RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
ATP2C1-214ENST00000508532 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
ATP2C1-214ENST00000508532 NUP62CLQ9H1M0 184 aa17.5■□□□□ 0.39
ATP2C1-214ENST00000508532 PTPRCP08575 1304 aa17.49■□□□□ 0.39
ATP2C1-214ENST00000508532 CCDC112Q8NEF3 446 aa17.49■□□□□ 0.39
ATP2C1-214ENST00000508532 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
ATP2C1-214ENST00000508532 PRPF40BQ6NWY9 871 aaKnown RBP17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 CCDC61Q9Y6R9 512 aa17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 ABCC4O15439 1325 aa17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 UBE2HP62256 183 aa17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 MSH6P52701 1360 aa17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
ATP2C1-214ENST00000508532 MAP3K11Q16584 847 aa17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 ZSCAN22P10073 491 aaPredicted RBP17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 G2E3Q7L622 706 aa17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 TRPM2O94759 1503 aa17.47■□□□□ 0.39
ATP2C1-214ENST00000508532 CD109Q6YHK3 1445 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 TEFQ10587 303 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 FLIIQ13045 1269 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 IQGAP3Q86VI3 1631 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 CPA1P15085 419 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 FILIP1Q7Z7B0 1213 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 GJB2P29033 226 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
ATP2C1-214ENST00000508532 PREX2Q70Z35 1606 aa17.46■□□□□ 0.38
ATP2C1-214ENST00000508532 CHMLP26374 656 aa17.46■□□□□ 0.38
ATP2C1-214ENST00000508532 BRD1O95696 1058 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 DDIT3P35638 169 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 HSP90AB2PQ58FF8 381 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 FSD1Q9BTV5 496 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 PDCP20941 246 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 NECAB1Q8N987 351 aa17.45■□□□□ 0.38
ATP2C1-214ENST00000508532 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.38
ATP2C1-214ENST00000508532 MYRIPQ8NFW9 859 aa17.44■□□□□ 0.38
ATP2C1-214ENST00000508532 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 FOXO3O43524 673 aa17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 INTS4Q96HW7 963 aaKnown RBP17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 UNC13BO14795 1591 aa17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 ANAPC15P60006 121 aa17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 TCEANC2Q96MN5 208 aa17.43■□□□□ 0.38
ATP2C1-214ENST00000508532 IL13P35225 146 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 NLRP6P59044 892 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 PIBF1Q8WXW3 757 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 TNNT1P13805 278 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 SMAP1Q8IYB5 467 aaPredicted RBP17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 LAMC1P11047 1609 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 WASLO00401 505 aaPredicted RBP17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 SYT1P21579 422 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 KDM4AO75164 1064 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 PSMA5P28066 241 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 CCDC186Q7Z3E2 898 aa17.42■□□□□ 0.38
ATP2C1-214ENST00000508532 AK2P54819 239 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 SIL1Q9H173 461 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 GNL2Q13823 731 aaKnown RBP17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 HDAC5Q9UQL6 1122 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 F13A1P00488 732 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 SDF4Q9BRK5 362 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 ZDHHC9Q9Y397 364 aa17.41■□□□□ 0.38
ATP2C1-214ENST00000508532 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 BLOC1S2Q6QNY1 142 aa17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 CLTCL1P53675 1640 aa17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 PTGS1P23219 599 aa17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 TPM4P67936 248 aa17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-214ENST00000508532 CCAR2Q8N163 923 aaKnown RBP17.39■□□□□ 0.38
ATP2C1-214ENST00000508532 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.38
ATP2C1-214ENST00000508532 CHMP4AQ9BY43 222 aa17.39■□□□□ 0.38
ATP2C1-214ENST00000508532 MYO5CQ9NQX4 1742 aa17.39■□□□□ 0.37
ATP2C1-214ENST00000508532 AACSQ86V21 672 aa17.39■□□□□ 0.37
ATP2C1-214ENST00000508532 PNMA6EA0A0J9YXQ4 647 aa17.39■□□□□ 0.37
ATP2C1-214ENST00000508532 PDLIM2Q96JY6 352 aa17.39■□□□□ 0.37
ATP2C1-214ENST00000508532 TRMT1Q9NXH9 659 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-214ENST00000508532 CGNQ9P2M7 1197 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-214ENST00000508532 FAM173BQ6P4H8 233 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 ERICH4A6NGS2 130 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 ATP7AQ04656 1500 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
ATP2C1-214ENST00000508532 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms