RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
CALCOCO2-208ENST00000506971 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
CALCOCO2-208ENST00000506971 NANOS1Q8WY41 292 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-208ENST00000506971 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
CALCOCO2-208ENST00000506971 USP17L5A8MUK1 530 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 F11P03951 625 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 INHAP05111 366 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 PLA2G4AP47712 749 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 GTF2IP78347 998 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 KRT76Q01546 638 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 DBN1Q16643 649 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 TRIM22Q8IYM9 498 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 NUCKS1Q9H1E3 243 aaKnown RBP8.33□□□□□ -1.08
CALCOCO2-208ENST00000506971 SPATA31C2B4DYI2 1134 aa8.32□□□□□ -1.08
CALCOCO2-208ENST00000506971 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
CALCOCO2-208ENST00000506971 RUBCNLQ9H714 662 aa8.32□□□□□ -1.08
CALCOCO2-208ENST00000506971 SCNN1DP51172 638 aa8.31□□□□□ -1.08
CALCOCO2-208ENST00000506971 TBC1D9Q6ZT07 1266 aa8.31□□□□□ -1.08
CALCOCO2-208ENST00000506971 RHBDD1Q8TEB9 315 aa8.31□□□□□ -1.08
CALCOCO2-208ENST00000506971 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
CALCOCO2-208ENST00000506971 A0A1B0GTH6 734 aa8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 SMTNP53814 917 aa8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 GLMNQ92990 594 aa8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
CALCOCO2-208ENST00000506971 MSX1P28360 303 aa8.29□□□□□ -1.08
CALCOCO2-208ENST00000506971 WDR44Q5JSH3 913 aa8.29□□□□□ -1.08
CALCOCO2-208ENST00000506971 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
CALCOCO2-208ENST00000506971 USP17L3A6NCW0 530 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 USP17L4A6NCW7 530 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 BACH1O14867 736 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 ADAMTS2O95450 1211 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 USP17L1Q7RTZ2 530 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 PPARGC1BQ86YN6 1023 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 PCDHGA11Q9Y5H2 935 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 PARP3Q9Y6F1 533 aa8.28□□□□□ -1.08
CALCOCO2-208ENST00000506971 TMEM229AB2RXF0 380 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 EFHC2Q5JST6 749 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 TBCELQ5QJ74 424 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 TPCN2Q8NHX9 752 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 GMCL1Q96IK5 515 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 GJA3Q9Y6H8 435 aa8.27□□□□□ -1.09
CALCOCO2-208ENST00000506971 A6NJY4 79 aa8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 ATP9BO43861 1147 aa8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 MX2P20592 715 aa8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 WHAMMQ8TF30 809 aa8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 ZNF594Q96JF6 807 aaPredicted RBP8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 TFIP11Q9UBB9 837 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 MKRN1Q9UHC7 482 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 ZNF232Q9UNY5 417 aa8.26□□□□□ -1.09
CALCOCO2-208ENST00000506971 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 GAS6Q14393 721 aa8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 BICDL1Q6ZP65 573 aa8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 MBIPQ9NS73 344 aa8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 DNAAF2Q9NVR5 837 aaKnown RBP8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 ZNF358Q9NW07 568 aa8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 ZNF777Q9ULD5 760 aaPredicted RBP8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 NSFL1CQ9UNZ2 370 aaKnown RBP8.25□□□□□ -1.09
CALCOCO2-208ENST00000506971 MARSP56192 900 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 NBPF1Q3BBV0 1214 aa8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 ZNF385CQ66K41 422 aaPredicted RBP8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 CCDC102BQ68D86 513 aa8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 TNS4Q8IZW8 715 aa8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 PHF24Q9UPV7 400 aa8.24□□□□□ -1.09
CALCOCO2-208ENST00000506971 IGF1RP08069 1367 aa8.23□□□□□ -1.09
CALCOCO2-208ENST00000506971 TATP17735 454 aaPredicted RBP8.23□□□□□ -1.09
CALCOCO2-208ENST00000506971 RASA1P20936 1047 aa8.23□□□□□ -1.09
CALCOCO2-208ENST00000506971 SRSF11Q05519 484 aaKnown RBP8.23□□□□□ -1.09
CALCOCO2-208ENST00000506971 USP3Q9Y6I4 520 aa8.23□□□□□ -1.09
CALCOCO2-208ENST00000506971 CDK2AP1O14519 115 aa8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 FNBP4Q8N3X1 1017 aaPredicted RBP8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 NEDD1Q8NHV4 660 aa8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 NEUROD4Q9HD90 331 aa8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 KIAA1024Q9UPX6 916 aa8.22□□□□□ -1.09
CALCOCO2-208ENST00000506971 LMOD1P29536 600 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-208ENST00000506971 CLDN10P78369 228 aa8.21□□□□□ -1.1
CALCOCO2-208ENST00000506971 ABHD17AQ96GS6 310 aa8.21□□□□□ -1.1
CALCOCO2-208ENST00000506971 PALM3A6NDB9 673 aaPredicted RBP8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 A6NJR5 290 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 SFI1A8K8P3 1242 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 LGR5O75473 907 aa8.2□□□□□ -1.1
CALCOCO2-208ENST00000506971 SLURP2P0DP57 97 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms