAP1-203ENST00000509198 FCHSD2O94868 740 aa26.44■■□□□ 1.82
LRPAP1-203ENST00000509198 KLHL34Q8N239 644 aa26.44■■□□□ 1.82
LRPAP1-203ENST00000509198 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
LRPAP1-203ENST00000509198 RTCBQ9Y3I0 505 aaKnown RBP26.44■■□□□ 1.82
LRPAP1-203ENST00000509198 UBR3Q6ZT12 1888 aa26.42■■□□□ 1.82
LRPAP1-203ENST00000509198 CNTNAP4Q9C0A0 1308 aa26.42■■□□□ 1.82
LRPAP1-203ENST00000509198 AMIGO3Q86WK7 504 aa26.42■■□□□ 1.82
LRPAP1-203ENST00000509198 ADRA2BP18089 450 aa26.41■■□□□ 1.82
LRPAP1-203ENST00000509198 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
LRPAP1-203ENST00000509198 TEFQ10587 303 aa26.41■■□□□ 1.82
LRPAP1-203ENST00000509198 DDX10Q13206 875 aaKnown RBP26.41■■□□□ 1.82
LRPAP1-203ENST00000509198 TRAPPC3LQ5T215 181 aa26.41■■□□□ 1.82
LRPAP1-203ENST00000509198 RALBP1Q15311 655 aa26.4■■□□□ 1.82
LRPAP1-203ENST00000509198 ADAMTS7Q9UKP4 1686 aa26.39■■□□□ 1.82
LRPAP1-203ENST00000509198 NEFMP07197 916 aa26.39■■□□□ 1.82
LRPAP1-203ENST00000509198 PHACTR3Q96KR7 559 aa26.39■■□□□ 1.82
LRPAP1-203ENST00000509198 SMIM5Q71RC9 77 aa26.38■■□□□ 1.81
LRPAP1-203ENST00000509198 TTC5Q8N0Z6 440 aa26.38■■□□□ 1.81
LRPAP1-203ENST00000509198 RPS6KA4O75676 772 aa26.37■■□□□ 1.81
LRPAP1-203ENST00000509198 COL5A3P25940 1745 aaPredicted RBP26.36■■□□□ 1.81
LRPAP1-203ENST00000509198 CRKLP46109 303 aaKnown RBP26.36■■□□□ 1.81
LRPAP1-203ENST00000509198 SLC39A6Q13433 755 aa26.36■■□□□ 1.81
LRPAP1-203ENST00000509198 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
LRPAP1-203ENST00000509198 RFC4P35249 363 aa26.35■■□□□ 1.81
LRPAP1-203ENST00000509198 RTF1Q92541 710 aaKnown RBP26.35■■□□□ 1.81
LRPAP1-203ENST00000509198 VSIG10Q8N0Z9 540 aa26.34■■□□□ 1.81
LRPAP1-203ENST00000509198 CICQ96RK0 1608 aaPredicted RBP26.34■■□□□ 1.81
LRPAP1-203ENST00000509198 PNNQ9H307 717 aaKnown RBP26.33■■□□□ 1.81
LRPAP1-203ENST00000509198 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
LRPAP1-203ENST00000509198 DNAJC10Q8IXB1 793 aa26.32■■□□□ 1.8
LRPAP1-203ENST00000509198 NLGN1Q8N2Q7 840 aa26.32■■□□□ 1.8
LRPAP1-203ENST00000509198 ARHGEF1Q92888 912 aaKnown RBP26.32■■□□□ 1.8
LRPAP1-203ENST00000509198 CD2APQ9Y5K6 639 aa26.32■■□□□ 1.8
LRPAP1-203ENST00000509198 CEMIPQ8WUJ3 1361 aa26.32■■□□□ 1.8
LRPAP1-203ENST00000509198 GPR162Q16538 588 aa26.3■■□□□ 1.8
LRPAP1-203ENST00000509198 ZNF790Q6PG37 636 aa26.3■■□□□ 1.8
LRPAP1-203ENST00000509198 CCDC87Q9NVE4 849 aa26.3■■□□□ 1.8
LRPAP1-203ENST00000509198 TJP1Q07157 1748 aa26.3■■□□□ 1.8
LRPAP1-203ENST00000509198 KCPQ6ZWJ8 1503 aa26.29■■□□□ 1.8
LRPAP1-203ENST00000509198 HTATSF1O43719 755 aaKnown RBP26.29■■□□□ 1.8
LRPAP1-203ENST00000509198 YY1P25490 414 aa26.28■■□□□ 1.8
LRPAP1-203ENST00000509198 INTS5Q6P9B9 1019 aaKnown RBP26.28■■□□□ 1.8
LRPAP1-203ENST00000509198 NLGN2Q8NFZ4 835 aa26.28■■□□□ 1.8
LRPAP1-203ENST00000509198 STARD3NLO95772 234 aa26.27■■□□□ 1.8
LRPAP1-203ENST00000509198 CYP19A1P11511 503 aaPredicted RBP26.27■■□□□ 1.8
LRPAP1-203ENST00000509198 MYBBP1AQ9BQG0 1328 aaKnown RBP26.27■■□□□ 1.8
LRPAP1-203ENST00000509198 BTBD11A6QL63 1104 aa26.26■■□□□ 1.79
LRPAP1-203ENST00000509198 MMP10P09238 476 aa26.26■■□□□ 1.79
LRPAP1-203ENST00000509198 PELP1Q8IZL8 1130 aaKnown RBP26.26■■□□□ 1.79
LRPAP1-203ENST00000509198 TEX13AQ9BXU3 409 aaPredicted RBP26.26■■□□□ 1.79
LRPAP1-203ENST00000509198 MAPK8IP3Q9UPT6 1336 aa26.25■■□□□ 1.79
LRPAP1-203ENST00000509198 FMNL2Q96PY5 1086 aa26.25■■□□□ 1.79
LRPAP1-203ENST00000509198 GYS1P13807 737 aa26.24■■□□□ 1.79
LRPAP1-203ENST00000509198 MCM10Q7L590 875 aa26.24■■□□□ 1.79
LRPAP1-203ENST00000509198 ZNF496Q96IT1 587 aaPredicted RBP26.24■■□□□ 1.79
LRPAP1-203ENST00000509198 UBR2Q8IWV8 1755 aa26.24■■□□□ 1.79
LRPAP1-203ENST00000509198 MYH14Q7Z406 1995 aaKnown RBP26.24■■□□□ 1.79
LRPAP1-203ENST00000509198 HEG1Q9ULI3 1381 aa26.23■■□□□ 1.79
LRPAP1-203ENST00000509198 ZPR1O75312 459 aa26.23■■□□□ 1.79
LRPAP1-203ENST00000509198 USP42Q9H9J4 1324 aaKnown RBP26.22■■□□□ 1.79
LRPAP1-203ENST00000509198 SIPA1L3O60292 1781 aaPredicted RBP26.22■■□□□ 1.79
LRPAP1-203ENST00000509198 SOS1Q07889 1333 aaPredicted RBP26.21■■□□□ 1.79
LRPAP1-203ENST00000509198 PLEKHF1Q96S99 279 aa26.21■■□□□ 1.79
LRPAP1-203ENST00000509198 PARP3Q9Y6F1 533 aa26.21■■□□□ 1.79
LRPAP1-203ENST00000509198 C4AP0C0L4 1744 aa26.19■■□□□ 1.78
LRPAP1-203ENST00000509198 ZBTB1Q9Y2K1 713 aa26.19■■□□□ 1.78
LRPAP1-203ENST00000509198 GRIN3BO60391 1043 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms