RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 USP17L2Q6R6M4 530 aa10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 USP17L1Q7RTZ2 530 aa10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 GAS2L1Q99501 681 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 TIMMDC1Q9NPL8 285 aa10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
UBE2D3-225ENST00000508476 ATP9BO43861 1147 aa10□□□□□ -0.81
UBE2D3-225ENST00000508476 INSM1Q01101 510 aaPredicted RBP10□□□□□ -0.81
UBE2D3-225ENST00000508476 C4orf17Q53FE4 359 aa10□□□□□ -0.81
UBE2D3-225ENST00000508476 TMEM214Q6NUQ4 689 aaKnown RBP10□□□□□ -0.81
UBE2D3-225ENST00000508476 RIPOR1Q6ZS17 1223 aa10□□□□□ -0.81
UBE2D3-225ENST00000508476 SV2AQ7L0J3 742 aa10□□□□□ -0.81
UBE2D3-225ENST00000508476 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
UBE2D3-225ENST00000508476 DBN1Q16643 649 aa9.99□□□□□ -0.81
UBE2D3-225ENST00000508476 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
UBE2D3-225ENST00000508476 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
UBE2D3-225ENST00000508476 KIAA1024Q9UPX6 916 aa9.99□□□□□ -0.81
UBE2D3-225ENST00000508476 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
UBE2D3-225ENST00000508476 LZTS3O60299 673 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 PSME1Q06323 249 aa9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 PLEKHM2Q8IWE5 1019 aa9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 CALR3Q96L12 384 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 TFIP11Q9UBB9 837 aaKnown RBP9.98□□□□□ -0.81
UBE2D3-225ENST00000508476 SMTNP53814 917 aa9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 CLDN10P78369 228 aa9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 WDR44Q5JSH3 913 aa9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 GNASQ5JWF2 1037 aa9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 GPAMQ9HCL2 828 aa9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
UBE2D3-225ENST00000508476 GPR25O00155 361 aa9.96□□□□□ -0.82
UBE2D3-225ENST00000508476 THBS1P07996 1170 aa9.96□□□□□ -0.82
UBE2D3-225ENST00000508476 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
UBE2D3-225ENST00000508476 RHBDD1Q8TEB9 315 aa9.96□□□□□ -0.82
UBE2D3-225ENST00000508476 ZBTB7BO15156 539 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 F11P03951 625 aa9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 ZSCAN1Q8NBB4 408 aa9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 ZNF358Q9NW07 568 aa9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 MKRN1Q9UHC7 482 aaKnown RBP9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 MAFBQ9Y5Q3 323 aaPredicted RBP9.95□□□□□ -0.82
UBE2D3-225ENST00000508476 PALM3A6NDB9 673 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-225ENST00000508476 PLA2G4AP47712 749 aa9.94□□□□□ -0.82
UBE2D3-225ENST00000508476 GAS6Q14393 721 aa9.94□□□□□ -0.82
UBE2D3-225ENST00000508476 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
UBE2D3-225ENST00000508476 IQSEC3Q9UPP2 1182 aaPredicted RBP9.94□□□□□ -0.82
UBE2D3-225ENST00000508476 A6NJY4 79 aa9.93□□□□□ -0.82
UBE2D3-225ENST00000508476 MTFR1Q15390 333 aa9.93□□□□□ -0.82
UBE2D3-225ENST00000508476 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
UBE2D3-225ENST00000508476 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
UBE2D3-225ENST00000508476 GTPBP3Q969Y2 492 aaKnown RBP9.93□□□□□ -0.82
UBE2D3-225ENST00000508476 PPP1R12CQ9BZL4 782 aa9.93□□□□□ -0.82
UBE2D3-225ENST00000508476 A0A1B0GTH6 734 aa9.92□□□□□ -0.82
UBE2D3-225ENST00000508476 MSX1P28360 303 aa9.92□□□□□ -0.82
UBE2D3-225ENST00000508476 TRIM50Q86XT4 487 aa9.92□□□□□ -0.82
UBE2D3-225ENST00000508476 RUBCNLQ9H714 662 aa9.92□□□□□ -0.82
UBE2D3-225ENST00000508476 CCDC102BQ68D86 513 aa9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 TNS4Q8IZW8 715 aa9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 ZNF594Q96JF6 807 aaPredicted RBP9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 NUCKS1Q9H1E3 243 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 DNAAF2Q9NVR5 837 aaKnown RBP9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 GTF3C3Q9Y5Q9 886 aa9.91□□□□□ -0.82
UBE2D3-225ENST00000508476 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
UBE2D3-225ENST00000508476 TBCELQ5QJ74 424 aa9.9□□□□□ -0.82
UBE2D3-225ENST00000508476 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
UBE2D3-225ENST00000508476 PARP3Q9Y6F1 533 aa9.9□□□□□ -0.82
UBE2D3-225ENST00000508476 H7C1W4 665 aa9.89□□□□□ -0.83
UBE2D3-225ENST00000508476 DKK1O94907 266 aa9.89□□□□□ -0.83
UBE2D3-225ENST00000508476 ATP1A2P50993 1020 aa9.89□□□□□ -0.83
UBE2D3-225ENST00000508476 EPHA4P54764 986 aa9.89□□□□□ -0.83
UBE2D3-225ENST00000508476 GMCL1Q96IK5 515 aa9.89□□□□□ -0.83
UBE2D3-225ENST00000508476 SCHIP1Q9P0W5 487 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-225ENST00000508476 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 BACH1O14867 736 aa9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 ATP4AP20648 1035 aa9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 WHAMMQ8TF30 809 aa9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 AIDAQ96BJ3 306 aa9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 CABP1Q9NZU7 370 aa9.88□□□□□ -0.83
UBE2D3-225ENST00000508476 RASA1P20936 1047 aa9.87□□□□□ -0.83
UBE2D3-225ENST00000508476 FOXK2Q01167 660 aa9.87□□□□□ -0.83
UBE2D3-225ENST00000508476 UBAP2LQ14157 1087 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-225ENST00000508476 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
UBE2D3-225ENST00000508476 LARGE2Q8N3Y3 721 aa9.87□□□□□ -0.83
UBE2D3-225ENST00000508476 ZDHHC1Q8WTX9 485 aa9.87□□□□□ -0.83
UBE2D3-225ENST00000508476 CRTC2Q53ET0 693 aaPredicted RBP9.86□□□□□ -0.83
UBE2D3-225ENST00000508476 CFAP70Q5T0N1 1121 aa9.86□□□□□ -0.83
UBE2D3-225ENST00000508476 SLC9A9Q8IVB4 645 aa9.86□□□□□ -0.83
UBE2D3-225ENST00000508476 SIX5Q8N196 739 aa9.86□□□□□ -0.83
UBE2D3-225ENST00000508476 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
UBE2D3-225ENST00000508476 ADAMTS2O95450 1211 aa9.85□□□□□ -0.83
UBE2D3-225ENST00000508476 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
UBE2D3-225ENST00000508476 TSEN2Q8NCE0 465 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-225ENST00000508476 SLURP2P0DP57 97 aa9.84□□□□□ -0.83
UBE2D3-225ENST00000508476 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
UBE2D3-225ENST00000508476 TXLNAP40222 546 aa9.84□□□□□ -0.83
UBE2D3-225ENST00000508476 SH3PXD2AQ5TCZ1 1133 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms