RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 A0A1W2PRU2 124 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 TMEM229AB2RXF0 380 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 CLN3Q13286 438 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 MEIOBQ8N635 442 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 SERTAD1Q9UHV2 236 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 MTMR7Q9Y216 660 aa13.31□□□□□ -0.28
RETREG1-203ENST00000506441 MEN1O00255 615 aa13.3□□□□□ -0.28
RETREG1-203ENST00000506441 DKK1O94907 266 aa13.3□□□□□ -0.28
RETREG1-203ENST00000506441 AVPP01185 164 aa13.3□□□□□ -0.28
RETREG1-203ENST00000506441 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
RETREG1-203ENST00000506441 SLC4A9Q96Q91 983 aa13.3□□□□□ -0.28
RETREG1-203ENST00000506441 CHMP3Q9Y3E7 222 aa13.3□□□□□ -0.28
RETREG1-203ENST00000506441 SCNN1DP51172 638 aa13.29□□□□□ -0.28
RETREG1-203ENST00000506441 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
RETREG1-203ENST00000506441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.29□□□□□ -0.28
RETREG1-203ENST00000506441 SMTNP53814 917 aa13.28□□□□□ -0.28
RETREG1-203ENST00000506441 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
RETREG1-203ENST00000506441 RAB6BQ9NRW1 208 aa13.28□□□□□ -0.28
RETREG1-203ENST00000506441 AXIN1O15169 862 aa13.27□□□□□ -0.29
RETREG1-203ENST00000506441 TLR1Q15399 786 aa13.27□□□□□ -0.29
RETREG1-203ENST00000506441 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
RETREG1-203ENST00000506441 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
RETREG1-203ENST00000506441 A6NJY4 79 aa13.26□□□□□ -0.29
RETREG1-203ENST00000506441 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
RETREG1-203ENST00000506441 GPC1P35052 558 aa13.26□□□□□ -0.29
RETREG1-203ENST00000506441 SMCPP49901 116 aaPredicted RBP13.26□□□□□ -0.29
RETREG1-203ENST00000506441 KCNA1Q09470 495 aa13.26□□□□□ -0.29
RETREG1-203ENST00000506441 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
RETREG1-203ENST00000506441 ZNF395Q9H8N7 513 aaPredicted RBP13.26□□□□□ -0.29
RETREG1-203ENST00000506441 BMP2P12643 396 aa13.25□□□□□ -0.29
RETREG1-203ENST00000506441 LINC00528Q8N1L1 170 aa13.25□□□□□ -0.29
RETREG1-203ENST00000506441 VTI1AQ96AJ9 217 aa13.25□□□□□ -0.29
RETREG1-203ENST00000506441 CDK2AP1O14519 115 aa13.24□□□□□ -0.29
RETREG1-203ENST00000506441 IL2RAP01589 272 aa13.24□□□□□ -0.29
RETREG1-203ENST00000506441 CENPCQ03188 943 aa13.24□□□□□ -0.29
RETREG1-203ENST00000506441 FAM69CQ0P6D2 419 aa13.24□□□□□ -0.29
RETREG1-203ENST00000506441 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
RETREG1-203ENST00000506441 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
RETREG1-203ENST00000506441 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
RETREG1-203ENST00000506441 TMEM214Q6NUQ4 689 aaKnown RBP13.23□□□□□ -0.29
RETREG1-203ENST00000506441 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
RETREG1-203ENST00000506441 ZSCAN10Q96SZ4 725 aaPredicted RBP13.23□□□□□ -0.29
RETREG1-203ENST00000506441 POLMQ9NP87 494 aaPredicted RBP13.23□□□□□ -0.29
RETREG1-203ENST00000506441 SPINT1O43278 529 aa13.22□□□□□ -0.29
RETREG1-203ENST00000506441 PRMT3O60678 531 aa13.22□□□□□ -0.29
RETREG1-203ENST00000506441 IGFBP4P22692 258 aa13.22□□□□□ -0.29
RETREG1-203ENST00000506441 MTFR1Q15390 333 aa13.22□□□□□ -0.29
RETREG1-203ENST00000506441 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
RETREG1-203ENST00000506441 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
RETREG1-203ENST00000506441 SSFA2P28290 1259 aa13.21□□□□□ -0.29
RETREG1-203ENST00000506441 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
RETREG1-203ENST00000506441 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
RETREG1-203ENST00000506441 KDF1Q8NAX2 398 aaPredicted RBP13.21□□□□□ -0.29
RETREG1-203ENST00000506441 SCHIP1Q9P0W5 487 aaPredicted RBP13.21□□□□□ -0.29
RETREG1-203ENST00000506441 DCAF1Q9Y4B6 1507 aa13.2□□□□□ -0.3
RETREG1-203ENST00000506441 CARNS1A5YM72 827 aa13.2□□□□□ -0.3
RETREG1-203ENST00000506441 FOXO3O43524 673 aa13.2□□□□□ -0.3
RETREG1-203ENST00000506441 RNF144AP50876 292 aaPredicted RBP13.2□□□□□ -0.3
RETREG1-203ENST00000506441 C1orf216Q8TAB5 229 aa13.2□□□□□ -0.3
RETREG1-203ENST00000506441 SCG3Q8WXD2 468 aaKnown RBP13.2□□□□□ -0.3
RETREG1-203ENST00000506441 PRIMPOLQ96LW4 560 aa13.2□□□□□ -0.3
RETREG1-203ENST00000506441 STAU1O95793 577 aaKnown RBP13.19□□□□□ -0.3
RETREG1-203ENST00000506441 WEE1P30291 646 aa13.19□□□□□ -0.3
RETREG1-203ENST00000506441 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
RETREG1-203ENST00000506441 CRIPAKQ8N1N5 446 aa13.19□□□□□ -0.3
RETREG1-203ENST00000506441 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
RETREG1-203ENST00000506441 ZCCHC6Q5VYS8 1495 aaKnown RBP13.18□□□□□ -0.3
RETREG1-203ENST00000506441 PPP1R12BO60237 982 aaPredicted RBP13.18□□□□□ -0.3
RETREG1-203ENST00000506441 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
RETREG1-203ENST00000506441 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
RETREG1-203ENST00000506441 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
RETREG1-203ENST00000506441 NIFKQ9BYG3 293 aaKnown RBP13.18□□□□□ -0.3
RETREG1-203ENST00000506441 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
RETREG1-203ENST00000506441 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
RETREG1-203ENST00000506441 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
RETREG1-203ENST00000506441 HRH3Q9Y5N1 445 aa13.17□□□□□ -0.3
RETREG1-203ENST00000506441 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
RETREG1-203ENST00000506441 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
RETREG1-203ENST00000506441 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
RETREG1-203ENST00000506441 EPHA4P54764 986 aa13.15□□□□□ -0.3
RETREG1-203ENST00000506441 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
RETREG1-203ENST00000506441 GRIP2Q9C0E4 1043 aa13.15□□□□□ -0.3
RETREG1-203ENST00000506441 FOXK2Q01167 660 aa13.14□□□□□ -0.31
RETREG1-203ENST00000506441 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
RETREG1-203ENST00000506441 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
RETREG1-203ENST00000506441 SERTM1A2A2V5 107 aa13.13□□□□□ -0.31
RETREG1-203ENST00000506441 TTLL8A6PVC2 850 aa13.13□□□□□ -0.31
RETREG1-203ENST00000506441 OCLNQ16625 522 aa13.13□□□□□ -0.31
RETREG1-203ENST00000506441 COL26A1Q96A83 441 aa13.13□□□□□ -0.31
RETREG1-203ENST00000506441 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
RETREG1-203ENST00000506441 TEAD4Q15561 434 aa13.12□□□□□ -0.31
RETREG1-203ENST00000506441 TAS1R3Q7RTX0 852 aa13.12□□□□□ -0.31
RETREG1-203ENST00000506441 LYSMD3Q7Z3D4 306 aa13.12□□□□□ -0.31
RETREG1-203ENST00000506441 LGR5O75473 907 aa13.11□□□□□ -0.31
RETREG1-203ENST00000506441 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
RETREG1-203ENST00000506441 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
RETREG1-203ENST00000506441 SENP2Q9HC62 589 aa13.11□□□□□ -0.31
RETREG1-203ENST00000506441 NOS2P35228 1153 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms