RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 HSPA8P11142 646 aaKnown RBP10.41□□□□□ -0.74
VCAN-207ENST00000507162 CHRNA5P30532 468 aa10.41□□□□□ -0.74
VCAN-207ENST00000507162 SIK1P57059 783 aa10.41□□□□□ -0.74
VCAN-207ENST00000507162 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
VCAN-207ENST00000507162 RAPGEF4Q8WZA2 1011 aa10.41□□□□□ -0.74
VCAN-207ENST00000507162 SPINK5Q9NQ38 1064 aaPredicted RBP10.41□□□□□ -0.74
VCAN-207ENST00000507162 CNTNAP1P78357 1384 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 POTECB2RU33 542 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 ATP6V1AP38606 617 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 AMPHP49418 695 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 CHADLQ6NUI6 762 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 PIGBQ92521 554 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 C5P01031 1676 aa10.4□□□□□ -0.74
VCAN-207ENST00000507162 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
VCAN-207ENST00000507162 LMNB1P20700 586 aa10.39□□□□□ -0.75
VCAN-207ENST00000507162 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
VCAN-207ENST00000507162 RTCBQ9Y3I0 505 aaKnown RBP10.39□□□□□ -0.75
VCAN-207ENST00000507162 USP31Q70CQ4 1352 aa10.39□□□□□ -0.75
VCAN-207ENST00000507162 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 FBLN1P23142 703 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 RFC4P35249 363 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 ITPK1Q13572 414 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 ARHGEF1Q92888 912 aaKnown RBP10.38□□□□□ -0.75
VCAN-207ENST00000507162 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 QRICH2Q9H0J4 1663 aa10.38□□□□□ -0.75
VCAN-207ENST00000507162 ZC3H4Q9UPT8 1303 aaKnown RBP10.37□□□□□ -0.75
VCAN-207ENST00000507162 HOXC9P31274 260 aa10.37□□□□□ -0.75
VCAN-207ENST00000507162 TMC1Q8TDI8 760 aa10.37□□□□□ -0.75
VCAN-207ENST00000507162 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
VCAN-207ENST00000507162 TAF1LQ8IZX4 1826 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 TMEM88BA6NKF7 163 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 GYS1P13807 737 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
VCAN-207ENST00000507162 ASAP1Q9ULH1 1129 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 MEGF6O75095 1541 aa10.36□□□□□ -0.75
VCAN-207ENST00000507162 TNRC18O15417 2968 aaPredicted RBP10.36□□□□□ -0.75
VCAN-207ENST00000507162 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 PCDH11XQ9BZA7 1347 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 PCDH11YQ9BZA8 1340 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 DEFB115Q30KQ5 88 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 HDGFL2Q7Z4V5 671 aaPredicted RBP10.35□□□□□ -0.75
VCAN-207ENST00000507162 UBR3Q6ZT12 1888 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 PKD1L3Q7Z443 1732 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 KIAA1210Q9ULL0 1709 aa10.35□□□□□ -0.75
VCAN-207ENST00000507162 CYP27B1O15528 508 aa10.34□□□□□ -0.75
VCAN-207ENST00000507162 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
VCAN-207ENST00000507162 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
VCAN-207ENST00000507162 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 KIAA1551Q9HCM1 1747 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 TOGARAM1Q9Y4F4 1720 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
VCAN-207ENST00000507162 TMOD3Q9NYL9 352 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 LTN1O94822 1766 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 SBF1O95248 1867 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 KIF13BQ9NQT8 1826 aa10.33□□□□□ -0.76
VCAN-207ENST00000507162 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
VCAN-207ENST00000507162 DDNO94850 711 aaPredicted RBP10.32□□□□□ -0.76
VCAN-207ENST00000507162 GRM1Q13255 1194 aa10.32□□□□□ -0.76
VCAN-207ENST00000507162 SLC12A5Q9H2X9 1139 aa10.32□□□□□ -0.76
VCAN-207ENST00000507162 TSKSQ9UJT2 592 aa10.32□□□□□ -0.76
VCAN-207ENST00000507162 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
VCAN-207ENST00000507162 ARFGEF1Q9Y6D6 1849 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 SBNO2Q9Y2G9 1366 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 RPS6KA4O75676 772 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 FKBP8Q14318 412 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 ERFEQ4G0M1 354 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
VCAN-207ENST00000507162 COG3Q96JB2 828 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 MCOLN1Q9GZU1 580 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 ATG3Q9NT62 314 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 SRP68Q9UHB9 627 aaKnown RBP10.31□□□□□ -0.76
VCAN-207ENST00000507162 PASKQ96RG2 1323 aa10.31□□□□□ -0.76
VCAN-207ENST00000507162 DDR1Q08345 913 aa10.3□□□□□ -0.76
VCAN-207ENST00000507162 RRS1Q15050 365 aaKnown RBP10.3□□□□□ -0.76
VCAN-207ENST00000507162 EAPPQ56P03 285 aaPredicted RBP10.3□□□□□ -0.76
VCAN-207ENST00000507162 LDHDQ86WU2 507 aa10.3□□□□□ -0.76
VCAN-207ENST00000507162 TTLL6Q8N841 843 aa10.3□□□□□ -0.76
VCAN-207ENST00000507162 ZNF219Q9P2Y4 722 aaPredicted RBP10.3□□□□□ -0.76
VCAN-207ENST00000507162 ABT1Q9ULW3 272 aaKnown RBP10.3□□□□□ -0.76
VCAN-207ENST00000507162 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
VCAN-207ENST00000507162 CD163L1Q9NR16 1453 aa10.29□□□□□ -0.76
VCAN-207ENST00000507162 BRCA1P38398 1863 aaKnown RBP10.28□□□□□ -0.76
VCAN-207ENST00000507162 KDM6AO15550 1401 aaPredicted RBP10.28□□□□□ -0.76
VCAN-207ENST00000507162 RASSF10A6NK89 507 aa10.28□□□□□ -0.76
VCAN-207ENST00000507162 NFKBIEO00221 500 aa10.28□□□□□ -0.76
VCAN-207ENST00000507162 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
VCAN-207ENST00000507162 DGKZQ13574 1117 aa10.28□□□□□ -0.76
VCAN-207ENST00000507162 TERF2IPQ9NYB0 399 aa10.28□□□□□ -0.76
VCAN-207ENST00000507162 C4AP0C0L4 1744 aa10.27□□□□□ -0.76
VCAN-207ENST00000507162 RGPD2P0DJD1 1756 aa10.27□□□□□ -0.77
VCAN-207ENST00000507162 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
VCAN-207ENST00000507162 PRPF38BQ5VTL8 546 aaKnown RBP10.27□□□□□ -0.77
VCAN-207ENST00000507162 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
VCAN-207ENST00000507162 SLC4A9Q96Q91 983 aa10.27□□□□□ -0.77
VCAN-207ENST00000507162 SPG7Q9UQ90 795 aa10.27□□□□□ -0.77
VCAN-207ENST00000507162 IQCA1LA6NCM1 817 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms