RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 CDK12Q9NYV4 1490 aaPredicted RBP7.73□□□□□ -1.17
USP46-206ENST00000506707 KIF20BQ96Q89 1820 aa7.73□□□□□ -1.17
USP46-206ENST00000506707 PARD3Q8TEW0 1356 aa7.72□□□□□ -1.17
USP46-206ENST00000506707 NRAPQ86VF7 1730 aa7.72□□□□□ -1.17
USP46-206ENST00000506707 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.72□□□□□ -1.17
USP46-206ENST00000506707 RALBP1Q15311 655 aa7.72□□□□□ -1.17
USP46-206ENST00000506707 PRKRIP1Q9H875 184 aaPredicted RBP7.72□□□□□ -1.17
USP46-206ENST00000506707 PEAK1Q9H792 1746 aa7.72□□□□□ -1.17
USP46-206ENST00000506707 RGS12O14924 1447 aa7.71□□□□□ -1.17
USP46-206ENST00000506707 RIMBP2O15034 1052 aa7.71□□□□□ -1.18
USP46-206ENST00000506707 IL2RBP14784 551 aa7.71□□□□□ -1.18
USP46-206ENST00000506707 PDAP1Q13442 181 aaKnown RBP7.71□□□□□ -1.18
USP46-206ENST00000506707 FKBP8Q14318 412 aa7.71□□□□□ -1.18
USP46-206ENST00000506707 USHBP1Q8N6Y0 703 aa7.71□□□□□ -1.18
USP46-206ENST00000506707 CDCA7Q9BWT1 371 aaPredicted RBP7.71□□□□□ -1.18
USP46-206ENST00000506707 DISP2A7MBM2 1401 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 LTN1O94822 1766 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 A0A0G2JS52 829 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 EXOC5O00471 708 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 DIAPH1O60610 1272 aaKnown RBP7.7□□□□□ -1.18
USP46-206ENST00000506707 MYT1Q01538 1121 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 FAM182BQ5T319 152 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 DPY19L2Q6NUT2 758 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 KRT27Q7Z3Y8 459 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 IGSF1Q8N6C5 1336 aa7.7□□□□□ -1.18
USP46-206ENST00000506707 ANKRD26Q9UPS8 1709 aa7.69□□□□□ -1.18
USP46-206ENST00000506707 PTGER2P43116 358 aa7.69□□□□□ -1.18
USP46-206ENST00000506707 PDE3BQ13370 1112 aa7.69□□□□□ -1.18
USP46-206ENST00000506707 DDB1Q16531 1140 aa7.69□□□□□ -1.18
USP46-206ENST00000506707 RGPD5Q99666 1765 aa7.69□□□□□ -1.18
USP46-206ENST00000506707 NCAPD2Q15021 1401 aa7.69□□□□□ -1.18
USP46-206ENST00000506707 MAP2P11137 1827 aaKnown RBP7.68□□□□□ -1.18
USP46-206ENST00000506707 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
USP46-206ENST00000506707 SULT6B1Q6IMI4 303 aa7.68□□□□□ -1.18
USP46-206ENST00000506707 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
USP46-206ENST00000506707 KLHL34Q8N239 644 aa7.68□□□□□ -1.18
USP46-206ENST00000506707 MARCH10Q8NA82 808 aaPredicted RBP7.68□□□□□ -1.18
USP46-206ENST00000506707 RAPGEF4Q8WZA2 1011 aa7.68□□□□□ -1.18
USP46-206ENST00000506707 CFAP53Q96M91 514 aa7.68□□□□□ -1.18
USP46-206ENST00000506707 MYBBP1AQ9BQG0 1328 aaKnown RBP7.68□□□□□ -1.18
USP46-206ENST00000506707 COL3A1P02461 1466 aaPredicted RBP7.68□□□□□ -1.18
USP46-206ENST00000506707 TATP17735 454 aaPredicted RBP7.67□□□□□ -1.18
USP46-206ENST00000506707 ZCRB1Q8TBF4 217 aaKnown RBP7.67□□□□□ -1.18
USP46-206ENST00000506707 THSD7AQ9UPZ6 1657 aa7.67□□□□□ -1.18
USP46-206ENST00000506707 SOCS7O14512 581 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 U2SURPO15042 1029 aaKnown RBP7.66□□□□□ -1.18
USP46-206ENST00000506707 CYP27B1O15528 508 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 ANP32CO43423 234 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 HMOX1P09601 288 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 FAM196AQ6ZSG2 479 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 DDX54Q8TDD1 881 aaKnown RBP7.66□□□□□ -1.18
USP46-206ENST00000506707 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP46-206ENST00000506707 ZSWIM6Q9HCJ5 1215 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 NUDCQ9Y266 331 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 KDRP35968 1356 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 OVOS2A0A0G2JMS6 1433 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 MEGF6O75095 1541 aa7.66□□□□□ -1.18
USP46-206ENST00000506707 CCDC184Q52MB2 194 aa7.65□□□□□ -1.18
USP46-206ENST00000506707 FAM208AQ9UK61 1670 aaKnown RBP7.65□□□□□ -1.18
USP46-206ENST00000506707 SPG7Q9UQ90 795 aa7.65□□□□□ -1.18
USP46-206ENST00000506707 TNS2Q63HR2 1409 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 FCHSD2O94868 740 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 U2AF1L5P0DN76 240 aaPredicted RBP7.64□□□□□ -1.19
USP46-206ENST00000506707 U2AF1Q01081 240 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP46-206ENST00000506707 NKX1-1Q15270 411 aaPredicted RBP7.64□□□□□ -1.19
USP46-206ENST00000506707 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 PLEKHO1Q53GL0 409 aaPredicted RBP7.64□□□□□ -1.19
USP46-206ENST00000506707 PTF1AQ7RTS3 328 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 ZNF687Q8N1G0 1237 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 PHACTR3Q96KR7 559 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 RSPH6AQ9H0K4 717 aa7.64□□□□□ -1.19
USP46-206ENST00000506707 BCL9O00512 1426 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 KCNQ2O43526 872 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 TRIM37O94972 964 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 PHKG2P15735 406 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 MTHFSDQ2M296 383 aaKnown RBP7.63□□□□□ -1.19
USP46-206ENST00000506707 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 PLEKHF1Q96S99 279 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 RGPD2P0DJD1 1756 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 EP400Q96L91 3159 aa7.63□□□□□ -1.19
USP46-206ENST00000506707 PLEKHG2Q9H7P9 1386 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 PCDH11XQ9BZA7 1347 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 PCDH11YQ9BZA8 1340 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 RGPD1P0DJD0 1748 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 PARP4Q9UKK3 1724 aaKnown RBP7.62□□□□□ -1.19
USP46-206ENST00000506707 PRKAR2BP31323 418 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 PRIM1P49642 420 aaKnown RBP7.62□□□□□ -1.19
USP46-206ENST00000506707 VASPP50552 380 aaPredicted RBP7.62□□□□□ -1.19
USP46-206ENST00000506707 IFNL2Q8IZJ0 200 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 ACSBG1Q96GR2 724 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 ADAMTS8Q9UP79 889 aa7.62□□□□□ -1.19
USP46-206ENST00000506707 LRRC37A3O60309 1634 aa7.61□□□□□ -1.19
USP46-206ENST00000506707 DIEXFQ68CQ4 756 aaKnown RBP7.61□□□□□ -1.19
USP46-206ENST00000506707 ZNF530Q6P9A1 599 aaPredicted RBP7.61□□□□□ -1.19
USP46-206ENST00000506707 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
USP46-206ENST00000506707 BCL11BQ9C0K0 894 aaPredicted RBP7.61□□□□□ -1.19
USP46-206ENST00000506707 BRWD3Q6RI45 1802 aa7.61□□□□□ -1.19
USP46-206ENST00000506707 APBA3O96018 575 aa7.6□□□□□ -1.19
USP46-206ENST00000506707 AKAP4Q5JQC9 854 aa7.6□□□□□ -1.19
USP46-206ENST00000506707 DCAF5Q96JK2 942 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms