RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
HTT-204ENST00000508321 SF3B2Q13435 895 aaKnown RBP13.43□□□□□ -0.26
HTT-204ENST00000508321 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
HTT-204ENST00000508321 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
HTT-204ENST00000508321 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
HTT-204ENST00000508321 TRIM37O94972 964 aa13.42□□□□□ -0.26
HTT-204ENST00000508321 MCM10Q7L590 875 aa13.42□□□□□ -0.26
HTT-204ENST00000508321 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
HTT-204ENST00000508321 ACSBG1Q96GR2 724 aa13.42□□□□□ -0.26
HTT-204ENST00000508321 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
HTT-204ENST00000508321 RRP7AQ9Y3A4 280 aaKnown RBP13.42□□□□□ -0.26
HTT-204ENST00000508321 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
HTT-204ENST00000508321 IL16Q14005 1332 aa13.41□□□□□ -0.26
HTT-204ENST00000508321 KCPQ6ZWJ8 1503 aa13.41□□□□□ -0.26
HTT-204ENST00000508321 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
HTT-204ENST00000508321 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
HTT-204ENST00000508321 C5P01031 1676 aa13.4□□□□□ -0.26
HTT-204ENST00000508321 BAG6P46379 1132 aa13.4□□□□□ -0.26
HTT-204ENST00000508321 PIGBQ92521 554 aa13.4□□□□□ -0.26
HTT-204ENST00000508321 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
HTT-204ENST00000508321 PALLDQ8WX93 1383 aa13.4□□□□□ -0.26
HTT-204ENST00000508321 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
HTT-204ENST00000508321 TJP1Q07157 1748 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 NUP188Q5SRE5 1749 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 PLSCR1O15162 318 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 KCNQ2O43526 872 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
HTT-204ENST00000508321 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
HTT-204ENST00000508321 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
HTT-204ENST00000508321 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
HTT-204ENST00000508321 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
HTT-204ENST00000508321 TTC5Q8N0Z6 440 aa13.38□□□□□ -0.27
HTT-204ENST00000508321 APBA3O96018 575 aa13.37□□□□□ -0.27
HTT-204ENST00000508321 GNAI1P63096 354 aa13.37□□□□□ -0.27
HTT-204ENST00000508321 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
HTT-204ENST00000508321 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
HTT-204ENST00000508321 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
HTT-204ENST00000508321 ZBED9Q6R2W3 1325 aa13.37□□□□□ -0.27
HTT-204ENST00000508321 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
HTT-204ENST00000508321 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
HTT-204ENST00000508321 QSER1Q2KHR3 1735 aa13.36□□□□□ -0.27
HTT-204ENST00000508321 CHL1O00533 1208 aa13.35□□□□□ -0.27
HTT-204ENST00000508321 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
HTT-204ENST00000508321 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
HTT-204ENST00000508321 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
HTT-204ENST00000508321 C4BP0C0L5 1744 aa13.34□□□□□ -0.27
HTT-204ENST00000508321 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
HTT-204ENST00000508321 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
HTT-204ENST00000508321 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
HTT-204ENST00000508321 MYH16Q9H6N6 1097 aa13.34□□□□□ -0.27
HTT-204ENST00000508321 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
HTT-204ENST00000508321 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
HTT-204ENST00000508321 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
HTT-204ENST00000508321 LOC102724428A0A0B4J2F2 783 aa13.33□□□□□ -0.28
HTT-204ENST00000508321 SIK1P57059 783 aa13.33□□□□□ -0.28
HTT-204ENST00000508321 E9PSI1 815 aa13.32□□□□□ -0.28
HTT-204ENST00000508321 HOXB7P09629 217 aa13.32□□□□□ -0.28
HTT-204ENST00000508321 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
HTT-204ENST00000508321 CAMKK2Q96RR4 588 aa13.32□□□□□ -0.28
HTT-204ENST00000508321 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
HTT-204ENST00000508321 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
HTT-204ENST00000508321 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
HTT-204ENST00000508321 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
HTT-204ENST00000508321 TXNRD1Q16881 649 aa13.31□□□□□ -0.28
HTT-204ENST00000508321 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
HTT-204ENST00000508321 MBIPQ9NS73 344 aa13.31□□□□□ -0.28
HTT-204ENST00000508321 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
HTT-204ENST00000508321 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
HTT-204ENST00000508321 UBR3Q6ZT12 1888 aa13.3□□□□□ -0.28
HTT-204ENST00000508321 EIF4A1P60842 406 aaKnown RBP13.3□□□□□ -0.28
HTT-204ENST00000508321 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
HTT-204ENST00000508321 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
HTT-204ENST00000508321 CNTNAP4Q9C0A0 1308 aa13.3□□□□□ -0.28
HTT-204ENST00000508321 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
HTT-204ENST00000508321 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
HTT-204ENST00000508321 SNRPA1P09661 255 aaKnown RBP13.29□□□□□ -0.28
HTT-204ENST00000508321 ATP6V1AP38606 617 aa13.29□□□□□ -0.28
HTT-204ENST00000508321 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
HTT-204ENST00000508321 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
HTT-204ENST00000508321 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
HTT-204ENST00000508321 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
HTT-204ENST00000508321 MYH14Q7Z406 1995 aaKnown RBP13.27□□□□□ -0.28
HTT-204ENST00000508321 GIGYF1O75420 1035 aaPredicted RBP13.27□□□□□ -0.29
HTT-204ENST00000508321 STARD3NLO95772 234 aa13.27□□□□□ -0.29
HTT-204ENST00000508321 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
HTT-204ENST00000508321 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.29
HTT-204ENST00000508321 MIS18AQ9NYP9 233 aa13.27□□□□□ -0.29
HTT-204ENST00000508321 LRP5O75197 1615 aa13.27□□□□□ -0.29
HTT-204ENST00000508321 SENP3-EIF4A1A0A087X0R7 540 aa13.26□□□□□ -0.29
HTT-204ENST00000508321 KCNQ3O43525 872 aa13.26□□□□□ -0.29
HTT-204ENST00000508321 C4AP0C0L4 1744 aa13.26□□□□□ -0.29
HTT-204ENST00000508321 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
HTT-204ENST00000508321 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
HTT-204ENST00000508321 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
HTT-204ENST00000508321 ITPK1Q13572 414 aa13.25□□□□□ -0.29
HTT-204ENST00000508321 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
HTT-204ENST00000508321 PROM2Q8N271 834 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms