RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 UBR3Q6ZT12 1888 aa31.47■■■□□ 2.63
CSNK1G3-204ENST00000508708 ITPK1Q13572 414 aa31.47■■■□□ 2.63
CSNK1G3-204ENST00000508708 HMGB2P26583 209 aaKnown RBP31.46■■■□□ 2.63
CSNK1G3-204ENST00000508708 LINC00116Q8NCU8 138 aa31.46■■■□□ 2.63
CSNK1G3-204ENST00000508708 SLC16A10Q8TF71 515 aa31.46■■■□□ 2.63
CSNK1G3-204ENST00000508708 SLC4A9Q96Q91 983 aa31.46■■■□□ 2.63
CSNK1G3-204ENST00000508708 RSPH6AQ9H0K4 717 aa31.46■■■□□ 2.63
CSNK1G3-204ENST00000508708 PPP1R1BQ9UD71 204 aaPredicted RBP31.45■■■□□ 2.63
CSNK1G3-204ENST00000508708 AMIGO3Q86WK7 504 aa31.44■■■□□ 2.62
CSNK1G3-204ENST00000508708 COL23A1Q86Y22 540 aaPredicted RBP31.44■■■□□ 2.62
CSNK1G3-204ENST00000508708 NFATC2IPQ8NCF5 419 aa31.44■■■□□ 2.62
CSNK1G3-204ENST00000508708 LGR6Q9HBX8 967 aa31.44■■■□□ 2.62
CSNK1G3-204ENST00000508708 COL5A3P25940 1745 aaPredicted RBP31.44■■■□□ 2.62
CSNK1G3-204ENST00000508708 RNMTO43148 476 aaKnown RBP31.43■■■□□ 2.62
CSNK1G3-204ENST00000508708 DDX10Q13206 875 aaKnown RBP31.43■■■□□ 2.62
CSNK1G3-204ENST00000508708 CICQ96RK0 1608 aaPredicted RBP31.42■■■□□ 2.62
CSNK1G3-204ENST00000508708 ATP6V1AP38606 617 aa31.42■■■□□ 2.62
CSNK1G3-204ENST00000508708 NUDCQ9Y266 331 aa31.42■■■□□ 2.62
CSNK1G3-204ENST00000508708 SLC52A2Q9HAB3 445 aa31.41■■■□□ 2.62
CSNK1G3-204ENST00000508708 PRKAR2BP31323 418 aa31.4■■■□□ 2.62
CSNK1G3-204ENST00000508708 ZEB1P37275 1124 aaPredicted RBP31.4■■■□□ 2.62
CSNK1G3-204ENST00000508708 AK7Q96M32 723 aa31.4■■■□□ 2.62
CSNK1G3-204ENST00000508708 MAP3K5Q99683 1374 aa31.4■■■□□ 2.62
CSNK1G3-204ENST00000508708 GAS2L2Q8NHY3 880 aa31.39■■■□□ 2.62
CSNK1G3-204ENST00000508708 PHACTR3Q96KR7 559 aa31.38■■■□□ 2.61
CSNK1G3-204ENST00000508708 U2AF1L5P0DN76 240 aaPredicted RBP31.37■■■□□ 2.61
CSNK1G3-204ENST00000508708 U2AF1Q01081 240 aaKnown RBP eCLIP31.37■■■□□ 2.61
CSNK1G3-204ENST00000508708 TJP1Q07157 1748 aa31.37■■■□□ 2.61
CSNK1G3-204ENST00000508708 FLAD1Q8NFF5 587 aa31.36■■■□□ 2.61
CSNK1G3-204ENST00000508708 RBM42Q9BTD8 480 aaKnown RBP31.36■■■□□ 2.61
CSNK1G3-204ENST00000508708 RALBP1Q15311 655 aa31.35■■■□□ 2.61
CSNK1G3-204ENST00000508708 KCPQ6ZWJ8 1503 aa31.34■■■□□ 2.61
CSNK1G3-204ENST00000508708 SIPA1L3O60292 1781 aaPredicted RBP31.33■■■□□ 2.61
CSNK1G3-204ENST00000508708 FCHSD2O94868 740 aa31.33■■■□□ 2.61
CSNK1G3-204ENST00000508708 SSFA2P28290 1259 aa31.33■■■□□ 2.61
CSNK1G3-204ENST00000508708 SMIM5Q71RC9 77 aa31.33■■■□□ 2.61
CSNK1G3-204ENST00000508708 ARXQ96QS3 562 aa31.33■■■□□ 2.61
CSNK1G3-204ENST00000508708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.32■■■□□ 2.6
CSNK1G3-204ENST00000508708 GNAT3A8MTJ3 354 aa31.32■■■□□ 2.6
CSNK1G3-204ENST00000508708 PTCD1O75127 700 aaKnown RBP31.32■■■□□ 2.6
CSNK1G3-204ENST00000508708 MYH14Q7Z406 1995 aaKnown RBP31.32■■■□□ 2.6
CSNK1G3-204ENST00000508708 CEMIPQ8WUJ3 1361 aa31.31■■■□□ 2.6
CSNK1G3-204ENST00000508708 CNTNAP4Q9C0A0 1308 aa31.31■■■□□ 2.6
CSNK1G3-204ENST00000508708 UBR2Q8IWV8 1755 aa31.31■■■□□ 2.6
CSNK1G3-204ENST00000508708 GNPATO15228 680 aa31.31■■■□□ 2.6
CSNK1G3-204ENST00000508708 IL17REQ8NFR9 667 aa31.31■■■□□ 2.6
CSNK1G3-204ENST00000508708 FHDC1Q9C0D6 1143 aaPredicted RBP31.31■■■□□ 2.6
CSNK1G3-204ENST00000508708 MSH5O43196 834 aa31.3■■■□□ 2.6
CSNK1G3-204ENST00000508708 PHF14O94880 888 aa31.3■■■□□ 2.6
CSNK1G3-204ENST00000508708 POLD1P28340 1107 aa31.28■■■□□ 2.6
CSNK1G3-204ENST00000508708 SLC39A6Q13433 755 aa31.28■■■□□ 2.6
CSNK1G3-204ENST00000508708 RC3H1Q5TC82 1133 aaKnown RBP31.28■■■□□ 2.6
CSNK1G3-204ENST00000508708 MSL1Q68DK7 614 aa31.27■■■□□ 2.6
CSNK1G3-204ENST00000508708 SYT17Q9BSW7 474 aa31.27■■■□□ 2.6
CSNK1G3-204ENST00000508708 UTRNP46939 3433 aa31.26■■■□□ 2.6
CSNK1G3-204ENST00000508708 MYBBP1AQ9BQG0 1328 aaKnown RBP31.24■■■□□ 2.59
CSNK1G3-204ENST00000508708 C4AP0C0L4 1744 aa31.22■■■□□ 2.59
CSNK1G3-204ENST00000508708 RTCBQ9Y3I0 505 aaKnown RBP31.22■■■□□ 2.59
CSNK1G3-204ENST00000508708 CRKLP46109 303 aaKnown RBP31.21■■■□□ 2.59
CSNK1G3-204ENST00000508708 PLEKHF1Q96S99 279 aa31.21■■■□□ 2.59
CSNK1G3-204ENST00000508708 RPS6KA4O75676 772 aa31.2■■■□□ 2.59
CSNK1G3-204ENST00000508708 TEFQ10587 303 aa31.2■■■□□ 2.59
CSNK1G3-204ENST00000508708 DNAJC10Q8IXB1 793 aa31.2■■■□□ 2.59
CSNK1G3-204ENST00000508708 ADRA2BP18089 450 aa31.19■■■□□ 2.58
CSNK1G3-204ENST00000508708 INTS5Q6P9B9 1019 aaKnown RBP31.17■■■□□ 2.58
CSNK1G3-204ENST00000508708 GOLGB1Q14789 3259 aaKnown RBP31.16■■■□□ 2.58
CSNK1G3-204ENST00000508708 TRAPPC3LQ5T215 181 aa31.16■■■□□ 2.58
CSNK1G3-204ENST00000508708 ZNF790Q6PG37 636 aa31.16■■■□□ 2.58
CSNK1G3-204ENST00000508708 VSIG10Q8N0Z9 540 aa31.16■■■□□ 2.58
CSNK1G3-204ENST00000508708 PRKRIP1Q9H875 184 aaPredicted RBP31.16■■■□□ 2.58
CSNK1G3-204ENST00000508708 DLG5Q8TDM6 1919 aa31.16■■■□□ 2.58
CSNK1G3-204ENST00000508708 ARHGEF1Q92888 912 aaKnown RBP31.15■■■□□ 2.58
CSNK1G3-204ENST00000508708 HTATSF1O43719 755 aaKnown RBP31.14■■■□□ 2.58
CSNK1G3-204ENST00000508708 CYP19A1P11511 503 aaPredicted RBP31.14■■■□□ 2.58
CSNK1G3-204ENST00000508708 MCM10Q7L590 875 aa31.14■■■□□ 2.58
CSNK1G3-204ENST00000508708 TTC5Q8N0Z6 440 aa31.13■■■□□ 2.57
CSNK1G3-204ENST00000508708 ZNF496Q96IT1 587 aaPredicted RBP31.13■■■□□ 2.57
CSNK1G3-204ENST00000508708 DCTN1Q14203 1278 aa31.12■■■□□ 2.57
CSNK1G3-204ENST00000508708 RTF1Q92541 710 aaKnown RBP31.12■■■□□ 2.57
CSNK1G3-204ENST00000508708 CCDC87Q9NVE4 849 aa31.12■■■□□ 2.57
CSNK1G3-204ENST00000508708 HEG1Q9ULI3 1381 aa31.12■■■□□ 2.57
CSNK1G3-204ENST00000508708 SOS1Q07889 1333 aaPredicted RBP31.1■■■□□ 2.57
CSNK1G3-204ENST00000508708 KLHL34Q8N239 644 aa31.1■■■□□ 2.57
CSNK1G3-204ENST00000508708 NLGN2Q8NFZ4 835 aa31.1■■■□□ 2.57
CSNK1G3-204ENST00000508708 BTBD11A6QL63 1104 aa31.08■■■□□ 2.57
CSNK1G3-204ENST00000508708 KCNQ3O43525 872 aa31.08■■■□□ 2.57
CSNK1G3-204ENST00000508708 GYS1P13807 737 aa31.08■■■□□ 2.57
CSNK1G3-204ENST00000508708 NFE2L2Q16236 605 aa31.08■■■□□ 2.57
CSNK1G3-204ENST00000508708 ZBTB1Q9Y2K1 713 aa31.08■■■□□ 2.57
CSNK1G3-204ENST00000508708 USP42Q9H9J4 1324 aaKnown RBP31.07■■■□□ 2.56
CSNK1G3-204ENST00000508708 NEFMP07197 916 aa31.07■■■□□ 2.56
CSNK1G3-204ENST00000508708 RFC4P35249 363 aa31.07■■■□□ 2.56
CSNK1G3-204ENST00000508708 PNNQ9H307 717 aaKnown RBP31.07■■■□□ 2.56
CSNK1G3-204ENST00000508708 MAPK8IP3Q9UPT6 1336 aa31.05■■■□□ 2.56
CSNK1G3-204ENST00000508708 FMNL2Q96PY5 1086 aa31.05■■■□□ 2.56
CSNK1G3-204ENST00000508708 CD2APQ9Y5K6 639 aa31.05■■■□□ 2.56
CSNK1G3-204ENST00000508708 MMP10P09238 476 aa31.04■■■□□ 2.56
CSNK1G3-204ENST00000508708 NLGN1Q8N2Q7 840 aa31.04■■■□□ 2.56
CSNK1G3-204ENST00000508708 SRP68Q9UHB9 627 aaKnown RBP31.04■■■□□ 2.56
CSNK1G3-204ENST00000508708 COL15A1P39059 1388 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms