RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 ITPK1Q13572 414 aa16.39■□□□□ 0.21
CLDND1-218ENST00000508503 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
CLDND1-218ENST00000508503 HMOX1P09601 288 aa16.38■□□□□ 0.21
CLDND1-218ENST00000508503 CABP4P57796 275 aa16.38■□□□□ 0.21
CLDND1-218ENST00000508503 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
CLDND1-218ENST00000508503 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
CLDND1-218ENST00000508503 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
CLDND1-218ENST00000508503 POLD1P28340 1107 aa16.37■□□□□ 0.21
CLDND1-218ENST00000508503 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
CLDND1-218ENST00000508503 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
CLDND1-218ENST00000508503 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
CLDND1-218ENST00000508503 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
CLDND1-218ENST00000508503 SSFA2P28290 1259 aa16.36■□□□□ 0.21
CLDND1-218ENST00000508503 PPP2R1AP30153 589 aa16.36■□□□□ 0.21
CLDND1-218ENST00000508503 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
CLDND1-218ENST00000508503 AK7Q96M32 723 aa16.36■□□□□ 0.21
CLDND1-218ENST00000508503 LGR6Q9HBX8 967 aa16.36■□□□□ 0.21
CLDND1-218ENST00000508503 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
CLDND1-218ENST00000508503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
CLDND1-218ENST00000508503 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
CLDND1-218ENST00000508503 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-218ENST00000508503 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
CLDND1-218ENST00000508503 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
CLDND1-218ENST00000508503 MSH5O43196 834 aa16.33■□□□□ 0.2
CLDND1-218ENST00000508503 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
CLDND1-218ENST00000508503 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
CLDND1-218ENST00000508503 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
CLDND1-218ENST00000508503 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
CLDND1-218ENST00000508503 CNTNAP4Q9C0A0 1308 aa16.31■□□□□ 0.2
CLDND1-218ENST00000508503 RPS6KA4O75676 772 aa16.31■□□□□ 0.2
CLDND1-218ENST00000508503 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-218ENST00000508503 MRC1P22897 1456 aa16.3■□□□□ 0.2
CLDND1-218ENST00000508503 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
CLDND1-218ENST00000508503 GNPATO15228 680 aa16.3■□□□□ 0.2
CLDND1-218ENST00000508503 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
CLDND1-218ENST00000508503 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
CLDND1-218ENST00000508503 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
CLDND1-218ENST00000508503 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
CLDND1-218ENST00000508503 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CLDND1-218ENST00000508503 ADRA2BP18089 450 aa16.29■□□□□ 0.2
CLDND1-218ENST00000508503 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
CLDND1-218ENST00000508503 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
CLDND1-218ENST00000508503 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
CLDND1-218ENST00000508503 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
CLDND1-218ENST00000508503 FCHSD2O94868 740 aa16.28■□□□□ 0.2
CLDND1-218ENST00000508503 PHF14O94880 888 aa16.28■□□□□ 0.2
CLDND1-218ENST00000508503 TRAPPC3LQ5T215 181 aa16.28■□□□□ 0.2
CLDND1-218ENST00000508503 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
CLDND1-218ENST00000508503 CD2APQ9Y5K6 639 aa16.28■□□□□ 0.2
CLDND1-218ENST00000508503 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
CLDND1-218ENST00000508503 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
CLDND1-218ENST00000508503 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
CLDND1-218ENST00000508503 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
CLDND1-218ENST00000508503 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
CLDND1-218ENST00000508503 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
CLDND1-218ENST00000508503 CRKLP46109 303 aaKnown RBP16.25■□□□□ 0.19
CLDND1-218ENST00000508503 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
CLDND1-218ENST00000508503 NLGN1Q8N2Q7 840 aa16.25■□□□□ 0.19
CLDND1-218ENST00000508503 TJP1Q07157 1748 aa16.25■□□□□ 0.19
CLDND1-218ENST00000508503 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
CLDND1-218ENST00000508503 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
CLDND1-218ENST00000508503 YY1P25490 414 aa16.24■□□□□ 0.19
CLDND1-218ENST00000508503 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLDND1-218ENST00000508503 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-218ENST00000508503 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
CLDND1-218ENST00000508503 KCPQ6ZWJ8 1503 aa16.23■□□□□ 0.19
CLDND1-218ENST00000508503 GYS1P13807 737 aa16.22■□□□□ 0.19
CLDND1-218ENST00000508503 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.19
CLDND1-218ENST00000508503 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.19
CLDND1-218ENST00000508503 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
CLDND1-218ENST00000508503 RFC4P35249 363 aa16.21■□□□□ 0.19
CLDND1-218ENST00000508503 TEFQ10587 303 aa16.21■□□□□ 0.19
CLDND1-218ENST00000508503 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
CLDND1-218ENST00000508503 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
CLDND1-218ENST00000508503 CHD4Q14839 1912 aa16.2■□□□□ 0.18
CLDND1-218ENST00000508503 MMP10P09238 476 aa16.2■□□□□ 0.18
CLDND1-218ENST00000508503 RALBP1Q15311 655 aa16.2■□□□□ 0.18
CLDND1-218ENST00000508503 GPR162Q16538 588 aa16.2■□□□□ 0.18
CLDND1-218ENST00000508503 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
CLDND1-218ENST00000508503 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
CLDND1-218ENST00000508503 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLDND1-218ENST00000508503 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
CLDND1-218ENST00000508503 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
CLDND1-218ENST00000508503 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
CLDND1-218ENST00000508503 SOS1Q07889 1333 aaPredicted RBP16.18■□□□□ 0.18
CLDND1-218ENST00000508503 USP42Q9H9J4 1324 aaKnown RBP16.18■□□□□ 0.18
CLDND1-218ENST00000508503 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
CLDND1-218ENST00000508503 TM4SF1P30408 202 aa16.17■□□□□ 0.18
CLDND1-218ENST00000508503 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
CLDND1-218ENST00000508503 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
CLDND1-218ENST00000508503 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
CLDND1-218ENST00000508503 STARD3NLO95772 234 aa16.16■□□□□ 0.18
CLDND1-218ENST00000508503 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
CLDND1-218ENST00000508503 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
CLDND1-218ENST00000508503 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
CLDND1-218ENST00000508503 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
CLDND1-218ENST00000508503 TGFB2P61812 414 aa16.15■□□□□ 0.18
CLDND1-218ENST00000508503 FKBP8Q14318 412 aa16.15■□□□□ 0.18
CLDND1-218ENST00000508503 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
CLDND1-218ENST00000508503 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms