RNA–Protein interactions for RNA: ENST00000506811.5

CAST-217, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-217ENST00000506811 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
CAST-217ENST00000506811 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
CAST-217ENST00000506811 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
CAST-217ENST00000506811 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
CAST-217ENST00000506811 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
CAST-217ENST00000506811 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
CAST-217ENST00000506811 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
CAST-217ENST00000506811 SIN3AQ96ST3 1273 aa12.01□□□□□ -0.49
CAST-217ENST00000506811 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
CAST-217ENST00000506811 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
CAST-217ENST00000506811 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
CAST-217ENST00000506811 TMF1P82094 1093 aa12□□□□□ -0.49
CAST-217ENST00000506811 DCAF5Q96JK2 942 aa12□□□□□ -0.49
CAST-217ENST00000506811 GYS1P13807 737 aa11.99□□□□□ -0.49
CAST-217ENST00000506811 RASSF7Q02833 373 aa11.99□□□□□ -0.49
CAST-217ENST00000506811 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
CAST-217ENST00000506811 RTL1A6NKG5 1358 aa11.99□□□□□ -0.49
CAST-217ENST00000506811 CHRNA5P30532 468 aa11.98□□□□□ -0.49
CAST-217ENST00000506811 NLGN1Q8N2Q7 840 aa11.98□□□□□ -0.49
CAST-217ENST00000506811 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
CAST-217ENST00000506811 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
CAST-217ENST00000506811 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
CAST-217ENST00000506811 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
CAST-217ENST00000506811 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
CAST-217ENST00000506811 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
CAST-217ENST00000506811 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
CAST-217ENST00000506811 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
CAST-217ENST00000506811 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
CAST-217ENST00000506811 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
CAST-217ENST00000506811 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
CAST-217ENST00000506811 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
CAST-217ENST00000506811 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
CAST-217ENST00000506811 SMG6Q86US8 1419 aaKnown RBP11.96□□□□□ -0.49
CAST-217ENST00000506811 FOXN1O15353 648 aa11.96□□□□□ -0.49
CAST-217ENST00000506811 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.49
CAST-217ENST00000506811 SBF1O95248 1867 aa11.95□□□□□ -0.5
CAST-217ENST00000506811 INSRP06213 1382 aa11.95□□□□□ -0.5
CAST-217ENST00000506811 DDR1Q08345 913 aa11.95□□□□□ -0.5
CAST-217ENST00000506811 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
CAST-217ENST00000506811 CARD11Q9BXL7 1154 aa11.95□□□□□ -0.5
CAST-217ENST00000506811 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
CAST-217ENST00000506811 KDRP35968 1356 aa11.94□□□□□ -0.5
CAST-217ENST00000506811 POTECB2RU33 542 aa11.94□□□□□ -0.5
CAST-217ENST00000506811 FYB1O15117 783 aa11.94□□□□□ -0.5
CAST-217ENST00000506811 VEGFAP15692 232 aaPredicted RBP11.93□□□□□ -0.5
CAST-217ENST00000506811 RFC4P35249 363 aa11.93□□□□□ -0.5
CAST-217ENST00000506811 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CAST-217ENST00000506811 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
CAST-217ENST00000506811 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
CAST-217ENST00000506811 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
CAST-217ENST00000506811 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
CAST-217ENST00000506811 EMILIN1Q9Y6C2 1016 aa11.92□□□□□ -0.5
CAST-217ENST00000506811 FLT4P35916 1363 aa11.92□□□□□ -0.5
CAST-217ENST00000506811 PHKG2P15735 406 aa11.91□□□□□ -0.5
CAST-217ENST00000506811 ADRA2BP18089 450 aa11.91□□□□□ -0.5
CAST-217ENST00000506811 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
CAST-217ENST00000506811 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
CAST-217ENST00000506811 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.5
CAST-217ENST00000506811 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
CAST-217ENST00000506811 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
CAST-217ENST00000506811 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
CAST-217ENST00000506811 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
CAST-217ENST00000506811 PUS7Q96PZ0 661 aaKnown RBP11.9□□□□□ -0.5
CAST-217ENST00000506811 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
CAST-217ENST00000506811 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
CAST-217ENST00000506811 TESK2Q96S53 571 aa11.89□□□□□ -0.51
CAST-217ENST00000506811 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
CAST-217ENST00000506811 LMNB1P20700 586 aa11.88□□□□□ -0.51
CAST-217ENST00000506811 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
CAST-217ENST00000506811 EYA1Q99502 592 aa11.88□□□□□ -0.51
CAST-217ENST00000506811 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
CAST-217ENST00000506811 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
CAST-217ENST00000506811 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
CAST-217ENST00000506811 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
CAST-217ENST00000506811 NFKBIEO00221 500 aa11.87□□□□□ -0.51
CAST-217ENST00000506811 PPM1GO15355 546 aaPredicted RBP11.87□□□□□ -0.51
CAST-217ENST00000506811 LBX1P52954 281 aa11.87□□□□□ -0.51
CAST-217ENST00000506811 ABHD8Q96I13 439 aa11.87□□□□□ -0.51
CAST-217ENST00000506811 TM4SF1P30408 202 aa11.86□□□□□ -0.51
CAST-217ENST00000506811 CTCFP49711 727 aaPredicted RBP11.86□□□□□ -0.51
CAST-217ENST00000506811 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
CAST-217ENST00000506811 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
CAST-217ENST00000506811 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
CAST-217ENST00000506811 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
CAST-217ENST00000506811 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
CAST-217ENST00000506811 VEGFBP49765 207 aa11.85□□□□□ -0.51
CAST-217ENST00000506811 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CAST-217ENST00000506811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.513e-6■■□□□ 13.8
CAST-217ENST00000506811 TIAM2Q8IVF5 1701 aa11.85□□□□□ -0.51
CAST-217ENST00000506811 KIF24Q5T7B8 1368 aa11.84□□□□□ -0.51
CAST-217ENST00000506811 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
CAST-217ENST00000506811 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
CAST-217ENST00000506811 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
CAST-217ENST00000506811 CCDC88AQ3V6T2 1871 aa11.84□□□□□ -0.51
CAST-217ENST00000506811 WBP1LQ9NX94 342 aa11.83□□□□□ -0.52
CAST-217ENST00000506811 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
CAST-217ENST00000506811 CARMIL3Q8ND23 1372 aa11.82□□□□□ -0.52
CAST-217ENST00000506811 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
CAST-217ENST00000506811 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
CAST-217ENST00000506811 HSPA8P11142 646 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms