RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 MTHFSDQ2M296 383 aaKnown RBP18.72■□□□□ 0.59
SNHG4-203ENST00000506188 KLHL34Q8N239 644 aa18.72■□□□□ 0.59
SNHG4-203ENST00000506188 FHDC1Q9C0D6 1143 aaPredicted RBP18.72■□□□□ 0.59
SNHG4-203ENST00000506188 GNPATO15228 680 aa18.71■□□□□ 0.59
SNHG4-203ENST00000506188 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
SNHG4-203ENST00000506188 PHF14O94880 888 aa18.71■□□□□ 0.59
SNHG4-203ENST00000506188 SLC52A2Q9HAB3 445 aa18.71■□□□□ 0.59
SNHG4-203ENST00000506188 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
SNHG4-203ENST00000506188 PAPPAQ13219 1627 aa18.71■□□□□ 0.58
SNHG4-203ENST00000506188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
SNHG4-203ENST00000506188 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
SNHG4-203ENST00000506188 RNMTO43148 476 aaKnown RBP18.7■□□□□ 0.58
SNHG4-203ENST00000506188 TEFQ10587 303 aa18.7■□□□□ 0.58
SNHG4-203ENST00000506188 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
SNHG4-203ENST00000506188 SYT17Q9BSW7 474 aa18.7■□□□□ 0.58
SNHG4-203ENST00000506188 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
SNHG4-203ENST00000506188 FCHSD2O94868 740 aa18.69■□□□□ 0.58
SNHG4-203ENST00000506188 RALBP1Q15311 655 aa18.69■□□□□ 0.58
SNHG4-203ENST00000506188 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
SNHG4-203ENST00000506188 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
SNHG4-203ENST00000506188 KDM6AO15550 1401 aaPredicted RBP18.68■□□□□ 0.58
SNHG4-203ENST00000506188 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
SNHG4-203ENST00000506188 ITPK1Q13572 414 aa18.68■□□□□ 0.58
SNHG4-203ENST00000506188 RC3H1Q5TC82 1133 aaKnown RBP18.68■□□□□ 0.58
SNHG4-203ENST00000506188 TTC5Q8N0Z6 440 aa18.68■□□□□ 0.58
SNHG4-203ENST00000506188 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
SNHG4-203ENST00000506188 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
SNHG4-203ENST00000506188 ADRA2BP18089 450 aa18.67■□□□□ 0.58
SNHG4-203ENST00000506188 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SNHG4-203ENST00000506188 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
SNHG4-203ENST00000506188 LY75O60449 1722 aa18.66■□□□□ 0.58
SNHG4-203ENST00000506188 RFC4P35249 363 aa18.65■□□□□ 0.58
SNHG4-203ENST00000506188 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
SNHG4-203ENST00000506188 MAP3K5Q99683 1374 aa18.65■□□□□ 0.58
SNHG4-203ENST00000506188 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
SNHG4-203ENST00000506188 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
SNHG4-203ENST00000506188 RPS6KA4O75676 772 aa18.63■□□□□ 0.57
SNHG4-203ENST00000506188 NLGN1Q8N2Q7 840 aa18.63■□□□□ 0.57
SNHG4-203ENST00000506188 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
SNHG4-203ENST00000506188 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
SNHG4-203ENST00000506188 GPR162Q16538 588 aa18.62■□□□□ 0.57
SNHG4-203ENST00000506188 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
SNHG4-203ENST00000506188 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
SNHG4-203ENST00000506188 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
SNHG4-203ENST00000506188 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
SNHG4-203ENST00000506188 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
SNHG4-203ENST00000506188 STARD3NLO95772 234 aa18.6■□□□□ 0.57
SNHG4-203ENST00000506188 CRKLP46109 303 aaKnown RBP18.6■□□□□ 0.57
SNHG4-203ENST00000506188 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
SNHG4-203ENST00000506188 CD2APQ9Y5K6 639 aa18.6■□□□□ 0.57
SNHG4-203ENST00000506188 ITGB4P16144 1822 aa18.6■□□□□ 0.57
SNHG4-203ENST00000506188 MAPK8IP3Q9UPT6 1336 aa18.59■□□□□ 0.57
SNHG4-203ENST00000506188 SLC39A6Q13433 755 aa18.59■□□□□ 0.57
SNHG4-203ENST00000506188 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
SNHG4-203ENST00000506188 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
SNHG4-203ENST00000506188 C4BP0C0L5 1744 aa18.59■□□□□ 0.57
SNHG4-203ENST00000506188 C5P01031 1676 aa18.59■□□□□ 0.57
SNHG4-203ENST00000506188 ARHGEF1Q92888 912 aaKnown RBP18.58■□□□□ 0.56
SNHG4-203ENST00000506188 CCDC87Q9NVE4 849 aa18.58■□□□□ 0.56
SNHG4-203ENST00000506188 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
SNHG4-203ENST00000506188 ZPR1O75312 459 aa18.57■□□□□ 0.56
SNHG4-203ENST00000506188 YY1P25490 414 aa18.57■□□□□ 0.56
SNHG4-203ENST00000506188 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
SNHG4-203ENST00000506188 DNAJC10Q8IXB1 793 aa18.57■□□□□ 0.56
SNHG4-203ENST00000506188 SMIM5Q71RC9 77 aa18.56■□□□□ 0.56
SNHG4-203ENST00000506188 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
SNHG4-203ENST00000506188 QSER1Q2KHR3 1735 aa18.56■□□□□ 0.56
SNHG4-203ENST00000506188 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
SNHG4-203ENST00000506188 GRIN3BO60391 1043 aa18.55■□□□□ 0.56
SNHG4-203ENST00000506188 MMP10P09238 476 aa18.55■□□□□ 0.56
SNHG4-203ENST00000506188 AMIGO3Q86WK7 504 aa18.55■□□□□ 0.56
SNHG4-203ENST00000506188 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
SNHG4-203ENST00000506188 A0A087WZG4 1122 aa18.53■□□□□ 0.56
SNHG4-203ENST00000506188 CYP19A1P11511 503 aaPredicted RBP18.53■□□□□ 0.56
SNHG4-203ENST00000506188 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNHG4-203ENST00000506188 MRC1P22897 1456 aa18.52■□□□□ 0.56
SNHG4-203ENST00000506188 INTS5Q6P9B9 1019 aaKnown RBP18.52■□□□□ 0.56
SNHG4-203ENST00000506188 MCM10Q7L590 875 aa18.52■□□□□ 0.56
SNHG4-203ENST00000506188 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
SNHG4-203ENST00000506188 TAF7Q15545 349 aaPredicted RBP18.51■□□□□ 0.55
SNHG4-203ENST00000506188 ZNF496Q96IT1 587 aaPredicted RBP18.51■□□□□ 0.55
SNHG4-203ENST00000506188 CEMIPQ8WUJ3 1361 aa18.51■□□□□ 0.55
SNHG4-203ENST00000506188 GYS1P13807 737 aa18.5■□□□□ 0.55
SNHG4-203ENST00000506188 CANXP27824 592 aaKnown RBP18.5■□□□□ 0.55
SNHG4-203ENST00000506188 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
SNHG4-203ENST00000506188 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
SNHG4-203ENST00000506188 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
SNHG4-203ENST00000506188 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
SNHG4-203ENST00000506188 ZNF831Q5JPB2 1677 aa18.49■□□□□ 0.55
SNHG4-203ENST00000506188 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
SNHG4-203ENST00000506188 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
SNHG4-203ENST00000506188 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
SNHG4-203ENST00000506188 SNRPA1P09661 255 aaKnown RBP18.47■□□□□ 0.55
SNHG4-203ENST00000506188 TGFB2P61812 414 aa18.47■□□□□ 0.55
SNHG4-203ENST00000506188 NARFQ9UHQ1 456 aa18.47■□□□□ 0.55
SNHG4-203ENST00000506188 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
SNHG4-203ENST00000506188 ZNF330Q9Y3S2 320 aaPredicted RBP18.47■□□□□ 0.55
SNHG4-203ENST00000506188 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
SNHG4-203ENST00000506188 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
SNHG4-203ENST00000506188 USPL1Q5W0Q7 1092 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms