RNA–Protein interactions for RNA: ENST00000509090.1

COL6A4P2-204, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-204ENST00000509090 CCDC82Q8N4S0 544 aa10.35□□□□□ -0.75
COL6A4P2-204ENST00000509090 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL6A4P2-204ENST00000509090 SPATA31C2B4DYI2 1134 aa10.34□□□□□ -0.75
COL6A4P2-204ENST00000509090 CRTC2Q53ET0 693 aaPredicted RBP10.34□□□□□ -0.75
COL6A4P2-204ENST00000509090 TPCN2Q8NHX9 752 aa10.34□□□□□ -0.75
COL6A4P2-204ENST00000509090 ZNF358Q9NW07 568 aa10.34□□□□□ -0.75
COL6A4P2-204ENST00000509090 SMTNP53814 917 aa10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 PTSQ03393 145 aa10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 PTK7Q13308 1070 aa10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 ZNF775Q96BV0 537 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 ZSCAN10Q96SZ4 725 aaPredicted RBP10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 SERTAD1Q9UHV2 236 aa10.33□□□□□ -0.76
COL6A4P2-204ENST00000509090 SLC35F4A4IF30 521 aa10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 FAM196BA6NMK8 535 aa10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 SUPT5HO00267 1087 aaKnown RBP10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 BACH1O14867 736 aa10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 POU4F2Q12837 409 aa10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 MTFR1Q15390 333 aa10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 TLR1Q15399 786 aa10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 PPARGC1BQ86YN6 1023 aaKnown RBP10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
COL6A4P2-204ENST00000509090 SENP3-EIF4A1A0A087X0R7 540 aa10.31□□□□□ -0.76
COL6A4P2-204ENST00000509090 CDCA8Q53HL2 280 aa10.31□□□□□ -0.76
COL6A4P2-204ENST00000509090 WDR44Q5JSH3 913 aa10.31□□□□□ -0.76
COL6A4P2-204ENST00000509090 A6NJY4 79 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L15C9J2P7 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L10C9JJH3 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L13C9JLJ4 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L12C9JPN9 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L11C9JVI0 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L21D6R901 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L18D6R9N7 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L22D6RA61 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L17D6RBQ6 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L19D6RCP7 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L20D6RJB6 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 M0R2N6 131 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 RHOQP17081 205 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 USP17L24Q0WX57 530 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 NBPF10Q6P3W6 841 aaKnown RBP10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 NPAS3Q8IXF0 933 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 NBPF15Q8N660 670 aa10.3□□□□□ -0.76
COL6A4P2-204ENST00000509090 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.29□□□□□ -0.76
COL6A4P2-204ENST00000509090 CDK2AP1O14519 115 aa10.29□□□□□ -0.76
COL6A4P2-204ENST00000509090 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
COL6A4P2-204ENST00000509090 EPHA4P54764 986 aa10.29□□□□□ -0.76
COL6A4P2-204ENST00000509090 TMEM214Q6NUQ4 689 aaKnown RBP10.29□□□□□ -0.76
COL6A4P2-204ENST00000509090 IQSEC3Q9UPP2 1182 aaPredicted RBP10.29□□□□□ -0.76
COL6A4P2-204ENST00000509090 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 PPFIA3O75145 1194 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 TAS1R3Q7RTX0 852 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 CCDC155Q8N6L0 562 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 RHBDD1Q8TEB9 315 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 ARXQ96QS3 562 aa10.28□□□□□ -0.76
COL6A4P2-204ENST00000509090 SEC13P55735 322 aa10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 DPYDQ12882 1025 aa10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 C4orf17Q53FE4 359 aa10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 TNS4Q8IZW8 715 aa10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 ZNF295-AS1Q8N0V1 137 aa10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 SCHIP1Q9P0W5 487 aaPredicted RBP10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 USP3Q9Y6I4 520 aa10.27□□□□□ -0.77
COL6A4P2-204ENST00000509090 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
COL6A4P2-204ENST00000509090 FOXK2Q01167 660 aa10.26□□□□□ -0.77
COL6A4P2-204ENST00000509090 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
COL6A4P2-204ENST00000509090 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
COL6A4P2-204ENST00000509090 PBXIP1Q96AQ6 731 aa10.26□□□□□ -0.77
COL6A4P2-204ENST00000509090 H3BM21 787 aa10.25□□□□□ -0.77
COL6A4P2-204ENST00000509090 ATG7O95352 703 aa10.25□□□□□ -0.77
COL6A4P2-204ENST00000509090 ELOAQ14241 798 aaKnown RBP10.25□□□□□ -0.77
COL6A4P2-204ENST00000509090 DYRK1BQ9Y463 629 aa10.25□□□□□ -0.77
COL6A4P2-204ENST00000509090 PHKA2P46019 1235 aa10.24□□□□□ -0.77
COL6A4P2-204ENST00000509090 VEGFBP49765 207 aa10.24□□□□□ -0.77
COL6A4P2-204ENST00000509090 TSEN2Q8NCE0 465 aaKnown RBP10.24□□□□□ -0.77
COL6A4P2-204ENST00000509090 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
COL6A4P2-204ENST00000509090 TIMMDC1Q9NPL8 285 aa10.23□□□□□ -0.77
COL6A4P2-204ENST00000509090 NOVA2Q9UNW9 492 aaKnown RBP10.23□□□□□ -0.77
COL6A4P2-204ENST00000509090 LCE2AQ5TA79 106 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P2-204ENST00000509090 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
COL6A4P2-204ENST00000509090 SLC9A9Q8IVB4 645 aa10.22□□□□□ -0.77
COL6A4P2-204ENST00000509090 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
COL6A4P2-204ENST00000509090 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
COL6A4P2-204ENST00000509090 ITGA6P23229 1130 aa10.21□□□□□ -0.77
COL6A4P2-204ENST00000509090 SLC16A10Q8TF71 515 aa10.21□□□□□ -0.77
COL6A4P2-204ENST00000509090 PPP1R15AO75807 674 aaPredicted RBP10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 WFS1O76024 890 aa10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 TEAD4Q15561 434 aa10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 NANOS1Q8WY41 292 aaKnown RBP10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 TSPAN10Q9H1Z9 355 aaPredicted RBP10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 CABP1Q9NZU7 370 aa10.2□□□□□ -0.78
COL6A4P2-204ENST00000509090 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
COL6A4P2-204ENST00000509090 F11P03951 625 aa10.19□□□□□ -0.78
COL6A4P2-204ENST00000509090 VSIG8P0DPA2 414 aa10.19□□□□□ -0.78
COL6A4P2-204ENST00000509090 TBCELQ5QJ74 424 aa10.19□□□□□ -0.78
COL6A4P2-204ENST00000509090 ZDHHC1Q8WTX9 485 aa10.19□□□□□ -0.78
COL6A4P2-204ENST00000509090 CUEDC1Q9NWM3 386 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms