RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
DDX41-206ENST00000506965 SPG7Q9UQ90 795 aa18.57■□□□□ 0.56
DDX41-206ENST00000506965 TJP1Q07157 1748 aa18.57■□□□□ 0.56
DDX41-206ENST00000506965 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
DDX41-206ENST00000506965 ADAMTS7Q9UKP4 1686 aa18.56■□□□□ 0.56
DDX41-206ENST00000506965 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
DDX41-206ENST00000506965 FLAD1Q8NFF5 587 aa18.55■□□□□ 0.56
DDX41-206ENST00000506965 TMOD3Q9NYL9 352 aa18.55■□□□□ 0.56
DDX41-206ENST00000506965 GIGYF1O75420 1035 aaPredicted RBP18.54■□□□□ 0.56
DDX41-206ENST00000506965 SSFA2P28290 1259 aa18.54■□□□□ 0.56
DDX41-206ENST00000506965 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
DDX41-206ENST00000506965 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
DDX41-206ENST00000506965 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
DDX41-206ENST00000506965 IFNL2Q8IZJ0 200 aa18.53■□□□□ 0.56
DDX41-206ENST00000506965 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
DDX41-206ENST00000506965 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
DDX41-206ENST00000506965 GNPATO15228 680 aa18.52■□□□□ 0.56
DDX41-206ENST00000506965 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
DDX41-206ENST00000506965 TIMELESSQ9UNS1 1208 aa18.52■□□□□ 0.56
DDX41-206ENST00000506965 PANK3Q9H999 370 aa18.51■□□□□ 0.55
DDX41-206ENST00000506965 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
DDX41-206ENST00000506965 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
DDX41-206ENST00000506965 C10orf71Q711Q0 1435 aa18.48■□□□□ 0.55
DDX41-206ENST00000506965 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
DDX41-206ENST00000506965 MMP10P09238 476 aa18.47■□□□□ 0.55
DDX41-206ENST00000506965 ARFGEF1Q9Y6D6 1849 aa18.46■□□□□ 0.55
DDX41-206ENST00000506965 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
DDX41-206ENST00000506965 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
DDX41-206ENST00000506965 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
DDX41-206ENST00000506965 GYS1P13807 737 aa18.44■□□□□ 0.54
DDX41-206ENST00000506965 ZNF530Q6P9A1 599 aaPredicted RBP18.44■□□□□ 0.54
DDX41-206ENST00000506965 DCAF5Q96JK2 942 aa18.44■□□□□ 0.54
DDX41-206ENST00000506965 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
DDX41-206ENST00000506965 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
DDX41-206ENST00000506965 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
DDX41-206ENST00000506965 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
DDX41-206ENST00000506965 SBF1O95248 1867 aa18.42■□□□□ 0.54
DDX41-206ENST00000506965 IL13P35225 146 aa18.42■□□□□ 0.54
DDX41-206ENST00000506965 A0A0G2JLW4 131 aa18.41■□□□□ 0.54
DDX41-206ENST00000506965 KIF3CO14782 793 aa18.41■□□□□ 0.54
DDX41-206ENST00000506965 RC3H1Q5TC82 1133 aaKnown RBP18.41■□□□□ 0.54
DDX41-206ENST00000506965 RTCBQ9Y3I0 505 aaKnown RBP18.41■□□□□ 0.54
DDX41-206ENST00000506965 MRC1P22897 1456 aa18.4■□□□□ 0.54
DDX41-206ENST00000506965 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
DDX41-206ENST00000506965 RPS6KA4O75676 772 aa18.4■□□□□ 0.54
DDX41-206ENST00000506965 KCNA3P22001 575 aa18.4■□□□□ 0.54
DDX41-206ENST00000506965 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
DDX41-206ENST00000506965 AMER1Q5JTC6 1135 aaPredicted RBP18.4■□□□□ 0.54
DDX41-206ENST00000506965 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
DDX41-206ENST00000506965 GPBP1L1Q9HC44 474 aaPredicted RBP18.4■□□□□ 0.54
DDX41-206ENST00000506965 SRP68Q9UHB9 627 aaKnown RBP18.4■□□□□ 0.54
DDX41-206ENST00000506965 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.54
DDX41-206ENST00000506965 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
DDX41-206ENST00000506965 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
DDX41-206ENST00000506965 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
DDX41-206ENST00000506965 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
DDX41-206ENST00000506965 NRXN2Q9P2S2 1712 aa18.38■□□□□ 0.53
DDX41-206ENST00000506965 DPEP1P16444 411 aa18.38■□□□□ 0.53
DDX41-206ENST00000506965 CABP4P57796 275 aa18.38■□□□□ 0.53
DDX41-206ENST00000506965 DDR1Q08345 913 aa18.38■□□□□ 0.53
DDX41-206ENST00000506965 MORC1Q86VD1 984 aa18.38■□□□□ 0.53
DDX41-206ENST00000506965 CRKLP46109 303 aaKnown RBP18.37■□□□□ 0.53
DDX41-206ENST00000506965 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
DDX41-206ENST00000506965 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
DDX41-206ENST00000506965 SIPA1L3O60292 1781 aaPredicted RBP18.36■□□□□ 0.53
DDX41-206ENST00000506965 HSP90AB1P08238 724 aaKnown RBP18.36■□□□□ 0.53
DDX41-206ENST00000506965 MTHFSP49914 203 aa18.36■□□□□ 0.53
DDX41-206ENST00000506965 FKBP8Q14318 412 aa18.36■□□□□ 0.53
DDX41-206ENST00000506965 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
DDX41-206ENST00000506965 NLGN1Q8N2Q7 840 aa18.36■□□□□ 0.53
DDX41-206ENST00000506965 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
DDX41-206ENST00000506965 USP42Q9H9J4 1324 aaKnown RBP18.35■□□□□ 0.53
DDX41-206ENST00000506965 ADRA2BP18089 450 aa18.35■□□□□ 0.53
DDX41-206ENST00000506965 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
DDX41-206ENST00000506965 KIF7Q2M1P5 1343 aa18.34■□□□□ 0.53
DDX41-206ENST00000506965 TGFB2P61812 414 aa18.34■□□□□ 0.53
DDX41-206ENST00000506965 BCS1LQ9Y276 419 aa18.34■□□□□ 0.53
DDX41-206ENST00000506965 HSPA6P17066 643 aa18.33■□□□□ 0.52
DDX41-206ENST00000506965 RFC4P35249 363 aa18.33■□□□□ 0.52
DDX41-206ENST00000506965 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.52
DDX41-206ENST00000506965 CCDC88AQ3V6T2 1871 aa18.33■□□□□ 0.52
DDX41-206ENST00000506965 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
DDX41-206ENST00000506965 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
DDX41-206ENST00000506965 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
DDX41-206ENST00000506965 HMOX1P09601 288 aa18.31■□□□□ 0.52
DDX41-206ENST00000506965 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
DDX41-206ENST00000506965 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
DDX41-206ENST00000506965 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
DDX41-206ENST00000506965 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
DDX41-206ENST00000506965 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
DDX41-206ENST00000506965 POLRMTO00411 1230 aaKnown RBP18.29■□□□□ 0.52
DDX41-206ENST00000506965 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
DDX41-206ENST00000506965 TM4SF1P30408 202 aa18.29■□□□□ 0.52
DDX41-206ENST00000506965 CHRNA5P30532 468 aa18.29■□□□□ 0.52
DDX41-206ENST00000506965 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
DDX41-206ENST00000506965 KNSTRNQ9Y448 316 aa18.29■□□□□ 0.52
DDX41-206ENST00000506965 PARP3Q9Y6F1 533 aa18.29■□□□□ 0.52
DDX41-206ENST00000506965 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
DDX41-206ENST00000506965 FCHSD2O94868 740 aa18.28■□□□□ 0.52
DDX41-206ENST00000506965 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms