RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 LOC102724428A0A0B4J2F2 783 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 SIK1P57059 783 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
NR1I3-222ENST00000506018 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 UBR3Q6ZT12 1888 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 CHD4Q14839 1912 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 PER1O15534 1290 aaPredicted RBP14.09□□□□□ -0.15
NR1I3-222ENST00000506018 YY1P25490 414 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 IL13P35225 146 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 MTHFSP49914 203 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 CABP4P57796 275 aa14.09□□□□□ -0.15
NR1I3-222ENST00000506018 COL23A1Q86Y22 540 aaPredicted RBP14.09□□□□□ -0.15
NR1I3-222ENST00000506018 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.15
NR1I3-222ENST00000506018 ATP6V1AP38606 617 aa14.08□□□□□ -0.16
NR1I3-222ENST00000506018 KDRP35968 1356 aa14.08□□□□□ -0.16
NR1I3-222ENST00000506018 VIRMAQ69YN4 1812 aaKnown RBP14.07□□□□□ -0.16
NR1I3-222ENST00000506018 SCN11AQ9UI33 1791 aa14.07□□□□□ -0.16
NR1I3-222ENST00000506018 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
NR1I3-222ENST00000506018 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
NR1I3-222ENST00000506018 AEBP1Q8IUX7 1158 aa14.07□□□□□ -0.16
NR1I3-222ENST00000506018 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
NR1I3-222ENST00000506018 ASAP1Q9ULH1 1129 aa14.07□□□□□ -0.16
NR1I3-222ENST00000506018 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
NR1I3-222ENST00000506018 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
NR1I3-222ENST00000506018 SSFA2P28290 1259 aa14.06□□□□□ -0.16
NR1I3-222ENST00000506018 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
NR1I3-222ENST00000506018 PHF14O94880 888 aa14.05□□□□□ -0.16
NR1I3-222ENST00000506018 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
NR1I3-222ENST00000506018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.04□□□□□ -0.16
NR1I3-222ENST00000506018 CNGB1Q14028 1251 aaPredicted RBP14.04□□□□□ -0.16
NR1I3-222ENST00000506018 AKAP4Q5JQC9 854 aa14.04□□□□□ -0.16
NR1I3-222ENST00000506018 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
NR1I3-222ENST00000506018 KDM6AO15550 1401 aaPredicted RBP14.04□□□□□ -0.16
NR1I3-222ENST00000506018 GNPATO15228 680 aa14.03□□□□□ -0.16
NR1I3-222ENST00000506018 GPR162Q16538 588 aa14.03□□□□□ -0.16
NR1I3-222ENST00000506018 MSL1Q68DK7 614 aa14.03□□□□□ -0.16
NR1I3-222ENST00000506018 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
NR1I3-222ENST00000506018 COL5A3P25940 1745 aaPredicted RBP14.02□□□□□ -0.16
NR1I3-222ENST00000506018 HMOX1P09601 288 aa14.02□□□□□ -0.17
NR1I3-222ENST00000506018 RTCBQ9Y3I0 505 aaKnown RBP14.02□□□□□ -0.17
NR1I3-222ENST00000506018 ITPK1Q13572 414 aa14.01□□□□□ -0.17
NR1I3-222ENST00000506018 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
NR1I3-222ENST00000506018 NFATC2IPQ8NCF5 419 aa14.01□□□□□ -0.17
NR1I3-222ENST00000506018 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
NR1I3-222ENST00000506018 TRAPPC3LQ5T215 181 aa14□□□□□ -0.17
NR1I3-222ENST00000506018 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
NR1I3-222ENST00000506018 CD2APQ9Y5K6 639 aa14□□□□□ -0.17
NR1I3-222ENST00000506018 CNTNAP4Q9C0A0 1308 aa13.99□□□□□ -0.17
NR1I3-222ENST00000506018 PTCD1O75127 700 aaKnown RBP13.98□□□□□ -0.17
NR1I3-222ENST00000506018 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
NR1I3-222ENST00000506018 GRIN3BO60391 1043 aa13.97□□□□□ -0.17
NR1I3-222ENST00000506018 GAS2L2Q8NHY3 880 aa13.97□□□□□ -0.17
NR1I3-222ENST00000506018 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
NR1I3-222ENST00000506018 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
NR1I3-222ENST00000506018 CICQ96RK0 1608 aaPredicted RBP13.97□□□□□ -0.17
NR1I3-222ENST00000506018 MYH14Q7Z406 1995 aaKnown RBP13.97□□□□□ -0.17
NR1I3-222ENST00000506018 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
NR1I3-222ENST00000506018 RFC4P35249 363 aa13.96□□□□□ -0.17
NR1I3-222ENST00000506018 NLGN1Q8N2Q7 840 aa13.96□□□□□ -0.17
NR1I3-222ENST00000506018 NLGN2Q8NFZ4 835 aa13.96□□□□□ -0.17
NR1I3-222ENST00000506018 RPS6KA4O75676 772 aa13.96□□□□□ -0.18
NR1I3-222ENST00000506018 MTHFSDQ2M296 383 aaKnown RBP13.96□□□□□ -0.18
NR1I3-222ENST00000506018 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.18
NR1I3-222ENST00000506018 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.18
NR1I3-222ENST00000506018 MRC1P22897 1456 aa13.95□□□□□ -0.18
NR1I3-222ENST00000506018 TJP1Q07157 1748 aa13.95□□□□□ -0.18
NR1I3-222ENST00000506018 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
NR1I3-222ENST00000506018 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
NR1I3-222ENST00000506018 C4AP0C0L4 1744 aa13.94□□□□□ -0.18
NR1I3-222ENST00000506018 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
NR1I3-222ENST00000506018 CRKLP46109 303 aaKnown RBP13.94□□□□□ -0.18
NR1I3-222ENST00000506018 TEFQ10587 303 aa13.94□□□□□ -0.18
NR1I3-222ENST00000506018 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
NR1I3-222ENST00000506018 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
NR1I3-222ENST00000506018 UTRNP46939 3433 aa13.93□□□□□ -0.18
NR1I3-222ENST00000506018 MMP10P09238 476 aa13.93□□□□□ -0.18
NR1I3-222ENST00000506018 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
NR1I3-222ENST00000506018 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
NR1I3-222ENST00000506018 NEFMP07197 916 aa13.92□□□□□ -0.18
NR1I3-222ENST00000506018 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
NR1I3-222ENST00000506018 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
NR1I3-222ENST00000506018 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
NR1I3-222ENST00000506018 U2AF1L5P0DN76 240 aaPredicted RBP13.91□□□□□ -0.18
NR1I3-222ENST00000506018 U2AF1Q01081 240 aaKnown RBP eCLIP13.91□□□□□ -0.18
NR1I3-222ENST00000506018 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
NR1I3-222ENST00000506018 CCDC87Q9NVE4 849 aa13.91□□□□□ -0.18
NR1I3-222ENST00000506018 PARP3Q9Y6F1 533 aa13.91□□□□□ -0.18
NR1I3-222ENST00000506018 ZPR1O75312 459 aa13.9□□□□□ -0.18
NR1I3-222ENST00000506018 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
NR1I3-222ENST00000506018 SLC39A6Q13433 755 aa13.9□□□□□ -0.18
NR1I3-222ENST00000506018 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
NR1I3-222ENST00000506018 ZNF784Q8NCA9 323 aaPredicted RBP13.9□□□□□ -0.18
NR1I3-222ENST00000506018 SIPA1L3O60292 1781 aaPredicted RBP13.89□□□□□ -0.19
NR1I3-222ENST00000506018 FCHSD2O94868 740 aa13.89□□□□□ -0.19
NR1I3-222ENST00000506018 GYS1P13807 737 aa13.89□□□□□ -0.19
NR1I3-222ENST00000506018 YBX3P16989 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
NR1I3-222ENST00000506018 DNAJC10Q8IXB1 793 aa13.89□□□□□ -0.19
NR1I3-222ENST00000506018 RTF1Q92541 710 aaKnown RBP13.89□□□□□ -0.19
NR1I3-222ENST00000506018 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
NR1I3-222ENST00000506018 STARD3NLO95772 234 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms