RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 DCAF11Q8TEB1 546 aa12.63□□□□□ -0.39
COL4A3BP-206ENST00000508809 A0A0G2JS52 829 aa12.62□□□□□ -0.39
COL4A3BP-206ENST00000508809 MYT1Q01538 1121 aa12.62□□□□□ -0.39
COL4A3BP-206ENST00000508809 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
COL4A3BP-206ENST00000508809 BHMG1C9JSJ3 638 aaPredicted RBP12.61□□□□□ -0.39
COL4A3BP-206ENST00000508809 LAPTM4BQ86VI4 370 aa12.61□□□□□ -0.39
COL4A3BP-206ENST00000508809 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
COL4A3BP-206ENST00000508809 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
COL4A3BP-206ENST00000508809 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
COL4A3BP-206ENST00000508809 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
COL4A3BP-206ENST00000508809 FCHSD2O94868 740 aa12.6□□□□□ -0.39
COL4A3BP-206ENST00000508809 FAM182BQ5T319 152 aa12.6□□□□□ -0.39
COL4A3BP-206ENST00000508809 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
COL4A3BP-206ENST00000508809 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
COL4A3BP-206ENST00000508809 ATP7BP35670 1465 aa12.59□□□□□ -0.39
COL4A3BP-206ENST00000508809 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
COL4A3BP-206ENST00000508809 ITSN1Q15811 1721 aa12.58□□□□□ -0.4
COL4A3BP-206ENST00000508809 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
COL4A3BP-206ENST00000508809 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
COL4A3BP-206ENST00000508809 KCTD12Q96CX2 325 aaKnown RBP12.58□□□□□ -0.4
COL4A3BP-206ENST00000508809 CAMKK2Q96RR4 588 aa12.58□□□□□ -0.4
COL4A3BP-206ENST00000508809 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 PLEKHG3A1L390 1219 aa12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 PTGDRQ13258 359 aa12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 CHRNA2Q15822 529 aa12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 NBPF8Q3BBV2 869 aa12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
COL4A3BP-206ENST00000508809 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
COL4A3BP-206ENST00000508809 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
COL4A3BP-206ENST00000508809 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
COL4A3BP-206ENST00000508809 ANKK1Q8NFD2 765 aa12.56□□□□□ -0.4
COL4A3BP-206ENST00000508809 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
COL4A3BP-206ENST00000508809 WNT2BQ93097 391 aa12.55□□□□□ -0.4
COL4A3BP-206ENST00000508809 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
COL4A3BP-206ENST00000508809 SEPT9Q9UHD8 586 aaPredicted RBP12.55□□□□□ -0.4
COL4A3BP-206ENST00000508809 ACEP12821 1306 aa12.55□□□□□ -0.4
COL4A3BP-206ENST00000508809 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
COL4A3BP-206ENST00000508809 TRIM37O94972 964 aa12.54□□□□□ -0.4
COL4A3BP-206ENST00000508809 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
COL4A3BP-206ENST00000508809 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
COL4A3BP-206ENST00000508809 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
COL4A3BP-206ENST00000508809 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
COL4A3BP-206ENST00000508809 PARD3Q8TEW0 1356 aa12.54□□□□□ -0.4
COL4A3BP-206ENST00000508809 EVA1CP58658 441 aa12.53□□□□□ -0.4
COL4A3BP-206ENST00000508809 HIC1Q14526 733 aa12.53□□□□□ -0.4
COL4A3BP-206ENST00000508809 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
COL4A3BP-206ENST00000508809 CPDO75976 1380 aa12.53□□□□□ -0.4
COL4A3BP-206ENST00000508809 SSH2Q76I76 1423 aa12.53□□□□□ -0.4
COL4A3BP-206ENST00000508809 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.4
COL4A3BP-206ENST00000508809 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.4
COL4A3BP-206ENST00000508809 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
COL4A3BP-206ENST00000508809 APBA3O96018 575 aa12.52□□□□□ -0.41
COL4A3BP-206ENST00000508809 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
COL4A3BP-206ENST00000508809 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
COL4A3BP-206ENST00000508809 USP19O94966 1318 aa12.52□□□□□ -0.41
COL4A3BP-206ENST00000508809 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 TCP11L2Q8N4U5 519 aa12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 TATDN2Q93075 761 aa12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 ZFRQ96KR1 1074 aaKnown RBP12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
COL4A3BP-206ENST00000508809 GCP02774 474 aa12.5□□□□□ -0.41
COL4A3BP-206ENST00000508809 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
COL4A3BP-206ENST00000508809 NRKQ7Z2Y5 1582 aa12.49□□□□□ -0.41
COL4A3BP-206ENST00000508809 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
COL4A3BP-206ENST00000508809 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
COL4A3BP-206ENST00000508809 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
COL4A3BP-206ENST00000508809 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
COL4A3BP-206ENST00000508809 TTC13Q8NBP0 860 aa12.49□□□□□ -0.41
COL4A3BP-206ENST00000508809 RREB1Q92766 1687 aa12.48□□□□□ -0.41
COL4A3BP-206ENST00000508809 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
COL4A3BP-206ENST00000508809 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
COL4A3BP-206ENST00000508809 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
COL4A3BP-206ENST00000508809 SMAPO00193 183 aa12.47□□□□□ -0.41
COL4A3BP-206ENST00000508809 GNPATO15228 680 aa12.47□□□□□ -0.41
COL4A3BP-206ENST00000508809 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
COL4A3BP-206ENST00000508809 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
COL4A3BP-206ENST00000508809 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
COL4A3BP-206ENST00000508809 PARP4Q9UKK3 1724 aaKnown RBP12.46□□□□□ -0.41
COL4A3BP-206ENST00000508809 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
COL4A3BP-206ENST00000508809 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
COL4A3BP-206ENST00000508809 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
COL4A3BP-206ENST00000508809 UTRNP46939 3433 aa12.46□□□□□ -0.42
COL4A3BP-206ENST00000508809 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
COL4A3BP-206ENST00000508809 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
COL4A3BP-206ENST00000508809 PTPN5P54829 565 aa12.45□□□□□ -0.42
COL4A3BP-206ENST00000508809 SRPK2P78362 688 aaKnown RBP12.45□□□□□ -0.42
COL4A3BP-206ENST00000508809 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.45□□□□□ -0.42
COL4A3BP-206ENST00000508809 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
COL4A3BP-206ENST00000508809 PLSCR1O15162 318 aa12.44□□□□□ -0.42
COL4A3BP-206ENST00000508809 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
COL4A3BP-206ENST00000508809 CRB1P82279 1406 aa12.44□□□□□ -0.42
COL4A3BP-206ENST00000508809 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
COL4A3BP-206ENST00000508809 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
COL4A3BP-206ENST00000508809 SOWAHBA6NEL2 793 aa12.43□□□□□ -0.42
COL4A3BP-206ENST00000508809 COL18A1P39060 1754 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms