RNA–Protein interactions for RNA: ENST00000508744.1

SIL1-211, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-211ENST00000508744 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
SIL1-211ENST00000508744 SMIM5Q71RC9 77 aa10.25□□□□□ -0.77
SIL1-211ENST00000508744 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
SIL1-211ENST00000508744 PLEKHG2Q9H7P9 1386 aa10.25□□□□□ -0.77
SIL1-211ENST00000508744 MTHFSDQ2M296 383 aaKnown RBP10.24□□□□□ -0.77
SIL1-211ENST00000508744 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
SIL1-211ENST00000508744 RTCBQ9Y3I0 505 aaKnown RBP10.24□□□□□ -0.77
SIL1-211ENST00000508744 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
SIL1-211ENST00000508744 SSFA2P28290 1259 aa10.23□□□□□ -0.77
SIL1-211ENST00000508744 DOT1LQ8TEK3 1739 aa10.23□□□□□ -0.77
SIL1-211ENST00000508744 RNMTO43148 476 aaKnown RBP10.22□□□□□ -0.77
SIL1-211ENST00000508744 U2AF1L5P0DN76 240 aaPredicted RBP10.22□□□□□ -0.77
SIL1-211ENST00000508744 PPP2R1AP30153 589 aa10.22□□□□□ -0.77
SIL1-211ENST00000508744 RFC4P35249 363 aa10.22□□□□□ -0.77
SIL1-211ENST00000508744 U2AF1Q01081 240 aaKnown RBP eCLIP10.22□□□□□ -0.77
SIL1-211ENST00000508744 SLC52A2Q9HAB3 445 aa10.22□□□□□ -0.77
SIL1-211ENST00000508744 KDRP35968 1356 aa10.22□□□□□ -0.77
SIL1-211ENST00000508744 TEFQ10587 303 aa10.21□□□□□ -0.77
SIL1-211ENST00000508744 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.77
SIL1-211ENST00000508744 AMIGO3Q86WK7 504 aa10.21□□□□□ -0.77
SIL1-211ENST00000508744 GAS2L2Q8NHY3 880 aa10.21□□□□□ -0.77
SIL1-211ENST00000508744 SLC4A9Q96Q91 983 aa10.21□□□□□ -0.77
SIL1-211ENST00000508744 ANKRD26Q9UPS8 1709 aa10.21□□□□□ -0.78
SIL1-211ENST00000508744 CASZ1Q86V15 1759 aa10.21□□□□□ -0.78
SIL1-211ENST00000508744 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 RPS6KA4O75676 772 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 NEFMP07197 916 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 PAPPAQ13219 1627 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 SLC39A6Q13433 755 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 TTC5Q8N0Z6 440 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 NLGN1Q8N2Q7 840 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 NLGN2Q8NFZ4 835 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
SIL1-211ENST00000508744 SHANK3Q9BYB0 1731 aa10.2□□□□□ -0.78
SIL1-211ENST00000508744 KDM6AO15550 1401 aaPredicted RBP10.19□□□□□ -0.78
SIL1-211ENST00000508744 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
SIL1-211ENST00000508744 CRKLP46109 303 aaKnown RBP10.19□□□□□ -0.78
SIL1-211ENST00000508744 RTF1Q92541 710 aaKnown RBP10.19□□□□□ -0.78
SIL1-211ENST00000508744 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
SIL1-211ENST00000508744 PKD1L3Q7Z443 1732 aa10.19□□□□□ -0.78
SIL1-211ENST00000508744 MAP3K5Q99683 1374 aa10.18□□□□□ -0.78
SIL1-211ENST00000508744 GRIN3BO60391 1043 aa10.18□□□□□ -0.78
SIL1-211ENST00000508744 FCHSD2O94868 740 aa10.18□□□□□ -0.78
SIL1-211ENST00000508744 MMP10P09238 476 aa10.18□□□□□ -0.78
SIL1-211ENST00000508744 ADRA2BP18089 450 aa10.18□□□□□ -0.78
SIL1-211ENST00000508744 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 LY75O60449 1722 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 ZPR1O75312 459 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 DDX10Q13206 875 aaKnown RBP10.17□□□□□ -0.78
SIL1-211ENST00000508744 DNAJC10Q8IXB1 793 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 IL17REQ8NFR9 667 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 PHACTR3Q96KR7 559 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
SIL1-211ENST00000508744 STARD3NLO95772 234 aa10.16□□□□□ -0.78
SIL1-211ENST00000508744 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
SIL1-211ENST00000508744 RSPH6AQ9H0K4 717 aa10.16□□□□□ -0.78
SIL1-211ENST00000508744 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
SIL1-211ENST00000508744 BTBD11A6QL63 1104 aa10.15□□□□□ -0.78
SIL1-211ENST00000508744 CANXP27824 592 aaKnown RBP10.15□□□□□ -0.78
SIL1-211ENST00000508744 INTS5Q6P9B9 1019 aaKnown RBP10.15□□□□□ -0.78
SIL1-211ENST00000508744 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
SIL1-211ENST00000508744 TEX13AQ9BXU3 409 aaPredicted RBP10.15□□□□□ -0.78
SIL1-211ENST00000508744 PNNQ9H307 717 aaKnown RBP10.15□□□□□ -0.78
SIL1-211ENST00000508744 WWC3Q9ULE0 1092 aa10.15□□□□□ -0.78
SIL1-211ENST00000508744 TOGARAM1Q9Y4F4 1720 aa10.15□□□□□ -0.78
SIL1-211ENST00000508744 C4BP0C0L5 1744 aa10.14□□□□□ -0.79
SIL1-211ENST00000508744 CYP19A1P11511 503 aaPredicted RBP10.14□□□□□ -0.79
SIL1-211ENST00000508744 GYS1P13807 737 aa10.14□□□□□ -0.79
SIL1-211ENST00000508744 ZNF790Q6PG37 636 aa10.14□□□□□ -0.79
SIL1-211ENST00000508744 SRP68Q9UHB9 627 aaKnown RBP10.14□□□□□ -0.79
SIL1-211ENST00000508744 ITGB4P16144 1822 aa10.14□□□□□ -0.79
SIL1-211ENST00000508744 YBX3P16989 372 aaKnown RBP eCLIP10.13□□□□□ -0.79
SIL1-211ENST00000508744 RALBP1Q15311 655 aa10.13□□□□□ -0.79
SIL1-211ENST00000508744 MCM10Q7L590 875 aa10.13□□□□□ -0.79
SIL1-211ENST00000508744 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
SIL1-211ENST00000508744 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
SIL1-211ENST00000508744 C5P01031 1676 aa10.12□□□□□ -0.79
SIL1-211ENST00000508744 A0A0G2JLW4 131 aa10.12□□□□□ -0.79
SIL1-211ENST00000508744 TGFB2P61812 414 aa10.12□□□□□ -0.79
SIL1-211ENST00000508744 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
SIL1-211ENST00000508744 FKBP8Q14318 412 aa10.12□□□□□ -0.79
SIL1-211ENST00000508744 USPL1Q5W0Q7 1092 aa10.12□□□□□ -0.79
SIL1-211ENST00000508744 ZNF784Q8NCA9 323 aaPredicted RBP10.12□□□□□ -0.79
SIL1-211ENST00000508744 ZNF496Q96IT1 587 aaPredicted RBP10.12□□□□□ -0.79
SIL1-211ENST00000508744 A0A087WZG4 1122 aa10.11□□□□□ -0.79
SIL1-211ENST00000508744 HTATSF1O43719 755 aaKnown RBP10.11□□□□□ -0.79
SIL1-211ENST00000508744 NARFQ9UHQ1 456 aa10.11□□□□□ -0.79
SIL1-211ENST00000508744 ZBTB1Q9Y2K1 713 aa10.11□□□□□ -0.79
SIL1-211ENST00000508744 COL3A1P02461 1466 aaPredicted RBP10.1□□□□□ -0.79
SIL1-211ENST00000508744 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
SIL1-211ENST00000508744 MAPK8IP3Q9UPT6 1336 aa10.1□□□□□ -0.79
SIL1-211ENST00000508744 KCNQ3O43525 872 aa10.1□□□□□ -0.79
SIL1-211ENST00000508744 TAF7Q15545 349 aaPredicted RBP10.1□□□□□ -0.79
SIL1-211ENST00000508744 BCS1LQ9Y276 419 aa10.1□□□□□ -0.79
SIL1-211ENST00000508744 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
SIL1-211ENST00000508744 SOS1Q07889 1333 aaPredicted RBP10.09□□□□□ -0.79
SIL1-211ENST00000508744 A1BGP04217 495 aa10.09□□□□□ -0.79
SIL1-211ENST00000508744 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
SIL1-211ENST00000508744 DPEP1P16444 411 aa10.09□□□□□ -0.79
SIL1-211ENST00000508744 TM4SF1P30408 202 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms