RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
SNHG4-204ENST00000507197 GOLGB1Q14789 3259 aaKnown RBP17.55■□□□□ 0.4
SNHG4-204ENST00000507197 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
SNHG4-204ENST00000507197 YBX3P16989 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNHG4-204ENST00000507197 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
SNHG4-204ENST00000507197 CABP4P57796 275 aa17.52■□□□□ 0.4
SNHG4-204ENST00000507197 C1QTNF8P60827 252 aa17.52■□□□□ 0.4
SNHG4-204ENST00000507197 ITPK1Q13572 414 aa17.52■□□□□ 0.4
SNHG4-204ENST00000507197 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
SNHG4-204ENST00000507197 AMIGO3Q86WK7 504 aa17.52■□□□□ 0.4
SNHG4-204ENST00000507197 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
SNHG4-204ENST00000507197 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
SNHG4-204ENST00000507197 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
SNHG4-204ENST00000507197 ADRA2BP18089 450 aa17.5■□□□□ 0.39
SNHG4-204ENST00000507197 MTHFSP49914 203 aa17.5■□□□□ 0.39
SNHG4-204ENST00000507197 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
SNHG4-204ENST00000507197 KDRP35968 1356 aa17.5■□□□□ 0.39
SNHG4-204ENST00000507197 UBR3Q6ZT12 1888 aa17.5■□□□□ 0.39
SNHG4-204ENST00000507197 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
SNHG4-204ENST00000507197 NLGN1Q8N2Q7 840 aa17.49■□□□□ 0.39
SNHG4-204ENST00000507197 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
SNHG4-204ENST00000507197 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
SNHG4-204ENST00000507197 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
SNHG4-204ENST00000507197 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
SNHG4-204ENST00000507197 MMP10P09238 476 aa17.46■□□□□ 0.39
SNHG4-204ENST00000507197 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
SNHG4-204ENST00000507197 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
SNHG4-204ENST00000507197 ZNF831Q5JPB2 1677 aa17.45■□□□□ 0.38
SNHG4-204ENST00000507197 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
SNHG4-204ENST00000507197 IL13P35225 146 aa17.45■□□□□ 0.38
SNHG4-204ENST00000507197 RFC4P35249 363 aa17.45■□□□□ 0.38
SNHG4-204ENST00000507197 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
SNHG4-204ENST00000507197 SLC4A9Q96Q91 983 aa17.44■□□□□ 0.38
SNHG4-204ENST00000507197 TGFB2P61812 414 aa17.43■□□□□ 0.38
SNHG4-204ENST00000507197 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
SNHG4-204ENST00000507197 NFATC2IPQ8NCF5 419 aa17.43■□□□□ 0.38
SNHG4-204ENST00000507197 ARHGEF1Q92888 912 aaKnown RBP17.43■□□□□ 0.38
SNHG4-204ENST00000507197 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
SNHG4-204ENST00000507197 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
SNHG4-204ENST00000507197 PTCD1O75127 700 aaKnown RBP17.42■□□□□ 0.38
SNHG4-204ENST00000507197 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
SNHG4-204ENST00000507197 CCDC87Q9NVE4 849 aa17.42■□□□□ 0.38
SNHG4-204ENST00000507197 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
SNHG4-204ENST00000507197 GYS1P13807 737 aa17.39■□□□□ 0.37
SNHG4-204ENST00000507197 CRKLP46109 303 aaKnown RBP17.39■□□□□ 0.37
SNHG4-204ENST00000507197 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
SNHG4-204ENST00000507197 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
SNHG4-204ENST00000507197 WWC3Q9ULE0 1092 aa17.38■□□□□ 0.37
SNHG4-204ENST00000507197 ADCY9O60503 1353 aa17.38■□□□□ 0.37
SNHG4-204ENST00000507197 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
SNHG4-204ENST00000507197 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
SNHG4-204ENST00000507197 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
SNHG4-204ENST00000507197 C10orf71Q711Q0 1435 aa17.37■□□□□ 0.37
SNHG4-204ENST00000507197 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
SNHG4-204ENST00000507197 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
SNHG4-204ENST00000507197 HMOX1P09601 288 aa17.35■□□□□ 0.37
SNHG4-204ENST00000507197 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
SNHG4-204ENST00000507197 USP42Q9H9J4 1324 aaKnown RBP17.35■□□□□ 0.37
SNHG4-204ENST00000507197 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
SNHG4-204ENST00000507197 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
SNHG4-204ENST00000507197 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
SNHG4-204ENST00000507197 C4AP0C0L4 1744 aa17.33■□□□□ 0.37
SNHG4-204ENST00000507197 ZPR1O75312 459 aa17.33■□□□□ 0.36
SNHG4-204ENST00000507197 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.36
SNHG4-204ENST00000507197 LGR6Q9HBX8 967 aa17.33■□□□□ 0.36
SNHG4-204ENST00000507197 FCHSD2O94868 740 aa17.32■□□□□ 0.36
SNHG4-204ENST00000507197 DPEP1P16444 411 aa17.32■□□□□ 0.36
SNHG4-204ENST00000507197 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
SNHG4-204ENST00000507197 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
SNHG4-204ENST00000507197 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
SNHG4-204ENST00000507197 KIF13BQ9NQT8 1826 aa17.32■□□□□ 0.36
SNHG4-204ENST00000507197 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
SNHG4-204ENST00000507197 MRC1P22897 1456 aa17.31■□□□□ 0.36
SNHG4-204ENST00000507197 FKBP8Q14318 412 aa17.31■□□□□ 0.36
SNHG4-204ENST00000507197 DNAJC10Q8IXB1 793 aa17.31■□□□□ 0.36
SNHG4-204ENST00000507197 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
SNHG4-204ENST00000507197 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
SNHG4-204ENST00000507197 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
SNHG4-204ENST00000507197 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
SNHG4-204ENST00000507197 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
SNHG4-204ENST00000507197 CYP19A1P11511 503 aaPredicted RBP17.29■□□□□ 0.36
SNHG4-204ENST00000507197 SLC39A6Q13433 755 aa17.29■□□□□ 0.36
SNHG4-204ENST00000507197 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
SNHG4-204ENST00000507197 MYH14Q7Z406 1995 aaKnown RBP17.29■□□□□ 0.36
SNHG4-204ENST00000507197 TJP1Q07157 1748 aa17.29■□□□□ 0.36
SNHG4-204ENST00000507197 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
SNHG4-204ENST00000507197 DALRD3Q5D0E6 543 aaKnown RBP17.28■□□□□ 0.36
SNHG4-204ENST00000507197 STARD3NLO95772 234 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 TM4SF1P30408 202 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 DDR1Q08345 913 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 TEFQ10587 303 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 CFAP53Q96M91 514 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
SNHG4-204ENST00000507197 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
SNHG4-204ENST00000507197 POLRMTO00411 1230 aaKnown RBP17.26■□□□□ 0.35
SNHG4-204ENST00000507197 KCNA3P22001 575 aa17.26■□□□□ 0.35
SNHG4-204ENST00000507197 KIAA1551Q9HCM1 1747 aa17.26■□□□□ 0.35
SNHG4-204ENST00000507197 COL15A1P39059 1388 aa17.26■□□□□ 0.35
SNHG4-204ENST00000507197 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms