RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
ITGA3-207ENST00000506401 SOS1Q07889 1333 aaPredicted RBP22.9■■□□□ 1.26
ITGA3-207ENST00000506401 SPATA31A5Q5VU36 1347 aa22.9■■□□□ 1.26
ITGA3-207ENST00000506401 SPATA31A7Q8IWB4 1347 aa22.9■■□□□ 1.26
ITGA3-207ENST00000506401 LRP6O75581 1613 aa22.9■■□□□ 1.26
ITGA3-207ENST00000506401 FNBP4Q8N3X1 1017 aaPredicted RBP22.89■■□□□ 1.26
ITGA3-207ENST00000506401 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.26
ITGA3-207ENST00000506401 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.26
ITGA3-207ENST00000506401 SHANK3Q9BYB0 1731 aa22.89■■□□□ 1.26
ITGA3-207ENST00000506401 KIF16BQ96L93 1317 aa22.89■■□□□ 1.25
ITGA3-207ENST00000506401 EXOC5O00471 708 aa22.89■■□□□ 1.25
ITGA3-207ENST00000506401 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.25
ITGA3-207ENST00000506401 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.25
ITGA3-207ENST00000506401 IPO8O15397 1037 aaKnown RBP22.88■■□□□ 1.25
ITGA3-207ENST00000506401 ZKSCAN2Q63HK3 967 aa22.88■■□□□ 1.25
ITGA3-207ENST00000506401 MS4A1P11836 297 aa22.87■■□□□ 1.25
ITGA3-207ENST00000506401 EXOC6Q8TAG9 804 aa22.87■■□□□ 1.25
ITGA3-207ENST00000506401 CABP4P57796 275 aa22.87■■□□□ 1.25
ITGA3-207ENST00000506401 MRPL50Q8N5N7 158 aaKnown RBP22.87■■□□□ 1.25
ITGA3-207ENST00000506401 NFATC2IPQ8NCF5 419 aa22.87■■□□□ 1.25
ITGA3-207ENST00000506401 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
ITGA3-207ENST00000506401 VPS72Q15906 364 aa22.86■■□□□ 1.25
ITGA3-207ENST00000506401 CRBNQ96SW2 442 aa22.86■■□□□ 1.25
ITGA3-207ENST00000506401 NOB1Q9ULX3 412 aaKnown RBP22.86■■□□□ 1.25
ITGA3-207ENST00000506401 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
ITGA3-207ENST00000506401 BCL9LQ86UU0 1499 aa22.85■■□□□ 1.25
ITGA3-207ENST00000506401 MRC1P22897 1456 aa22.85■■□□□ 1.25
ITGA3-207ENST00000506401 BARGINQ6ZT62 677 aa22.85■■□□□ 1.25
ITGA3-207ENST00000506401 CHMP4AQ9BY43 222 aa22.85■■□□□ 1.25
ITGA3-207ENST00000506401 USP21Q9UK80 565 aa22.85■■□□□ 1.25
ITGA3-207ENST00000506401 TCERG1O14776 1098 aaKnown RBP22.83■■□□□ 1.25
ITGA3-207ENST00000506401 KCNQ3O43525 872 aa22.83■■□□□ 1.25
ITGA3-207ENST00000506401 ATF7IPQ6VMQ6 1270 aa22.83■■□□□ 1.25
ITGA3-207ENST00000506401 HOXB7P09629 217 aa22.82■■□□□ 1.24
ITGA3-207ENST00000506401 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.82■■□□□ 1.24
ITGA3-207ENST00000506401 CCDC30Q5VVM6 783 aa22.82■■□□□ 1.24
ITGA3-207ENST00000506401 ARHGAP45Q92619 1136 aa22.82■■□□□ 1.24
ITGA3-207ENST00000506401 DDB1Q16531 1140 aa22.81■■□□□ 1.24
ITGA3-207ENST00000506401 ZNF790Q6PG37 636 aa22.81■■□□□ 1.24
ITGA3-207ENST00000506401 FTSJ3Q8IY81 847 aaKnown RBP22.81■■□□□ 1.24
ITGA3-207ENST00000506401 DZIP1LQ8IYY4 767 aaKnown RBP22.81■■□□□ 1.24
ITGA3-207ENST00000506401 PANK1Q8TE04 598 aa22.81■■□□□ 1.24
ITGA3-207ENST00000506401 TNS2Q63HR2 1409 aa22.81■■□□□ 1.24
ITGA3-207ENST00000506401 CACNA1FO60840 1977 aa22.8■■□□□ 1.24
ITGA3-207ENST00000506401 STK31Q9BXU1 1019 aa22.8■■□□□ 1.24
ITGA3-207ENST00000506401 TTC5Q8N0Z6 440 aa22.8■■□□□ 1.24
ITGA3-207ENST00000506401 TRIM27P14373 513 aa22.79■■□□□ 1.24
ITGA3-207ENST00000506401 CLUAP1Q96AJ1 413 aa22.79■■□□□ 1.24
ITGA3-207ENST00000506401 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
ITGA3-207ENST00000506401 SLC39A6Q13433 755 aa22.78■■□□□ 1.24
ITGA3-207ENST00000506401 TNNQ9UQP3 1299 aa22.78■■□□□ 1.24
ITGA3-207ENST00000506401 AFF2P51816 1311 aa22.77■■□□□ 1.24
ITGA3-207ENST00000506401 HDGFL1Q5TGJ6 251 aa22.77■■□□□ 1.24
ITGA3-207ENST00000506401 COG6Q9Y2V7 657 aa22.77■■□□□ 1.24
ITGA3-207ENST00000506401 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
ITGA3-207ENST00000506401 API5Q9BZZ5 524 aaKnown RBP22.76■■□□□ 1.23
ITGA3-207ENST00000506401 GIGYF1O75420 1035 aaPredicted RBP22.75■■□□□ 1.23
ITGA3-207ENST00000506401 RLBP1P12271 317 aa22.75■■□□□ 1.23
ITGA3-207ENST00000506401 FAM98CQ17RN3 349 aaKnown RBP22.75■■□□□ 1.23
ITGA3-207ENST00000506401 KAT6BQ8WYB5 2073 aa22.75■■□□□ 1.23
ITGA3-207ENST00000506401 EIF2S2P20042 333 aaKnown RBP22.75■■□□□ 1.23
ITGA3-207ENST00000506401 NECTIN2Q92692 538 aa22.75■■□□□ 1.23
ITGA3-207ENST00000506401 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
ITGA3-207ENST00000506401 TMOD3Q9NYL9 352 aa22.75■■□□□ 1.23
ITGA3-207ENST00000506401 PTPRCP08575 1304 aa22.74■■□□□ 1.23
ITGA3-207ENST00000506401 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
ITGA3-207ENST00000506401 TOGARAM1Q9Y4F4 1720 aa22.73■■□□□ 1.23
ITGA3-207ENST00000506401 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
ITGA3-207ENST00000506401 B4GALNT3Q6L9W6 998 aa22.73■■□□□ 1.23
ITGA3-207ENST00000506401 AAMPQ13685 434 aa22.72■■□□□ 1.23
ITGA3-207ENST00000506401 ITGB4P16144 1822 aa22.72■■□□□ 1.23
ITGA3-207ENST00000506401 ZNF496Q96IT1 587 aaPredicted RBP22.71■■□□□ 1.23
ITGA3-207ENST00000506401 TRPC5Q9UL62 973 aaPredicted RBP22.71■■□□□ 1.23
ITGA3-207ENST00000506401 SNRPA1P09661 255 aaKnown RBP22.71■■□□□ 1.23
ITGA3-207ENST00000506401 GJD4Q96KN9 370 aaPredicted RBP22.71■■□□□ 1.23
ITGA3-207ENST00000506401 A0A0G2JS52 829 aa22.69■■□□□ 1.22
ITGA3-207ENST00000506401 MYT1Q01538 1121 aa22.69■■□□□ 1.22
ITGA3-207ENST00000506401 ITPRIPQ8IWB1 547 aa22.69■■□□□ 1.22
ITGA3-207ENST00000506401 TMEM57Q8N5G2 664 aa22.69■■□□□ 1.22
ITGA3-207ENST00000506401 MARCH10Q8NA82 808 aaPredicted RBP22.69■■□□□ 1.22
ITGA3-207ENST00000506401 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
ITGA3-207ENST00000506401 ATRNO75882 1429 aa22.68■■□□□ 1.22
ITGA3-207ENST00000506401 PIGBQ92521 554 aa22.68■■□□□ 1.22
ITGA3-207ENST00000506401 DBF4Q9UBU7 674 aaPredicted RBP22.68■■□□□ 1.22
ITGA3-207ENST00000506401 G2E3Q7L622 706 aa22.68■■□□□ 1.22
ITGA3-207ENST00000506401 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
ITGA3-207ENST00000506401 ABCC4O15439 1325 aa22.68■■□□□ 1.22
ITGA3-207ENST00000506401 FLIIQ13045 1269 aa22.67■■□□□ 1.22
ITGA3-207ENST00000506401 CHPF2Q9P2E5 772 aa22.67■■□□□ 1.22
ITGA3-207ENST00000506401 UBR2Q8IWV8 1755 aa22.67■■□□□ 1.22
ITGA3-207ENST00000506401 PRAMEF22A3QJZ6 481 aa22.66■■□□□ 1.22
ITGA3-207ENST00000506401 PRIM1P49642 420 aaKnown RBP22.66■■□□□ 1.22
ITGA3-207ENST00000506401 SYTL4Q96C24 671 aaPredicted RBP22.66■■□□□ 1.22
ITGA3-207ENST00000506401 CHMP4BQ9H444 224 aaKnown RBP22.66■■□□□ 1.22
ITGA3-207ENST00000506401 QTRT2Q9H974 415 aaKnown RBP22.66■■□□□ 1.22
ITGA3-207ENST00000506401 BCL9O00512 1426 aa22.65■■□□□ 1.22
ITGA3-207ENST00000506401 GLI3P10071 1580 aa22.65■■□□□ 1.22
ITGA3-207ENST00000506401 C5P01031 1676 aa22.65■■□□□ 1.22
ITGA3-207ENST00000506401 DOT1LQ8TEK3 1739 aa22.65■■□□□ 1.22
ITGA3-207ENST00000506401 FKBP5Q13451 457 aaPredicted RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms