RNA–Protein interactions for RNA: ENST00000507012.1

RERE-217, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-217ENST00000507012 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
RERE-217ENST00000507012 SCN11AQ9UI33 1791 aa14.67□□□□□ -0.06
RERE-217ENST00000507012 C4BP0C0L5 1744 aa14.66□□□□□ -0.06
RERE-217ENST00000507012 MRC1P22897 1456 aa14.66□□□□□ -0.06
RERE-217ENST00000507012 FCHSD2O94868 740 aa14.66□□□□□ -0.06
RERE-217ENST00000507012 POLD1P28340 1107 aa14.66□□□□□ -0.06
RERE-217ENST00000507012 MTHFSDQ2M296 383 aaKnown RBP14.66□□□□□ -0.06
RERE-217ENST00000507012 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
RERE-217ENST00000507012 SLC52A2Q9HAB3 445 aa14.66□□□□□ -0.06
RERE-217ENST00000507012 RNMTO43148 476 aaKnown RBP14.65□□□□□ -0.06
RERE-217ENST00000507012 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
RERE-217ENST00000507012 SSFA2P28290 1259 aa14.65□□□□□ -0.06
RERE-217ENST00000507012 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
RERE-217ENST00000507012 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
RERE-217ENST00000507012 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
RERE-217ENST00000507012 TUBGCP6Q96RT7 1819 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 GNAT3A8MTJ3 354 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 NEFMP07197 916 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 PRKAR2BP31323 418 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 DDX10Q13206 875 aaKnown RBP14.64□□□□□ -0.07
RERE-217ENST00000507012 RC3H1Q5TC82 1133 aaKnown RBP14.64□□□□□ -0.07
RERE-217ENST00000507012 ADAMTS7Q9UKP4 1686 aa14.64□□□□□ -0.07
RERE-217ENST00000507012 MSH5O43196 834 aa14.63□□□□□ -0.07
RERE-217ENST00000507012 COL23A1Q86Y22 540 aaPredicted RBP14.63□□□□□ -0.07
RERE-217ENST00000507012 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
RERE-217ENST00000507012 ARXQ96QS3 562 aa14.63□□□□□ -0.07
RERE-217ENST00000507012 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
RERE-217ENST00000507012 PNNQ9H307 717 aaKnown RBP14.63□□□□□ -0.07
RERE-217ENST00000507012 ADRA2BP18089 450 aa14.62□□□□□ -0.07
RERE-217ENST00000507012 ITPK1Q13572 414 aa14.62□□□□□ -0.07
RERE-217ENST00000507012 COL24A1Q17RW2 1714 aa14.62□□□□□ -0.07
RERE-217ENST00000507012 CNTNAP4Q9C0A0 1308 aa14.62□□□□□ -0.07
RERE-217ENST00000507012 TEFQ10587 303 aa14.61□□□□□ -0.07
RERE-217ENST00000507012 LGR6Q9HBX8 967 aa14.61□□□□□ -0.07
RERE-217ENST00000507012 CICQ96RK0 1608 aaPredicted RBP14.61□□□□□ -0.07
RERE-217ENST00000507012 UBR3Q6ZT12 1888 aa14.61□□□□□ -0.07
RERE-217ENST00000507012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.6□□□□□ -0.07
RERE-217ENST00000507012 GNPATO15228 680 aa14.6□□□□□ -0.07
RERE-217ENST00000507012 HTATSF1O43719 755 aaKnown RBP14.6□□□□□ -0.07
RERE-217ENST00000507012 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
RERE-217ENST00000507012 PTCD1O75127 700 aaKnown RBP14.59□□□□□ -0.07
RERE-217ENST00000507012 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
RERE-217ENST00000507012 PHACTR3Q96KR7 559 aa14.59□□□□□ -0.07
RERE-217ENST00000507012 SLC4A9Q96Q91 983 aa14.59□□□□□ -0.07
RERE-217ENST00000507012 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
RERE-217ENST00000507012 CEMIPQ8WUJ3 1361 aa14.59□□□□□ -0.07
RERE-217ENST00000507012 VIRMAQ69YN4 1812 aaKnown RBP14.58□□□□□ -0.08
RERE-217ENST00000507012 TTC5Q8N0Z6 440 aa14.58□□□□□ -0.08
RERE-217ENST00000507012 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.08
RERE-217ENST00000507012 FHDC1Q9C0D6 1143 aaPredicted RBP14.58□□□□□ -0.08
RERE-217ENST00000507012 COL5A3P25940 1745 aaPredicted RBP14.58□□□□□ -0.08
RERE-217ENST00000507012 RPS6KA4O75676 772 aa14.57□□□□□ -0.08
RERE-217ENST00000507012 PHF14O94880 888 aa14.57□□□□□ -0.08
RERE-217ENST00000507012 TRAPPC3LQ5T215 181 aa14.57□□□□□ -0.08
RERE-217ENST00000507012 IL17REQ8NFR9 667 aa14.57□□□□□ -0.08
RERE-217ENST00000507012 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
RERE-217ENST00000507012 TEX13AQ9BXU3 409 aaPredicted RBP14.56□□□□□ -0.08
RERE-217ENST00000507012 CRKLP46109 303 aaKnown RBP14.55□□□□□ -0.08
RERE-217ENST00000507012 MAPK8IP3Q9UPT6 1336 aa14.55□□□□□ -0.08
RERE-217ENST00000507012 STARD3NLO95772 234 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 RFC4P35249 363 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 SLC39A6Q13433 755 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 MSL1Q68DK7 614 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 ZNF790Q6PG37 636 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 NLGN1Q8N2Q7 840 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 KCPQ6ZWJ8 1503 aa14.54□□□□□ -0.08
RERE-217ENST00000507012 UBR2Q8IWV8 1755 aa14.53□□□□□ -0.08
RERE-217ENST00000507012 TJP1Q07157 1748 aa14.53□□□□□ -0.08
RERE-217ENST00000507012 AMIGO3Q86WK7 504 aa14.53□□□□□ -0.08
RERE-217ENST00000507012 CCDC87Q9NVE4 849 aa14.53□□□□□ -0.08
RERE-217ENST00000507012 CD2APQ9Y5K6 639 aa14.53□□□□□ -0.08
RERE-217ENST00000507012 SIPA1L3O60292 1781 aaPredicted RBP14.52□□□□□ -0.08
RERE-217ENST00000507012 BTBD11A6QL63 1104 aa14.52□□□□□ -0.09
RERE-217ENST00000507012 DNAJC10Q8IXB1 793 aa14.52□□□□□ -0.09
RERE-217ENST00000507012 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.09
RERE-217ENST00000507012 PLEKHF1Q96S99 279 aa14.52□□□□□ -0.09
RERE-217ENST00000507012 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.09
RERE-217ENST00000507012 MYH14Q7Z406 1995 aaKnown RBP14.52□□□□□ -0.09
RERE-217ENST00000507012 HEG1Q9ULI3 1381 aa14.51□□□□□ -0.09
RERE-217ENST00000507012 CYP19A1P11511 503 aaPredicted RBP14.51□□□□□ -0.09
RERE-217ENST00000507012 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
RERE-217ENST00000507012 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
RERE-217ENST00000507012 ARHGEF1Q92888 912 aaKnown RBP14.51□□□□□ -0.09
RERE-217ENST00000507012 WDR43Q15061 677 aaKnown RBP eCLIP14.5□□□□□ -0.09
RERE-217ENST00000507012 INTS5Q6P9B9 1019 aaKnown RBP14.5□□□□□ -0.09
RERE-217ENST00000507012 PNISRQ8TF01 805 aaKnown RBP14.5□□□□□ -0.09
RERE-217ENST00000507012 ZNF496Q96IT1 587 aaPredicted RBP14.5□□□□□ -0.09
RERE-217ENST00000507012 SOS1Q07889 1333 aaPredicted RBP14.49□□□□□ -0.09
RERE-217ENST00000507012 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
RERE-217ENST00000507012 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
RERE-217ENST00000507012 TAF7Q15545 349 aaPredicted RBP14.49□□□□□ -0.09
RERE-217ENST00000507012 MCM10Q7L590 875 aa14.49□□□□□ -0.09
RERE-217ENST00000507012 USP42Q9H9J4 1324 aaKnown RBP14.48□□□□□ -0.09
RERE-217ENST00000507012 A0A087WZG4 1122 aa14.48□□□□□ -0.09
RERE-217ENST00000507012 ZPR1O75312 459 aa14.48□□□□□ -0.09
RERE-217ENST00000507012 MMP10P09238 476 aa14.48□□□□□ -0.09
RERE-217ENST00000507012 GYS1P13807 737 aa14.48□□□□□ -0.09
RERE-217ENST00000507012 SMIM5Q71RC9 77 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms