RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 C1orf141Q5JVX7 400 aa31.15■■■□□ 2.58
RETREG1-204ENST00000509048 LINC00116Q8NCU8 138 aa31.15■■■□□ 2.58
RETREG1-204ENST00000509048 ITPK1Q13572 414 aa31.14■■■□□ 2.58
RETREG1-204ENST00000509048 AMIGO3Q86WK7 504 aa31.14■■■□□ 2.58
RETREG1-204ENST00000509048 ATP6V1AP38606 617 aa31.12■■■□□ 2.57
RETREG1-204ENST00000509048 ZNF831Q5JPB2 1677 aa31.12■■■□□ 2.57
RETREG1-204ENST00000509048 YY1P25490 414 aa31.11■■■□□ 2.57
RETREG1-204ENST00000509048 DIAPH1O60610 1272 aaKnown RBP31.1■■■□□ 2.57
RETREG1-204ENST00000509048 SSFA2P28290 1259 aa31.1■■■□□ 2.57
RETREG1-204ENST00000509048 CABP4P57796 275 aa31.1■■■□□ 2.57
RETREG1-204ENST00000509048 MSL1Q68DK7 614 aa31.09■■■□□ 2.57
RETREG1-204ENST00000509048 COL3A1P02461 1466 aaPredicted RBP31.08■■■□□ 2.57
RETREG1-204ENST00000509048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.08■■■□□ 2.57
RETREG1-204ENST00000509048 SLC4A9Q96Q91 983 aa31.08■■■□□ 2.57
RETREG1-204ENST00000509048 HMOX1P09601 288 aa31.07■■■□□ 2.56
RETREG1-204ENST00000509048 AKAP4Q5JQC9 854 aa31.07■■■□□ 2.56
RETREG1-204ENST00000509048 PHF14O94880 888 aa31.06■■■□□ 2.56
RETREG1-204ENST00000509048 SMIM5Q71RC9 77 aa31.06■■■□□ 2.56
RETREG1-204ENST00000509048 SCN11AQ9UI33 1791 aa31.05■■■□□ 2.56
RETREG1-204ENST00000509048 KLHL34Q8N239 644 aa31.05■■■□□ 2.56
RETREG1-204ENST00000509048 CNGB1Q14028 1251 aaPredicted RBP31.04■■■□□ 2.56
RETREG1-204ENST00000509048 NFATC2IPQ8NCF5 419 aa31.04■■■□□ 2.56
RETREG1-204ENST00000509048 RBM42Q9BTD8 480 aaKnown RBP31.04■■■□□ 2.56
RETREG1-204ENST00000509048 GNPATO15228 680 aa31.03■■■□□ 2.56
RETREG1-204ENST00000509048 COL5A3P25940 1745 aaPredicted RBP31.02■■■□□ 2.56
RETREG1-204ENST00000509048 NLGN2Q8NFZ4 835 aa31.02■■■□□ 2.56
RETREG1-204ENST00000509048 RC3H1Q5TC82 1133 aaKnown RBP30.99■■■□□ 2.55
RETREG1-204ENST00000509048 MRC1P22897 1456 aa30.99■■■□□ 2.55
RETREG1-204ENST00000509048 CNTNAP4Q9C0A0 1308 aa30.98■■■□□ 2.55
RETREG1-204ENST00000509048 MTHFSDQ2M296 383 aaKnown RBP30.98■■■□□ 2.55
RETREG1-204ENST00000509048 ADAMTS7Q9UKP4 1686 aa30.97■■■□□ 2.55
RETREG1-204ENST00000509048 SLC52A2Q9HAB3 445 aa30.97■■■□□ 2.55
RETREG1-204ENST00000509048 LGR6Q9HBX8 967 aa30.97■■■□□ 2.55
RETREG1-204ENST00000509048 PTCD1O75127 700 aaKnown RBP30.96■■■□□ 2.55
RETREG1-204ENST00000509048 GPR162Q16538 588 aa30.96■■■□□ 2.55
RETREG1-204ENST00000509048 RTCBQ9Y3I0 505 aaKnown RBP30.96■■■□□ 2.55
RETREG1-204ENST00000509048 CICQ96RK0 1608 aaPredicted RBP30.95■■■□□ 2.55
RETREG1-204ENST00000509048 RNMTO43148 476 aaKnown RBP30.95■■■□□ 2.55
RETREG1-204ENST00000509048 CD2APQ9Y5K6 639 aa30.95■■■□□ 2.55
RETREG1-204ENST00000509048 U2SURPO15042 1029 aaKnown RBP30.94■■■□□ 2.54
RETREG1-204ENST00000509048 VIRMAQ69YN4 1812 aaKnown RBP30.93■■■□□ 2.54
RETREG1-204ENST00000509048 CHD4Q14839 1912 aa30.92■■■□□ 2.54
RETREG1-204ENST00000509048 MYH14Q7Z406 1995 aaKnown RBP30.92■■■□□ 2.54
RETREG1-204ENST00000509048 ADRA2BP18089 450 aa30.92■■■□□ 2.54
RETREG1-204ENST00000509048 TRAPPC3LQ5T215 181 aa30.92■■■□□ 2.54
RETREG1-204ENST00000509048 TJP1Q07157 1748 aa30.91■■■□□ 2.54
RETREG1-204ENST00000509048 RPS6KA4O75676 772 aa30.91■■■□□ 2.54
RETREG1-204ENST00000509048 CFAP53Q96M91 514 aa30.9■■■□□ 2.54
RETREG1-204ENST00000509048 ARHGEF1Q92888 912 aaKnown RBP30.89■■■□□ 2.54
RETREG1-204ENST00000509048 PPP2R1AP30153 589 aa30.88■■■□□ 2.53
RETREG1-204ENST00000509048 CRKLP46109 303 aaKnown RBP30.87■■■□□ 2.53
RETREG1-204ENST00000509048 PELP1Q8IZL8 1130 aaKnown RBP30.87■■■□□ 2.53
RETREG1-204ENST00000509048 GAS2L2Q8NHY3 880 aa30.86■■■□□ 2.53
RETREG1-204ENST00000509048 YBX3P16989 372 aaKnown RBP eCLIP30.85■■■□□ 2.53
RETREG1-204ENST00000509048 KCPQ6ZWJ8 1503 aa30.84■■■□□ 2.53
RETREG1-204ENST00000509048 SLC39A6Q13433 755 aa30.84■■■□□ 2.53
RETREG1-204ENST00000509048 NLGN1Q8N2Q7 840 aa30.84■■■□□ 2.53
RETREG1-204ENST00000509048 C4AP0C0L4 1744 aa30.84■■■□□ 2.53
RETREG1-204ENST00000509048 MMP10P09238 476 aa30.83■■■□□ 2.53
RETREG1-204ENST00000509048 RFC4P35249 363 aa30.83■■■□□ 2.53
RETREG1-204ENST00000509048 GYS1P13807 737 aa30.82■■■□□ 2.52
RETREG1-204ENST00000509048 RSPH6AQ9H0K4 717 aa30.82■■■□□ 2.52
RETREG1-204ENST00000509048 GNAT3A8MTJ3 354 aa30.81■■■□□ 2.52
RETREG1-204ENST00000509048 GRIN3BO60391 1043 aa30.81■■■□□ 2.52
RETREG1-204ENST00000509048 INTS5Q6P9B9 1019 aaKnown RBP30.81■■■□□ 2.52
RETREG1-204ENST00000509048 NUDCQ9Y266 331 aa30.81■■■□□ 2.52
RETREG1-204ENST00000509048 DNAJC10Q8IXB1 793 aa30.8■■■□□ 2.52
RETREG1-204ENST00000509048 ZNF784Q8NCA9 323 aaPredicted RBP30.8■■■□□ 2.52
RETREG1-204ENST00000509048 IL17REQ8NFR9 667 aa30.8■■■□□ 2.52
RETREG1-204ENST00000509048 UBR2Q8IWV8 1755 aa30.79■■■□□ 2.52
RETREG1-204ENST00000509048 PRKAR2BP31323 418 aa30.79■■■□□ 2.52
RETREG1-204ENST00000509048 PHACTR3Q96KR7 559 aa30.79■■■□□ 2.52
RETREG1-204ENST00000509048 VSIG10Q8N0Z9 540 aa30.78■■■□□ 2.52
RETREG1-204ENST00000509048 CYP19A1P11511 503 aaPredicted RBP30.77■■■□□ 2.52
RETREG1-204ENST00000509048 CCDC87Q9NVE4 849 aa30.77■■■□□ 2.52
RETREG1-204ENST00000509048 KIF13BQ9NQT8 1826 aa30.76■■■□□ 2.51
RETREG1-204ENST00000509048 SIPA1L3O60292 1781 aaPredicted RBP30.76■■■□□ 2.51
RETREG1-204ENST00000509048 CEMIPQ8WUJ3 1361 aa30.76■■■□□ 2.51
RETREG1-204ENST00000509048 USP42Q9H9J4 1324 aaKnown RBP30.75■■■□□ 2.51
RETREG1-204ENST00000509048 U2AF1L5P0DN76 240 aaPredicted RBP30.75■■■□□ 2.51
RETREG1-204ENST00000509048 U2AF1Q01081 240 aaKnown RBP eCLIP30.75■■■□□ 2.51
RETREG1-204ENST00000509048 TEFQ10587 303 aa30.75■■■□□ 2.51
RETREG1-204ENST00000509048 FCHSD2O94868 740 aa30.73■■■□□ 2.51
RETREG1-204ENST00000509048 SRP68Q9UHB9 627 aaKnown RBP30.73■■■□□ 2.51
RETREG1-204ENST00000509048 C10orf71Q711Q0 1435 aa30.73■■■□□ 2.51
RETREG1-204ENST00000509048 SOS1Q07889 1333 aaPredicted RBP30.73■■■□□ 2.51
RETREG1-204ENST00000509048 TTC5Q8N0Z6 440 aa30.72■■■□□ 2.51
RETREG1-204ENST00000509048 ZNF790Q6PG37 636 aa30.7■■■□□ 2.51
RETREG1-204ENST00000509048 KIAA1551Q9HCM1 1747 aa30.7■■■□□ 2.5
RETREG1-204ENST00000509048 PXDNLA1KZ92 1463 aa30.7■■■□□ 2.5
RETREG1-204ENST00000509048 FKBP8Q14318 412 aa30.69■■■□□ 2.5
RETREG1-204ENST00000509048 PARP3Q9Y6F1 533 aa30.69■■■□□ 2.5
RETREG1-204ENST00000509048 TGFB2P61812 414 aa30.68■■■□□ 2.5
RETREG1-204ENST00000509048 ZNF496Q96IT1 587 aaPredicted RBP30.68■■■□□ 2.5
RETREG1-204ENST00000509048 ZBTB1Q9Y2K1 713 aa30.68■■■□□ 2.5
RETREG1-204ENST00000509048 COL15A1P39059 1388 aa30.66■■■□□ 2.5
RETREG1-204ENST00000509048 HEG1Q9ULI3 1381 aa30.66■■■□□ 2.5
RETREG1-204ENST00000509048 ZPR1O75312 459 aa30.65■■■□□ 2.5
RETREG1-204ENST00000509048 STARD3NLO95772 234 aa30.64■■■□□ 2.5
RETREG1-204ENST00000509048 USPL1Q5W0Q7 1092 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms