RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 APLP1P51693 650 aa8.44□□□□□ -1.06
SSBP2-211ENST00000509013 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
SSBP2-211ENST00000509013 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
SSBP2-211ENST00000509013 PCDH11XQ9BZA7 1347 aa8.44□□□□□ -1.06
SSBP2-211ENST00000509013 PCDH11YQ9BZA8 1340 aa8.44□□□□□ -1.06
SSBP2-211ENST00000509013 LY75O60449 1722 aa8.43□□□□□ -1.06
SSBP2-211ENST00000509013 DOT1LQ8TEK3 1739 aa8.43□□□□□ -1.06
SSBP2-211ENST00000509013 TUBGCP6Q96RT7 1819 aa8.43□□□□□ -1.06
SSBP2-211ENST00000509013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
SSBP2-211ENST00000509013 SMIM5Q71RC9 77 aa8.43□□□□□ -1.06
SSBP2-211ENST00000509013 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
SSBP2-211ENST00000509013 RTL1A6NKG5 1358 aa8.43□□□□□ -1.06
SSBP2-211ENST00000509013 SMG6Q86US8 1419 aaKnown RBP8.43□□□□□ -1.06
SSBP2-211ENST00000509013 SSFA2P28290 1259 aa8.42□□□□□ -1.06
SSBP2-211ENST00000509013 FAM208AQ9UK61 1670 aaKnown RBP8.42□□□□□ -1.06
SSBP2-211ENST00000509013 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 NSD3Q9BZ95 1437 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 CYP27B1O15528 508 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 TOMM70O94826 608 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 HSP90AB2PQ58FF8 381 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 MIER1Q8N108 512 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 PIGBQ92521 554 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 GGNBP2Q9H3C7 697 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
SSBP2-211ENST00000509013 ST20-MTHFSA0A0A6YYL1 179 aa8.4□□□□□ -1.06
SSBP2-211ENST00000509013 FYB1O15117 783 aa8.4□□□□□ -1.06
SSBP2-211ENST00000509013 SLC24A1O60721 1099 aa8.4□□□□□ -1.06
SSBP2-211ENST00000509013 CENPBP07199 599 aaPredicted RBP8.4□□□□□ -1.06
SSBP2-211ENST00000509013 DNAJC5GQ8N7S2 189 aa8.4□□□□□ -1.06
SSBP2-211ENST00000509013 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.06
SSBP2-211ENST00000509013 INSRP06213 1382 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 TONSLQ96HA7 1378 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 LOC102724428A0A0B4J2F2 783 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 GNPATO15228 680 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 MMP10P09238 476 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 SIK1P57059 783 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 TGFB2P61812 414 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 TESK2Q96S53 571 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 BCS1LQ9Y276 419 aa8.39□□□□□ -1.07
SSBP2-211ENST00000509013 FLT4P35916 1363 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 C5P01031 1676 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 ATP6V1AP38606 617 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 CLCN6P51797 869 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 NKX1-1Q15270 411 aaPredicted RBP8.38□□□□□ -1.07
SSBP2-211ENST00000509013 ARHGAP27Q6ZUM4 889 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 TMOD3Q9NYL9 352 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 SPG7Q9UQ90 795 aa8.38□□□□□ -1.07
SSBP2-211ENST00000509013 C4BP0C0L5 1744 aa8.37□□□□□ -1.07
SSBP2-211ENST00000509013 A0A0G2JLW4 131 aa8.37□□□□□ -1.07
SSBP2-211ENST00000509013 ITPK1Q13572 414 aa8.37□□□□□ -1.07
SSBP2-211ENST00000509013 TRAPPC3LQ5T215 181 aa8.37□□□□□ -1.07
SSBP2-211ENST00000509013 C16orf71Q8IYS4 520 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-211ENST00000509013 NMRK2Q9NPI5 230 aa8.37□□□□□ -1.07
SSBP2-211ENST00000509013 ASAP1Q9ULH1 1129 aa8.37□□□□□ -1.07
SSBP2-211ENST00000509013 KIF24Q5T7B8 1368 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 PPM1GO15355 546 aaPredicted RBP8.36□□□□□ -1.07
SSBP2-211ENST00000509013 FCHSD2O94868 740 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 TMF1P82094 1093 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 NLGN1Q8N2Q7 840 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 RBM46Q8TBY0 533 aaKnown RBP8.36□□□□□ -1.07
SSBP2-211ENST00000509013 YTHDC1Q96MU7 727 aaKnown RBP8.36□□□□□ -1.07
SSBP2-211ENST00000509013 DCBLD2Q96PD2 775 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 CCDC87Q9NVE4 849 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SSBP2-211ENST00000509013 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
SSBP2-211ENST00000509013 DPEP1P16444 411 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 HTRA3P83110 453 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
SSBP2-211ENST00000509013 C9orf131Q5VYM1 1079 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 IFNL2Q8IZJ0 200 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 KLRG1Q96E93 195 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 RGPD2P0DJD1 1756 aa8.35□□□□□ -1.07
SSBP2-211ENST00000509013 CICQ96RK0 1608 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-211ENST00000509013 PHKG2P15735 406 aa8.34□□□□□ -1.07
SSBP2-211ENST00000509013 FSTL1Q12841 308 aa8.34□□□□□ -1.07
SSBP2-211ENST00000509013 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
SSBP2-211ENST00000509013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSBP2-211ENST00000509013 TOGARAM1Q9Y4F4 1720 aa8.34□□□□□ -1.07
SSBP2-211ENST00000509013 GYS1P13807 737 aa8.33□□□□□ -1.08
SSBP2-211ENST00000509013 KCNA3P22001 575 aa8.33□□□□□ -1.08
SSBP2-211ENST00000509013 RFC4P35249 363 aa8.33□□□□□ -1.08
SSBP2-211ENST00000509013 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
SSBP2-211ENST00000509013 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
SSBP2-211ENST00000509013 JMYQ8N9B5 988 aa8.33□□□□□ -1.08
SSBP2-211ENST00000509013 ZNF579Q8NAF0 562 aaKnown RBP8.33□□□□□ -1.08
SSBP2-211ENST00000509013 EYA1Q99502 592 aa8.33□□□□□ -1.08
SSBP2-211ENST00000509013 KDM2BQ8NHM5 1336 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 TAF1LQ8IZX4 1826 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 RNF181Q9P0P0 153 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 PIM2Q9P1W9 311 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
SSBP2-211ENST00000509013 WASHC2AQ641Q2 1341 aa8.31□□□□□ -1.08
SSBP2-211ENST00000509013 NCAPD2Q15021 1401 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms