RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
NEDD4-207ENST00000508075 HMOX1P09601 288 aa19.64■□□□□ 0.73
NEDD4-207ENST00000508075 ATP6V1AP38606 617 aa19.64■□□□□ 0.73
NEDD4-207ENST00000508075 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.73
NEDD4-207ENST00000508075 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.73
NEDD4-207ENST00000508075 VIRMAQ69YN4 1812 aaKnown RBP19.63■□□□□ 0.73
NEDD4-207ENST00000508075 SLC4A9Q96Q91 983 aa19.63■□□□□ 0.73
NEDD4-207ENST00000508075 WWC3Q9ULE0 1092 aa19.63■□□□□ 0.73
NEDD4-207ENST00000508075 CHD4Q14839 1912 aa19.61■□□□□ 0.73
NEDD4-207ENST00000508075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.61■□□□□ 0.73
NEDD4-207ENST00000508075 GPR162Q16538 588 aa19.61■□□□□ 0.73
NEDD4-207ENST00000508075 GNPATO15228 680 aa19.6■□□□□ 0.73
NEDD4-207ENST00000508075 CABP4P57796 275 aa19.6■□□□□ 0.73
NEDD4-207ENST00000508075 SCN11AQ9UI33 1791 aa19.6■□□□□ 0.73
NEDD4-207ENST00000508075 MAP3K5Q99683 1374 aa19.58■□□□□ 0.73
NEDD4-207ENST00000508075 MYH14Q7Z406 1995 aaKnown RBP19.58■□□□□ 0.73
NEDD4-207ENST00000508075 PTCD1O75127 700 aaKnown RBP19.58■□□□□ 0.72
NEDD4-207ENST00000508075 C1orf141Q5JVX7 400 aa19.58■□□□□ 0.72
NEDD4-207ENST00000508075 DCAF5Q96JK2 942 aa19.58■□□□□ 0.72
NEDD4-207ENST00000508075 KDRP35968 1356 aa19.57■□□□□ 0.72
NEDD4-207ENST00000508075 COL5A3P25940 1745 aaPredicted RBP19.57■□□□□ 0.72
NEDD4-207ENST00000508075 NFATC2IPQ8NCF5 419 aa19.57■□□□□ 0.72
NEDD4-207ENST00000508075 ERVV-2B6SEH9 535 aa19.56■□□□□ 0.72
NEDD4-207ENST00000508075 YBX3P16989 372 aaKnown RBP eCLIP19.56■□□□□ 0.72
NEDD4-207ENST00000508075 AMOTQ4VCS5 1084 aa19.56■□□□□ 0.72
NEDD4-207ENST00000508075 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
NEDD4-207ENST00000508075 HSP90AB1P08238 724 aaKnown RBP19.54■□□□□ 0.72
NEDD4-207ENST00000508075 FLAD1Q8NFF5 587 aa19.54■□□□□ 0.72
NEDD4-207ENST00000508075 TJP1Q07157 1748 aa19.54■□□□□ 0.72
NEDD4-207ENST00000508075 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
NEDD4-207ENST00000508075 DIAPH1O60610 1272 aaKnown RBP19.53■□□□□ 0.72
NEDD4-207ENST00000508075 SLC39A6Q13433 755 aa19.52■□□□□ 0.72
NEDD4-207ENST00000508075 MTHFSDQ2M296 383 aaKnown RBP19.52■□□□□ 0.72
NEDD4-207ENST00000508075 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
NEDD4-207ENST00000508075 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
NEDD4-207ENST00000508075 SSFA2P28290 1259 aa19.51■□□□□ 0.71
NEDD4-207ENST00000508075 ZNF784Q8NCA9 323 aaPredicted RBP19.51■□□□□ 0.71
NEDD4-207ENST00000508075 AKAP4Q5JQC9 854 aa19.49■□□□□ 0.71
NEDD4-207ENST00000508075 ARHGEF1Q92888 912 aaKnown RBP19.49■□□□□ 0.71
NEDD4-207ENST00000508075 RTCBQ9Y3I0 505 aaKnown RBP19.49■□□□□ 0.71
NEDD4-207ENST00000508075 N4BP2Q86UW6 1770 aaPredicted RBP19.48■□□□□ 0.71
NEDD4-207ENST00000508075 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
NEDD4-207ENST00000508075 SRP68Q9UHB9 627 aaKnown RBP19.48■□□□□ 0.71
NEDD4-207ENST00000508075 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
NEDD4-207ENST00000508075 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
NEDD4-207ENST00000508075 MMP10P09238 476 aa19.47■□□□□ 0.71
NEDD4-207ENST00000508075 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
NEDD4-207ENST00000508075 DNAJC10Q8IXB1 793 aa19.47■□□□□ 0.71
NEDD4-207ENST00000508075 CRKLP46109 303 aaKnown RBP19.46■□□□□ 0.71
NEDD4-207ENST00000508075 SLC52A2Q9HAB3 445 aa19.46■□□□□ 0.71
NEDD4-207ENST00000508075 CICQ96RK0 1608 aaPredicted RBP19.46■□□□□ 0.71
NEDD4-207ENST00000508075 CNTNAP4Q9C0A0 1308 aa19.45■□□□□ 0.7
NEDD4-207ENST00000508075 RPS6KA4O75676 772 aa19.44■□□□□ 0.7
NEDD4-207ENST00000508075 CD2APQ9Y5K6 639 aa19.44■□□□□ 0.7
NEDD4-207ENST00000508075 UTRNP46939 3433 aa19.44■□□□□ 0.7
NEDD4-207ENST00000508075 GYS1P13807 737 aa19.43■□□□□ 0.7
NEDD4-207ENST00000508075 NPC1L1Q9UHC9 1359 aa19.43■□□□□ 0.7
NEDD4-207ENST00000508075 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
NEDD4-207ENST00000508075 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
NEDD4-207ENST00000508075 MRC1P22897 1456 aa19.42■□□□□ 0.7
NEDD4-207ENST00000508075 KCPQ6ZWJ8 1503 aa19.42■□□□□ 0.7
NEDD4-207ENST00000508075 RFC4P35249 363 aa19.42■□□□□ 0.7
NEDD4-207ENST00000508075 RC3H1Q5TC82 1133 aaKnown RBP19.42■□□□□ 0.7
NEDD4-207ENST00000508075 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
NEDD4-207ENST00000508075 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
NEDD4-207ENST00000508075 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
NEDD4-207ENST00000508075 PPP2R1AP30153 589 aa19.4■□□□□ 0.7
NEDD4-207ENST00000508075 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.7
NEDD4-207ENST00000508075 A0A0G2JLW4 131 aa19.39■□□□□ 0.69
NEDD4-207ENST00000508075 PRKAR2BP31323 418 aa19.39■□□□□ 0.69
NEDD4-207ENST00000508075 FKBP8Q14318 412 aa19.39■□□□□ 0.69
NEDD4-207ENST00000508075 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
NEDD4-207ENST00000508075 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.69
NEDD4-207ENST00000508075 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
NEDD4-207ENST00000508075 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
NEDD4-207ENST00000508075 CCDC87Q9NVE4 849 aa19.37■□□□□ 0.69
NEDD4-207ENST00000508075 ZBTB1Q9Y2K1 713 aa19.37■□□□□ 0.69
NEDD4-207ENST00000508075 KCNQ3O43525 872 aa19.36■□□□□ 0.69
NEDD4-207ENST00000508075 GRIN3BO60391 1043 aa19.36■□□□□ 0.69
NEDD4-207ENST00000508075 CYP19A1P11511 503 aaPredicted RBP19.36■□□□□ 0.69
NEDD4-207ENST00000508075 DDR1Q08345 913 aa19.36■□□□□ 0.69
NEDD4-207ENST00000508075 NLGN1Q8N2Q7 840 aa19.36■□□□□ 0.69
NEDD4-207ENST00000508075 ZNF526Q8TF50 670 aaPredicted RBP19.36■□□□□ 0.69
NEDD4-207ENST00000508075 RSPH6AQ9H0K4 717 aa19.36■□□□□ 0.69
NEDD4-207ENST00000508075 GOLGB1Q14789 3259 aaKnown RBP19.36■□□□□ 0.69
NEDD4-207ENST00000508075 USP42Q9H9J4 1324 aaKnown RBP19.35■□□□□ 0.69
NEDD4-207ENST00000508075 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
NEDD4-207ENST00000508075 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
NEDD4-207ENST00000508075 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
NEDD4-207ENST00000508075 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
NEDD4-207ENST00000508075 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
NEDD4-207ENST00000508075 CFAP53Q96M91 514 aa19.35■□□□□ 0.69
NEDD4-207ENST00000508075 PARP3Q9Y6F1 533 aa19.35■□□□□ 0.69
NEDD4-207ENST00000508075 DPEP1P16444 411 aa19.34■□□□□ 0.69
NEDD4-207ENST00000508075 C10orf71Q711Q0 1435 aa19.34■□□□□ 0.69
NEDD4-207ENST00000508075 SOS1Q07889 1333 aaPredicted RBP19.33■□□□□ 0.69
NEDD4-207ENST00000508075 AFDNP55196 1824 aaKnown RBP19.33■□□□□ 0.69
NEDD4-207ENST00000508075 TEFQ10587 303 aa19.33■□□□□ 0.68
NEDD4-207ENST00000508075 DCTN1Q14203 1278 aa19.33■□□□□ 0.68
NEDD4-207ENST00000508075 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms