RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 WWC1Q8IX03 1113 aa26.2■■□□□ 1.78
USP53-203ENST00000507597 DOT1LQ8TEK3 1739 aa26.19■■□□□ 1.78
USP53-203ENST00000507597 NHSQ6T4R5 1651 aa26.19■■□□□ 1.78
USP53-203ENST00000507597 ADAMTS7Q9UKP4 1686 aa26.19■■□□□ 1.78
USP53-203ENST00000507597 DLG5Q8TDM6 1919 aa26.18■■□□□ 1.78
USP53-203ENST00000507597 PLSCR1O15162 318 aa26.18■■□□□ 1.78
USP53-203ENST00000507597 HNRNPUQ00839 825 aaKnown RBP eCLIP26.18■■□□□ 1.78
USP53-203ENST00000507597 MRC1P22897 1456 aa26.17■■□□□ 1.78
USP53-203ENST00000507597 GNAI1P63096 354 aa26.17■■□□□ 1.78
USP53-203ENST00000507597 IL16Q14005 1332 aa26.16■■□□□ 1.78
USP53-203ENST00000507597 SBF2Q86WG5 1849 aa26.16■■□□□ 1.78
USP53-203ENST00000507597 UPF1Q92900 1129 aaKnown RBP eCLIP26.15■■□□□ 1.78
USP53-203ENST00000507597 CFAP44Q96MT7 982 aa26.15■■□□□ 1.78
USP53-203ENST00000507597 THUMPD2Q9BTF0 503 aaKnown RBP26.15■■□□□ 1.78
USP53-203ENST00000507597 IFT57Q9NWB7 429 aa26.15■■□□□ 1.78
USP53-203ENST00000507597 TSPYL4Q9UJ04 414 aa26.14■■□□□ 1.78
USP53-203ENST00000507597 LAS1LQ9Y4W2 734 aaKnown RBP26.14■■□□□ 1.78
USP53-203ENST00000507597 ZNF790Q6PG37 636 aa26.13■■□□□ 1.77
USP53-203ENST00000507597 ATG3Q9NT62 314 aa26.13■■□□□ 1.77
USP53-203ENST00000507597 TOGARAM1Q9Y4F4 1720 aa26.13■■□□□ 1.77
USP53-203ENST00000507597 ITGB4P16144 1822 aa26.11■■□□□ 1.77
USP53-203ENST00000507597 ASAP1Q9ULH1 1129 aa26.11■■□□□ 1.77
USP53-203ENST00000507597 PALLDQ8WX93 1383 aa26.1■■□□□ 1.77
USP53-203ENST00000507597 SENP3-EIF4A1A0A087X0R7 540 aa26.1■■□□□ 1.77
USP53-203ENST00000507597 GOLGA2Q08379 1002 aa26.1■■□□□ 1.77
USP53-203ENST00000507597 SLC27A3Q5K4L6 730 aa26.1■■□□□ 1.77
USP53-203ENST00000507597 FMNL2Q96PY5 1086 aa26.1■■□□□ 1.77
USP53-203ENST00000507597 MYH16Q9H6N6 1097 aa26.1■■□□□ 1.77
USP53-203ENST00000507597 CHL1O00533 1208 aa26.09■■□□□ 1.77
USP53-203ENST00000507597 PTF1AQ7RTS3 328 aa26.09■■□□□ 1.77
USP53-203ENST00000507597 RBM42Q9BTD8 480 aaKnown RBP26.09■■□□□ 1.77
USP53-203ENST00000507597 VIRMAQ69YN4 1812 aaKnown RBP26.09■■□□□ 1.77
USP53-203ENST00000507597 SLC39A6Q13433 755 aa26.08■■□□□ 1.77
USP53-203ENST00000507597 TEX13AQ9BXU3 409 aaPredicted RBP26.08■■□□□ 1.77
USP53-203ENST00000507597 BTAF1O14981 1849 aa26.07■■□□□ 1.76
USP53-203ENST00000507597 VSIG10Q8N0Z9 540 aa26.07■■□□□ 1.76
USP53-203ENST00000507597 CHMP4AQ9BY43 222 aa26.07■■□□□ 1.76
USP53-203ENST00000507597 LOC102724428A0A0B4J2F2 783 aa26.06■■□□□ 1.76
USP53-203ENST00000507597 E9PSI1 815 aa26.06■■□□□ 1.76
USP53-203ENST00000507597 PTCD1O75127 700 aaKnown RBP26.06■■□□□ 1.76
USP53-203ENST00000507597 SIK1P57059 783 aa26.06■■□□□ 1.76
USP53-203ENST00000507597 ZNF853P0CG23 659 aa26.05■■□□□ 1.76
USP53-203ENST00000507597 MIS18AQ9NYP9 233 aa26.05■■□□□ 1.76
USP53-203ENST00000507597 CCNL1Q9UK58 526 aaPredicted RBP26.05■■□□□ 1.76
USP53-203ENST00000507597 ZBED9Q6R2W3 1325 aa26.05■■□□□ 1.76
USP53-203ENST00000507597 ZNF521Q96K83 1311 aa26.05■■□□□ 1.76
USP53-203ENST00000507597 ATP6V1AP38606 617 aa26.04■■□□□ 1.76
USP53-203ENST00000507597 EN1Q05925 392 aaPredicted RBP26.04■■□□□ 1.76
USP53-203ENST00000507597 TXNRD1Q16881 649 aa26.04■■□□□ 1.76
USP53-203ENST00000507597 SIPA1L3O60292 1781 aaPredicted RBP26.03■■□□□ 1.76
USP53-203ENST00000507597 CAMKK2Q96RR4 588 aa26.03■■□□□ 1.76
USP53-203ENST00000507597 TNS1Q9HBL0 1735 aaKnown RBP26.02■■□□□ 1.76
USP53-203ENST00000507597 SNRPA1P09661 255 aaKnown RBP26.02■■□□□ 1.76
USP53-203ENST00000507597 MBIPQ9NS73 344 aa26.02■■□□□ 1.76
USP53-203ENST00000507597 EIF4A1P60842 406 aaKnown RBP26.01■■□□□ 1.75
USP53-203ENST00000507597 ZNF496Q96IT1 587 aaPredicted RBP26.01■■□□□ 1.75
USP53-203ENST00000507597 HEG1Q9ULI3 1381 aa26■■□□□ 1.75
USP53-203ENST00000507597 STARD3NLO95772 234 aa26■■□□□ 1.75
USP53-203ENST00000507597 EZH2Q15910 746 aaKnown RBP26■■□□□ 1.75
USP53-203ENST00000507597 DEFB132Q7Z7B7 95 aa26■■□□□ 1.75
USP53-203ENST00000507597 EP400Q96L91 3159 aa26■■□□□ 1.75
USP53-203ENST00000507597 RGPD3A6NKT7 1758 aaPredicted RBP26■■□□□ 1.75
USP53-203ENST00000507597 RGPD4Q7Z3J3 1758 aa26■■□□□ 1.75
USP53-203ENST00000507597 SOS1Q07889 1333 aaPredicted RBP25.99■■□□□ 1.75
USP53-203ENST00000507597 KCNQ3O43525 872 aa25.98■■□□□ 1.75
USP53-203ENST00000507597 HOXB7P09629 217 aa25.97■■□□□ 1.75
USP53-203ENST00000507597 SLFN5Q08AF3 891 aa25.97■■□□□ 1.75
USP53-203ENST00000507597 NBPF14Q5TI25 921 aa25.97■■□□□ 1.75
USP53-203ENST00000507597 PAPPAQ13219 1627 aa25.96■■□□□ 1.75
USP53-203ENST00000507597 GIGYF1O75420 1035 aaPredicted RBP25.94■■□□□ 1.74
USP53-203ENST00000507597 PROM2Q8N271 834 aa25.94■■□□□ 1.74
USP53-203ENST00000507597 TSR2Q969E8 191 aaKnown RBP25.94■■□□□ 1.74
USP53-203ENST00000507597 LY75O60449 1722 aa25.94■■□□□ 1.74
USP53-203ENST00000507597 KCPQ6ZWJ8 1503 aa25.93■■□□□ 1.74
USP53-203ENST00000507597 FANCIQ9NVI1 1328 aa25.93■■□□□ 1.74
USP53-203ENST00000507597 KDM3BQ7LBC6 1761 aa25.93■■□□□ 1.74
USP53-203ENST00000507597 NPM2Q86SE8 214 aaKnown RBP25.93■■□□□ 1.74
USP53-203ENST00000507597 YTHDC1Q96MU7 727 aaKnown RBP25.93■■□□□ 1.74
USP53-203ENST00000507597 RC3H1Q5TC82 1133 aaKnown RBP25.92■■□□□ 1.74
USP53-203ENST00000507597 ZNF831Q5JPB2 1677 aa25.92■■□□□ 1.74
USP53-203ENST00000507597 DNAJC10Q8IXB1 793 aa25.91■■□□□ 1.74
USP53-203ENST00000507597 LRRC4BQ9NT99 713 aa25.91■■□□□ 1.74
USP53-203ENST00000507597 STK32BQ9NY57 414 aa25.91■■□□□ 1.74
USP53-203ENST00000507597 UBR2Q8IWV8 1755 aa25.9■■□□□ 1.74
USP53-203ENST00000507597 DUSP27Q5VZP5 1158 aa25.9■■□□□ 1.74
USP53-203ENST00000507597 AK7Q96M32 723 aa25.9■■□□□ 1.74
USP53-203ENST00000507597 SLC4A9Q96Q91 983 aa25.9■■□□□ 1.74
USP53-203ENST00000507597 ITPK1Q13572 414 aa25.89■■□□□ 1.74
USP53-203ENST00000507597 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
USP53-203ENST00000507597 CNTNAP4Q9C0A0 1308 aa25.88■■□□□ 1.73
USP53-203ENST00000507597 CT47B1P0C2W7 299 aaPredicted RBP25.88■■□□□ 1.73
USP53-203ENST00000507597 TWISTNBQ3B726 338 aaPredicted RBP25.88■■□□□ 1.73
USP53-203ENST00000507597 TRMT2AQ8IZ69 625 aaKnown RBP25.88■■□□□ 1.73
USP53-203ENST00000507597 ERBB4Q15303 1308 aa25.88■■□□□ 1.73
USP53-203ENST00000507597 CYP19A1P11511 503 aaPredicted RBP25.87■■□□□ 1.73
USP53-203ENST00000507597 EXOSC9Q06265 439 aaKnown RBP25.87■■□□□ 1.73
USP53-203ENST00000507597 FLAD1Q8NFF5 587 aa25.87■■□□□ 1.73
USP53-203ENST00000507597 CDCA7LQ96GN5 454 aa25.87■■□□□ 1.73
USP53-203ENST00000507597 CCDC87Q9NVE4 849 aa25.87■■□□□ 1.73
USP53-203ENST00000507597 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms