RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 MTFR1Q15390 333 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 CDCA8Q53HL2 280 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 C6orf118Q5T5N4 469 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 LARP1Q6PKG0 1096 aaKnown RBP5.73□□□□□ -1.49
GYPB-207ENST00000506679 ANKMY2Q8IV38 441 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 TPCN2Q8NHX9 752 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 RNF217Q8TC41 542 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 CNKSR1Q969H4 720 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 ZNF594Q96JF6 807 aaPredicted RBP5.73□□□□□ -1.49
GYPB-207ENST00000506679 INSM2Q96T92 566 aaPredicted RBP5.73□□□□□ -1.49
GYPB-207ENST00000506679 ZNF358Q9NW07 568 aa5.73□□□□□ -1.49
GYPB-207ENST00000506679 DPYDQ12882 1025 aa5.72□□□□□ -1.49
GYPB-207ENST00000506679 ZNF295-AS1Q8N0V1 137 aa5.72□□□□□ -1.49
GYPB-207ENST00000506679 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
GYPB-207ENST00000506679 TRIM47Q96LD4 638 aa5.72□□□□□ -1.49
GYPB-207ENST00000506679 GRIP2Q9C0E4 1043 aa5.72□□□□□ -1.49
GYPB-207ENST00000506679 SENP2Q9HC62 589 aa5.72□□□□□ -1.49
GYPB-207ENST00000506679 GMPR2Q9P2T1 348 aaKnown RBP5.72□□□□□ -1.49
GYPB-207ENST00000506679 NOVA2Q9UNW9 492 aaKnown RBP5.72□□□□□ -1.49
GYPB-207ENST00000506679 TTLL8A6PVC2 850 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 MEN1O00255 615 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 SMTNP53814 917 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 SEC13P55735 322 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 FOXK2Q01167 660 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 CENPCQ03188 943 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 PSME1Q06323 249 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 FAM69CQ0P6D2 419 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 STK32AQ8WU08 396 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 KIFC2Q96AC6 838 aa5.71□□□□□ -1.5
GYPB-207ENST00000506679 IQSEC3Q9UPP2 1182 aaPredicted RBP5.71□□□□□ -1.5
GYPB-207ENST00000506679 SFI1A8K8P3 1242 aa5.7□□□□□ -1.5
GYPB-207ENST00000506679 BACH1O14867 736 aa5.7□□□□□ -1.5
GYPB-207ENST00000506679 TMEM164Q5U3C3 297 aa5.7□□□□□ -1.5
GYPB-207ENST00000506679 NLRP3Q96P20 1036 aa5.7□□□□□ -1.5
GYPB-207ENST00000506679 POLMQ9NP87 494 aaPredicted RBP5.7□□□□□ -1.5
GYPB-207ENST00000506679 DNMT3LQ9UJW3 386 aa5.7□□□□□ -1.5
GYPB-207ENST00000506679 ACIN1Q9UKV3 1341 aaKnown RBP5.7□□□□□ -1.5
GYPB-207ENST00000506679 A6NJY4 79 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 TMEM88BA6NKF7 163 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 POTECB2RU33 542 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 SPATA31C2B4DYI2 1134 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 TLR1Q15399 786 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 POTEAQ6S8J7 498 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 PPARGC1BQ86YN6 1023 aaKnown RBP5.69□□□□□ -1.5
GYPB-207ENST00000506679 FAM200AQ8TCP9 573 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 SCHIP1Q9P0W5 487 aaPredicted RBP5.69□□□□□ -1.5
GYPB-207ENST00000506679 SERTAD1Q9UHV2 236 aa5.69□□□□□ -1.5
GYPB-207ENST00000506679 CDK2AP1O14519 115 aa5.68□□□□□ -1.5
GYPB-207ENST00000506679 SNRPBP14678 240 aaKnown RBP5.68□□□□□ -1.5
GYPB-207ENST00000506679 SWI5Q1ZZU3 235 aa5.68□□□□□ -1.5
GYPB-207ENST00000506679 TSEN2Q8NCE0 465 aaKnown RBP5.68□□□□□ -1.5
GYPB-207ENST00000506679 USP3Q9Y6I4 520 aa5.68□□□□□ -1.5
GYPB-207ENST00000506679 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.67□□□□□ -1.5
GYPB-207ENST00000506679 WDR44Q5JSH3 913 aa5.67□□□□□ -1.5
GYPB-207ENST00000506679 LYSMD3Q7Z3D4 306 aa5.67□□□□□ -1.5
GYPB-207ENST00000506679 TNS4Q8IZW8 715 aa5.67□□□□□ -1.5
GYPB-207ENST00000506679 CLP1Q92989 425 aaKnown RBP5.67□□□□□ -1.5
GYPB-207ENST00000506679 ZSCAN10Q96SZ4 725 aaPredicted RBP5.67□□□□□ -1.5
GYPB-207ENST00000506679 SLAIN2Q9P270 581 aa5.67□□□□□ -1.5
GYPB-207ENST00000506679 USTQ9Y2C2 406 aa5.67□□□□□ -1.5
GYPB-207ENST00000506679 SENP3-EIF4A1A0A087X0R7 540 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 SOBPA7XYQ1 873 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 C11orf95C9JLR9 678 aaPredicted RBP5.66□□□□□ -1.5
GYPB-207ENST00000506679 C21orf2O43822 256 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 MAN1A2O60476 641 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 WEE1P30291 646 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 SLC27A3Q5K4L6 730 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 NBPF10Q6P3W6 841 aaKnown RBP5.66□□□□□ -1.5
GYPB-207ENST00000506679 NBPF15Q8N660 670 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 RETREG2Q8NC44 543 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 RHBDD1Q8TEB9 315 aa5.66□□□□□ -1.5
GYPB-207ENST00000506679 RBM19Q9Y4C8 960 aaKnown RBP5.66□□□□□ -1.5
GYPB-207ENST00000506679 FIGNL2A6NMB9 653 aa5.65□□□□□ -1.5
GYPB-207ENST00000506679 OCLNQ16625 522 aa5.65□□□□□ -1.5
GYPB-207ENST00000506679 C4orf17Q53FE4 359 aa5.65□□□□□ -1.5
GYPB-207ENST00000506679 PRICKLE2Q7Z3G6 844 aa5.65□□□□□ -1.5
GYPB-207ENST00000506679 SLC9A9Q8IVB4 645 aa5.65□□□□□ -1.5
GYPB-207ENST00000506679 STAG2Q8N3U4 1231 aa5.65□□□□□ -1.5
GYPB-207ENST00000506679 TSPAN10Q9H1Z9 355 aaPredicted RBP5.65□□□□□ -1.5
GYPB-207ENST00000506679 CSB-PGBD3P0DP91 1061 aa5.64□□□□□ -1.51
GYPB-207ENST00000506679 IGFBP4P22692 258 aa5.64□□□□□ -1.51
GYPB-207ENST00000506679 HIRAP54198 1017 aaPredicted RBP5.64□□□□□ -1.51
GYPB-207ENST00000506679 TEAD4Q15561 434 aa5.64□□□□□ -1.51
GYPB-207ENST00000506679 TMEM214Q6NUQ4 689 aaKnown RBP5.64□□□□□ -1.51
GYPB-207ENST00000506679 TAS1R3Q7RTX0 852 aa5.64□□□□□ -1.51
GYPB-207ENST00000506679 GAS2L2Q8NHY3 880 aa5.64□□□□□ -1.51
GYPB-207ENST00000506679 ZDHHC1Q8WTX9 485 aa5.64□□□□□ -1.51
GYPB-207ENST00000506679 SLC35F4A4IF30 521 aa5.63□□□□□ -1.51
GYPB-207ENST00000506679 PSMA6P60900 246 aaKnown RBP5.63□□□□□ -1.51
GYPB-207ENST00000506679 PTSQ03393 145 aa5.63□□□□□ -1.51
GYPB-207ENST00000506679 POU4F2Q12837 409 aa5.63□□□□□ -1.51
GYPB-207ENST00000506679 GNASQ5JWF2 1037 aa5.63□□□□□ -1.51
GYPB-207ENST00000506679 TBCELQ5QJ74 424 aa5.63□□□□□ -1.51
GYPB-207ENST00000506679 C2orf49Q9BVC5 232 aaPredicted RBP5.63□□□□□ -1.51
GYPB-207ENST00000506679 NIFKQ9BYG3 293 aaKnown RBP5.63□□□□□ -1.51
GYPB-207ENST00000506679 ATAD2Q6PL18 1390 aa5.63□□□□□ -1.51
GYPB-207ENST00000506679 EML1O00423 815 aa5.62□□□□□ -1.51
GYPB-207ENST00000506679 FOXO3O43524 673 aa5.62□□□□□ -1.51
GYPB-207ENST00000506679 RHOQP17081 205 aa5.62□□□□□ -1.51
GYPB-207ENST00000506679 GTF2E1P29083 439 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms