RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	COL23A1	Q86Y22	540 aa	Predicted RBP	18.62	■□□□□ 0.57
CDHR2-204	ENST00000508085	SIPA1L3	O60292	1781 aa	Predicted RBP	18.62	■□□□□ 0.57
CDHR2-204	ENST00000508085	MRC1	P22897	1456 aa		18.61	■□□□□ 0.57
CDHR2-204	ENST00000508085	ITPK1	Q13572	414 aa		18.61	■□□□□ 0.57
CDHR2-204	ENST00000508085	C1orf141	Q5JVX7	400 aa		18.61	■□□□□ 0.57
CDHR2-204	ENST00000508085	LINC00116	Q8NCU8	138 aa		18.61	■□□□□ 0.57
CDHR2-204	ENST00000508085	UBR2	Q8IWV8	1755 aa		18.6	■□□□□ 0.57
CDHR2-204	ENST00000508085	C4A	P0C0L4	1744 aa		18.6	■□□□□ 0.57
CDHR2-204	ENST00000508085	SLC4A9	Q96Q91	983 aa		18.59	■□□□□ 0.57
CDHR2-204	ENST00000508085	ARX	Q96QS3	562 aa		18.59	■□□□□ 0.57
CDHR2-204	ENST00000508085	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.59	■□□□□ 0.57
CDHR2-204	ENST00000508085	CABP4	P57796	275 aa		18.58	■□□□□ 0.56
CDHR2-204	ENST00000508085	AKAP4	Q5JQC9	854 aa		18.58	■□□□□ 0.56
CDHR2-204	ENST00000508085	SMIM5	Q71RC9	77 aa		18.58	■□□□□ 0.56
CDHR2-204	ENST00000508085	MAP3K5	Q99683	1374 aa		18.57	■□□□□ 0.56
CDHR2-204	ENST00000508085	PPP2R1A	P30153	589 aa		18.57	■□□□□ 0.56
CDHR2-204	ENST00000508085	ATP6V1A	P38606	617 aa		18.57	■□□□□ 0.56
CDHR2-204	ENST00000508085	MTHFSD	Q2M296	383 aa	Known RBP	18.57	■□□□□ 0.56
CDHR2-204	ENST00000508085	SYT17	Q9BSW7	474 aa		18.57	■□□□□ 0.56
CDHR2-204	ENST00000508085	U2SURP	O15042	1029 aa	Known RBP	18.56	■□□□□ 0.56
CDHR2-204	ENST00000508085	MSH5	O43196	834 aa		18.56	■□□□□ 0.56
CDHR2-204	ENST00000508085	NFATC2IP	Q8NCF5	419 aa		18.56	■□□□□ 0.56
CDHR2-204	ENST00000508085	AK7	Q96M32	723 aa		18.56	■□□□□ 0.56
CDHR2-204	ENST00000508085	HMGB2	P26583	209 aa	Known RBP	18.55	■□□□□ 0.56
CDHR2-204	ENST00000508085	MSL1	Q68DK7	614 aa		18.55	■□□□□ 0.56
CDHR2-204	ENST00000508085	LGR6	Q9HBX8	967 aa		18.55	■□□□□ 0.56
CDHR2-204	ENST00000508085	CHD4	Q14839	1912 aa		18.55	■□□□□ 0.56
CDHR2-204	ENST00000508085	DLG5	Q8TDM6	1919 aa		18.55	■□□□□ 0.56
CDHR2-204	ENST00000508085	FLAD1	Q8NFF5	587 aa		18.54	■□□□□ 0.56
CDHR2-204	ENST00000508085	RBM42	Q9BTD8	480 aa	Known RBP	18.54	■□□□□ 0.56
CDHR2-204	ENST00000508085	KCP	Q6ZWJ8	1503 aa		18.54	■□□□□ 0.56
CDHR2-204	ENST00000508085	UTRN	P46939	3433 aa		18.53	■□□□□ 0.56
CDHR2-204	ENST00000508085	RNMT	O43148	476 aa	Known RBP	18.53	■□□□□ 0.56
CDHR2-204	ENST00000508085	PHF14	O94880	888 aa		18.53	■□□□□ 0.56
CDHR2-204	ENST00000508085	POLD1	P28340	1107 aa		18.53	■□□□□ 0.56
CDHR2-204	ENST00000508085	GOLGB1	Q14789	3259 aa	Known RBP	18.52	■□□□□ 0.56
CDHR2-204	ENST00000508085	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.52	■□□□□ 0.56
CDHR2-204	ENST00000508085	GNPAT	O15228	680 aa		18.52	■□□□□ 0.56
CDHR2-204	ENST00000508085	CFAP53	Q96M91	514 aa		18.52	■□□□□ 0.56
CDHR2-204	ENST00000508085	SLC52A2	Q9HAB3	445 aa		18.52	■□□□□ 0.56
CDHR2-204	ENST00000508085	SSFA2	P28290	1259 aa		18.51	■□□□□ 0.55
CDHR2-204	ENST00000508085	RSPH6A	Q9H0K4	717 aa		18.51	■□□□□ 0.55
CDHR2-204	ENST00000508085	PTCD1	O75127	700 aa	Known RBP	18.5	■□□□□ 0.55
CDHR2-204	ENST00000508085	CNTNAP4	Q9C0A0	1308 aa		18.49	■□□□□ 0.55
CDHR2-204	ENST00000508085	KIF13B	Q9NQT8	1826 aa		18.49	■□□□□ 0.55
CDHR2-204	ENST00000508085	PRKAR2B	P31323	418 aa		18.48	■□□□□ 0.55
CDHR2-204	ENST00000508085	RC3H1	Q5TC82	1133 aa	Known RBP	18.48	■□□□□ 0.55
CDHR2-204	ENST00000508085	PHACTR3	Q96KR7	559 aa		18.48	■□□□□ 0.55
CDHR2-204	ENST00000508085	KLHL34	Q8N239	644 aa		18.47	■□□□□ 0.55
CDHR2-204	ENST00000508085	NLGN2	Q8NFZ4	835 aa		18.47	■□□□□ 0.55
CDHR2-204	ENST00000508085	KIAA1551	Q9HCM1	1747 aa		18.46	■□□□□ 0.55
CDHR2-204	ENST00000508085	SLC39A6	Q13433	755 aa		18.46	■□□□□ 0.55
CDHR2-204	ENST00000508085	GAS2L2	Q8NHY3	880 aa		18.46	■□□□□ 0.55
CDHR2-204	ENST00000508085	NUDC	Q9Y266	331 aa		18.46	■□□□□ 0.55
CDHR2-204	ENST00000508085	GNAT3	A8MTJ3	354 aa		18.45	■□□□□ 0.54
CDHR2-204	ENST00000508085	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.45	■□□□□ 0.54
CDHR2-204	ENST00000508085	CRKL	P46109	303 aa	Known RBP	18.45	■□□□□ 0.54
CDHR2-204	ENST00000508085	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.45	■□□□□ 0.54
CDHR2-204	ENST00000508085	IL17RE	Q8NFR9	667 aa		18.45	■□□□□ 0.54
CDHR2-204	ENST00000508085	DCAF8L1	A6NGE4	600 aa		18.44	■□□□□ 0.54
CDHR2-204	ENST00000508085	RPS6KA4	O75676	772 aa		18.44	■□□□□ 0.54
CDHR2-204	ENST00000508085	RTCB	Q9Y3I0	505 aa	Known RBP	18.44	■□□□□ 0.54
CDHR2-204	ENST00000508085	CEMIP	Q8WUJ3	1361 aa		18.43	■□□□□ 0.54
CDHR2-204	ENST00000508085	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.42	■□□□□ 0.54
CDHR2-204	ENST00000508085	DNAJC10	Q8IXB1	793 aa		18.42	■□□□□ 0.54
CDHR2-204	ENST00000508085	ARHGEF1	Q92888	912 aa	Known RBP	18.42	■□□□□ 0.54
CDHR2-204	ENST00000508085	FCHSD2	O94868	740 aa		18.41	■□□□□ 0.54
CDHR2-204	ENST00000508085	ADRA2B	P18089	450 aa		18.41	■□□□□ 0.54
CDHR2-204	ENST00000508085	DDX10	Q13206	875 aa	Known RBP	18.41	■□□□□ 0.54
CDHR2-204	ENST00000508085	TRAPPC3L	Q5T215	181 aa		18.41	■□□□□ 0.54
CDHR2-204	ENST00000508085	INTS5	Q6P9B9	1019 aa	Known RBP	18.41	■□□□□ 0.54
CDHR2-204	ENST00000508085	BRCA1	P38398	1863 aa	Known RBP	18.4	■□□□□ 0.54
CDHR2-204	ENST00000508085	AFDN	P55196	1824 aa	Known RBP	18.39	■□□□□ 0.54
CDHR2-204	ENST00000508085	CYP19A1	P11511	503 aa	Predicted RBP	18.39	■□□□□ 0.53
CDHR2-204	ENST00000508085	GYS1	P13807	737 aa		18.39	■□□□□ 0.53
CDHR2-204	ENST00000508085	YY1	P25490	414 aa		18.39	■□□□□ 0.53
CDHR2-204	ENST00000508085	TEF	Q10587	303 aa		18.39	■□□□□ 0.53
CDHR2-204	ENST00000508085	KDM3B	Q7LBC6	1761 aa		18.39	■□□□□ 0.53
CDHR2-204	ENST00000508085	CCDC87	Q9NVE4	849 aa		18.38	■□□□□ 0.53
CDHR2-204	ENST00000508085	CD2AP	Q9Y5K6	639 aa		18.38	■□□□□ 0.53
CDHR2-204	ENST00000508085	MMP10	P09238	476 aa		18.37	■□□□□ 0.53
CDHR2-204	ENST00000508085	VSIG10	Q8N0Z9	540 aa		18.37	■□□□□ 0.53
CDHR2-204	ENST00000508085	SRP68	Q9UHB9	627 aa	Known RBP	18.37	■□□□□ 0.53
CDHR2-204	ENST00000508085	SCN7A	Q01118	1682 aa		18.37	■□□□□ 0.53
CDHR2-204	ENST00000508085	RFC4	P35249	363 aa		18.36	■□□□□ 0.53
CDHR2-204	ENST00000508085	SOS1	Q07889	1333 aa	Predicted RBP	18.36	■□□□□ 0.53
CDHR2-204	ENST00000508085	RALBP1	Q15311	655 aa		18.36	■□□□□ 0.53
CDHR2-204	ENST00000508085	ZNF790	Q6PG37	636 aa		18.36	■□□□□ 0.53
CDHR2-204	ENST00000508085	ZNF496	Q96IT1	587 aa	Predicted RBP	18.36	■□□□□ 0.53
CDHR2-204	ENST00000508085	LAMB4	A4D0S4	1761 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	HEG1	Q9ULI3	1381 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	USP42	Q9H9J4	1324 aa	Known RBP	18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	YBX3	P16989	372 aa	Known RBP eCLIP	18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	GPR162	Q16538	588 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	MCM10	Q7L590	875 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	TTC5	Q8N0Z6	440 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	PLEKHF1	Q96S99	279 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	ZBTB1	Q9Y2K1	713 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	NRXN2	Q9P2S2	1712 aa		18.35	■□□□□ 0.53
CDHR2-204	ENST00000508085	C10orf71	Q711Q0	1435 aa		18.34	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms