RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 SMARCC1Q92922 1105 aaPredicted RBP21.96■■□□□ 1.11
HOXC4-203ENST00000507650 SLC4A9Q96Q91 983 aa21.96■■□□□ 1.11
HOXC4-203ENST00000507650 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
HOXC4-203ENST00000507650 ZNF530Q6P9A1 599 aaPredicted RBP21.95■■□□□ 1.1
HOXC4-203ENST00000507650 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
HOXC4-203ENST00000507650 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
HOXC4-203ENST00000507650 MSL1Q68DK7 614 aa21.93■■□□□ 1.1
HOXC4-203ENST00000507650 DCAF5Q96JK2 942 aa21.92■■□□□ 1.1
HOXC4-203ENST00000507650 MRC1P22897 1456 aa21.91■■□□□ 1.1
HOXC4-203ENST00000507650 ERVV-2B6SEH9 535 aa21.91■■□□□ 1.1
HOXC4-203ENST00000507650 AMOTQ4VCS5 1084 aa21.9■■□□□ 1.1
HOXC4-203ENST00000507650 NLGN2Q8NFZ4 835 aa21.9■■□□□ 1.1
HOXC4-203ENST00000507650 MSH5O43196 834 aa21.89■■□□□ 1.09
HOXC4-203ENST00000507650 HMOX1P09601 288 aa21.89■■□□□ 1.09
HOXC4-203ENST00000507650 CNGB1Q14028 1251 aaPredicted RBP21.89■■□□□ 1.09
HOXC4-203ENST00000507650 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.09
HOXC4-203ENST00000507650 AK7Q96M32 723 aa21.88■■□□□ 1.09
HOXC4-203ENST00000507650 UBR2Q8IWV8 1755 aa21.87■■□□□ 1.09
HOXC4-203ENST00000507650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.87■■□□□ 1.09
HOXC4-203ENST00000507650 PHF14O94880 888 aa21.87■■□□□ 1.09
HOXC4-203ENST00000507650 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
HOXC4-203ENST00000507650 POLD1P28340 1107 aa21.87■■□□□ 1.09
HOXC4-203ENST00000507650 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
HOXC4-203ENST00000507650 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
HOXC4-203ENST00000507650 YY1P25490 414 aa21.86■■□□□ 1.09
HOXC4-203ENST00000507650 KIF13BQ9NQT8 1826 aa21.85■■□□□ 1.09
HOXC4-203ENST00000507650 DIAPH1O60610 1272 aaKnown RBP21.84■■□□□ 1.09
HOXC4-203ENST00000507650 C1orf141Q5JVX7 400 aa21.84■■□□□ 1.09
HOXC4-203ENST00000507650 KLHL34Q8N239 644 aa21.84■■□□□ 1.09
HOXC4-203ENST00000507650 NFATC2IPQ8NCF5 419 aa21.84■■□□□ 1.09
HOXC4-203ENST00000507650 LGR6Q9HBX8 967 aa21.84■■□□□ 1.09
HOXC4-203ENST00000507650 GNPATO15228 680 aa21.83■■□□□ 1.09
HOXC4-203ENST00000507650 SSFA2P28290 1259 aa21.83■■□□□ 1.09
HOXC4-203ENST00000507650 CABP4P57796 275 aa21.83■■□□□ 1.09
HOXC4-203ENST00000507650 FLAD1Q8NFF5 587 aa21.83■■□□□ 1.09
HOXC4-203ENST00000507650 KCPQ6ZWJ8 1503 aa21.83■■□□□ 1.09
HOXC4-203ENST00000507650 MTHFSDQ2M296 383 aaKnown RBP21.82■■□□□ 1.08
HOXC4-203ENST00000507650 AKAP4Q5JQC9 854 aa21.82■■□□□ 1.08
HOXC4-203ENST00000507650 RBM42Q9BTD8 480 aaKnown RBP21.82■■□□□ 1.08
HOXC4-203ENST00000507650 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
HOXC4-203ENST00000507650 DCAF8L1A6NGE4 600 aa21.78■■□□□ 1.08
HOXC4-203ENST00000507650 RNMTO43148 476 aaKnown RBP21.78■■□□□ 1.08
HOXC4-203ENST00000507650 PTCD1O75127 700 aaKnown RBP21.78■■□□□ 1.08
HOXC4-203ENST00000507650 N4BP2Q86UW6 1770 aaPredicted RBP21.78■■□□□ 1.08
HOXC4-203ENST00000507650 YBX3P16989 372 aaKnown RBP eCLIP21.77■■□□□ 1.08
HOXC4-203ENST00000507650 SLC52A2Q9HAB3 445 aa21.77■■□□□ 1.08
HOXC4-203ENST00000507650 HMGB2P26583 209 aaKnown RBP21.76■■□□□ 1.07
HOXC4-203ENST00000507650 BRCA1P38398 1863 aaKnown RBP21.76■■□□□ 1.07
HOXC4-203ENST00000507650 RC3H1Q5TC82 1133 aaKnown RBP21.76■■□□□ 1.07
HOXC4-203ENST00000507650 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
HOXC4-203ENST00000507650 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
HOXC4-203ENST00000507650 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
HOXC4-203ENST00000507650 U2SURPO15042 1029 aaKnown RBP21.73■■□□□ 1.07
HOXC4-203ENST00000507650 GPR162Q16538 588 aa21.73■■□□□ 1.07
HOXC4-203ENST00000507650 ARHGEF1Q92888 912 aaKnown RBP21.73■■□□□ 1.07
HOXC4-203ENST00000507650 RPS6KA4O75676 772 aa21.72■■□□□ 1.07
HOXC4-203ENST00000507650 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
HOXC4-203ENST00000507650 RSPH6AQ9H0K4 717 aa21.72■■□□□ 1.07
HOXC4-203ENST00000507650 RTCBQ9Y3I0 505 aaKnown RBP21.72■■□□□ 1.07
HOXC4-203ENST00000507650 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
HOXC4-203ENST00000507650 INTS5Q6P9B9 1019 aaKnown RBP21.71■■□□□ 1.07
HOXC4-203ENST00000507650 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
HOXC4-203ENST00000507650 GYS1P13807 737 aa21.7■■□□□ 1.06
HOXC4-203ENST00000507650 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
HOXC4-203ENST00000507650 DNAJC10Q8IXB1 793 aa21.7■■□□□ 1.06
HOXC4-203ENST00000507650 PELP1Q8IZL8 1130 aaKnown RBP21.7■■□□□ 1.06
HOXC4-203ENST00000507650 IL17REQ8NFR9 667 aa21.7■■□□□ 1.06
HOXC4-203ENST00000507650 AFDNP55196 1824 aaKnown RBP21.69■■□□□ 1.06
HOXC4-203ENST00000507650 MMP10P09238 476 aa21.69■■□□□ 1.06
HOXC4-203ENST00000507650 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
HOXC4-203ENST00000507650 ADRA2BP18089 450 aa21.68■■□□□ 1.06
HOXC4-203ENST00000507650 SRP68Q9UHB9 627 aaKnown RBP21.68■■□□□ 1.06
HOXC4-203ENST00000507650 C10orf71Q711Q0 1435 aa21.68■■□□□ 1.06
HOXC4-203ENST00000507650 PXDNLA1KZ92 1463 aa21.68■■□□□ 1.06
HOXC4-203ENST00000507650 CEMIPQ8WUJ3 1361 aa21.67■■□□□ 1.06
HOXC4-203ENST00000507650 PRKAR2BP31323 418 aa21.67■■□□□ 1.06
HOXC4-203ENST00000507650 CYP19A1P11511 503 aaPredicted RBP21.66■■□□□ 1.06
HOXC4-203ENST00000507650 USP42Q9H9J4 1324 aaKnown RBP21.65■■□□□ 1.06
HOXC4-203ENST00000507650 WWC3Q9ULE0 1092 aa21.65■■□□□ 1.06
HOXC4-203ENST00000507650 NRXN2Q9P2S2 1712 aa21.65■■□□□ 1.06
HOXC4-203ENST00000507650 SOS1Q07889 1333 aaPredicted RBP21.64■■□□□ 1.05
HOXC4-203ENST00000507650 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 GNAT3A8MTJ3 354 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 RFC4P35249 363 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 FKBP8Q14318 412 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 CCDC87Q9NVE4 849 aa21.63■■□□□ 1.05
HOXC4-203ENST00000507650 DDR1Q08345 913 aa21.62■■□□□ 1.05
HOXC4-203ENST00000507650 ZBTB1Q9Y2K1 713 aa21.62■■□□□ 1.05
HOXC4-203ENST00000507650 ARFGEF1Q9Y6D6 1849 aa21.62■■□□□ 1.05
HOXC4-203ENST00000507650 NLGN1Q8N2Q7 840 aa21.61■■□□□ 1.05
HOXC4-203ENST00000507650 KCNQ3O43525 872 aa21.6■■□□□ 1.05
HOXC4-203ENST00000507650 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
HOXC4-203ENST00000507650 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
HOXC4-203ENST00000507650 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
HOXC4-203ENST00000507650 BCORQ6W2J9 1755 aa21.59■■□□□ 1.05
HOXC4-203ENST00000507650 KDM3BQ7LBC6 1761 aa21.59■■□□□ 1.05
HOXC4-203ENST00000507650 VSIG10Q8N0Z9 540 aa21.59■■□□□ 1.05
HOXC4-203ENST00000507650 COL15A1P39059 1388 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms