RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 PLA2G4EQ3MJ16 856 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 NEDD1Q8NHV4 660 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 ESYT1Q9BSJ8 1104 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 CFHR5Q9BXR6 569 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 NDUFB9Q9Y6M9 179 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 CNTNAP5Q8WYK1 1306 aa9.47□□□□□ -0.89
SPCS3-202ENST00000507001 ARID3CA6NKF2 412 aa9.46□□□□□ -0.9
SPCS3-202ENST00000507001 OIP5O43482 229 aa9.46□□□□□ -0.9
SPCS3-202ENST00000507001 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.9
SPCS3-202ENST00000507001 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
SPCS3-202ENST00000507001 MSTNO14793 375 aa9.45□□□□□ -0.9
SPCS3-202ENST00000507001 SNRKQ9NRH2 765 aa9.45□□□□□ -0.9
SPCS3-202ENST00000507001 HRH3Q9Y5N1 445 aa9.45□□□□□ -0.9
SPCS3-202ENST00000507001 UBTFP17480 764 aaKnown RBP9.44□□□□□ -0.9
SPCS3-202ENST00000507001 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
SPCS3-202ENST00000507001 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
SPCS3-202ENST00000507001 OXCT2Q9BYC2 517 aaPredicted RBP9.44□□□□□ -0.9
SPCS3-202ENST00000507001 A0A1B0GTH6 734 aa9.43□□□□□ -0.9
SPCS3-202ENST00000507001 IL2RAP01589 272 aa9.43□□□□□ -0.9
SPCS3-202ENST00000507001 ITGB2P05107 769 aa9.43□□□□□ -0.9
SPCS3-202ENST00000507001 ARID3AQ99856 593 aa9.43□□□□□ -0.9
SPCS3-202ENST00000507001 SPOCK3Q9BQ16 436 aa9.43□□□□□ -0.9
SPCS3-202ENST00000507001 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
SPCS3-202ENST00000507001 THBS1P07996 1170 aa9.42□□□□□ -0.9
SPCS3-202ENST00000507001 CENPCQ03188 943 aa9.42□□□□□ -0.9
SPCS3-202ENST00000507001 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
SPCS3-202ENST00000507001 MYCP01106 439 aaPredicted RBP9.41□□□□□ -0.9
SPCS3-202ENST00000507001 PROCP04070 461 aa9.41□□□□□ -0.9
SPCS3-202ENST00000507001 XAGE2Q96GT9 111 aa9.41□□□□□ -0.9
SPCS3-202ENST00000507001 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
SPCS3-202ENST00000507001 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
SPCS3-202ENST00000507001 RAB6BQ9NRW1 208 aa9.41□□□□□ -0.9
SPCS3-202ENST00000507001 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
SPCS3-202ENST00000507001 POM121Q96HA1 1249 aa9.4□□□□□ -0.9
SPCS3-202ENST00000507001 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
SPCS3-202ENST00000507001 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
SPCS3-202ENST00000507001 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
SPCS3-202ENST00000507001 ADAM23O75077 832 aa9.39□□□□□ -0.91
SPCS3-202ENST00000507001 ESCO1Q5FWF5 840 aa9.39□□□□□ -0.91
SPCS3-202ENST00000507001 A6NJR5 290 aa9.38□□□□□ -0.91
SPCS3-202ENST00000507001 GNASQ5JWF2 1037 aa9.38□□□□□ -0.91
SPCS3-202ENST00000507001 CCDC85AQ96PX6 553 aaPredicted RBP9.38□□□□□ -0.91
SPCS3-202ENST00000507001 GTF2E1P29083 439 aaPredicted RBP9.37□□□□□ -0.91
SPCS3-202ENST00000507001 KLRG1Q96E93 195 aa9.37□□□□□ -0.91
SPCS3-202ENST00000507001 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
SPCS3-202ENST00000507001 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
SPCS3-202ENST00000507001 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
SPCS3-202ENST00000507001 SHISA8B8ZZ34 492 aa9.36□□□□□ -0.91
SPCS3-202ENST00000507001 GOLGA6L1Q8N7Z2 621 aa9.36□□□□□ -0.91
SPCS3-202ENST00000507001 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
SPCS3-202ENST00000507001 RAD21O60216 631 aa9.35□□□□□ -0.91
SPCS3-202ENST00000507001 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
SPCS3-202ENST00000507001 SNRPNP63162 240 aaKnown RBP9.35□□□□□ -0.91
SPCS3-202ENST00000507001 C4orf17Q53FE4 359 aa9.35□□□□□ -0.91
SPCS3-202ENST00000507001 TMEM214Q6NUQ4 689 aaKnown RBP9.35□□□□□ -0.91
SPCS3-202ENST00000507001 PGBD3Q8N328 593 aa9.35□□□□□ -0.91
SPCS3-202ENST00000507001 CRISPLD1Q9H336 500 aa9.35□□□□□ -0.91
SPCS3-202ENST00000507001 PHKA2P46019 1235 aa9.34□□□□□ -0.91
SPCS3-202ENST00000507001 EFHC2Q5JST6 749 aa9.34□□□□□ -0.91
SPCS3-202ENST00000507001 PROSER2Q86WR7 435 aaPredicted RBP9.34□□□□□ -0.91
SPCS3-202ENST00000507001 GALNT6Q8NCL4 622 aa9.34□□□□□ -0.91
SPCS3-202ENST00000507001 RHBDD1Q8TEB9 315 aa9.34□□□□□ -0.91
SPCS3-202ENST00000507001 NDFIP2Q9NV92 336 aa9.34□□□□□ -0.91
SPCS3-202ENST00000507001 USP4Q13107 963 aa9.33□□□□□ -0.92
SPCS3-202ENST00000507001 SLCO4C1Q6ZQN7 724 aa9.33□□□□□ -0.92
SPCS3-202ENST00000507001 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
SPCS3-202ENST00000507001 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
SPCS3-202ENST00000507001 PHTF2Q8N3S3 785 aa9.33□□□□□ -0.92
SPCS3-202ENST00000507001 MSX1P28360 303 aa9.32□□□□□ -0.92
SPCS3-202ENST00000507001 EDARADDQ8WWZ3 215 aa9.32□□□□□ -0.92
SPCS3-202ENST00000507001 GDPD2Q9HCC8 539 aa9.32□□□□□ -0.92
SPCS3-202ENST00000507001 CHIC2Q9UKJ5 165 aa9.32□□□□□ -0.92
SPCS3-202ENST00000507001 TBC1D2BQ9UPU7 963 aa9.32□□□□□ -0.92
SPCS3-202ENST00000507001 COG6Q9Y2V7 657 aa9.32□□□□□ -0.92
SPCS3-202ENST00000507001 PIK3R2O00459 728 aa9.31□□□□□ -0.92
SPCS3-202ENST00000507001 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
SPCS3-202ENST00000507001 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
SPCS3-202ENST00000507001 RUBCNLQ9H714 662 aa9.31□□□□□ -0.92
SPCS3-202ENST00000507001 ETNK1Q9HBU6 452 aa9.31□□□□□ -0.92
SPCS3-202ENST00000507001 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
SPCS3-202ENST00000507001 KRBA1A5PL33 1030 aa9.3□□□□□ -0.92
SPCS3-202ENST00000507001 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
SPCS3-202ENST00000507001 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
SPCS3-202ENST00000507001 FNBP4Q8N3X1 1017 aaPredicted RBP9.3□□□□□ -0.92
SPCS3-202ENST00000507001 CCDC82Q8N4S0 544 aa9.3□□□□□ -0.92
SPCS3-202ENST00000507001 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
SPCS3-202ENST00000507001 BMP4P12644 408 aa9.29□□□□□ -0.92
SPCS3-202ENST00000507001 FGFR3P22607 806 aa9.29□□□□□ -0.92
SPCS3-202ENST00000507001 COL8A1P27658 744 aa9.29□□□□□ -0.92
SPCS3-202ENST00000507001 ABL2P42684 1182 aa9.29□□□□□ -0.92
SPCS3-202ENST00000507001 FIGNL1Q6PIW4 674 aa9.29□□□□□ -0.92
SPCS3-202ENST00000507001 ABHD17AQ96GS6 310 aa9.29□□□□□ -0.92
SPCS3-202ENST00000507001 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
SPCS3-202ENST00000507001 C2CD2LO14523 706 aa9.28□□□□□ -0.92
SPCS3-202ENST00000507001 BNIP3LO60238 219 aa9.28□□□□□ -0.92
SPCS3-202ENST00000507001 ARAFP10398 606 aa9.28□□□□□ -0.92
SPCS3-202ENST00000507001 TLR1Q15399 786 aa9.28□□□□□ -0.92
SPCS3-202ENST00000507001 SLFNL1Q499Z3 407 aa9.28□□□□□ -0.92
SPCS3-202ENST00000507001 LINC00114Q6XXX2 140 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms