RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
CPNE4-206ENST00000505957 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
CPNE4-206ENST00000505957 EYA1Q99502 592 aa14.55□□□□□ -0.08
CPNE4-206ENST00000505957 PLEKHG2Q9H7P9 1386 aa14.55□□□□□ -0.08
CPNE4-206ENST00000505957 ITGB4P16144 1822 aa14.55□□□□□ -0.08
CPNE4-206ENST00000505957 KIF3CO14782 793 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 GNPATO15228 680 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 PHKG2P15735 406 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 ITPK1Q13572 414 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 ANKRD26Q9UPS8 1709 aa14.54□□□□□ -0.08
CPNE4-206ENST00000505957 MAP2P11137 1827 aaKnown RBP14.54□□□□□ -0.08
CPNE4-206ENST00000505957 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
CPNE4-206ENST00000505957 TGFB2P61812 414 aa14.53□□□□□ -0.08
CPNE4-206ENST00000505957 MMP10P09238 476 aa14.52□□□□□ -0.09
CPNE4-206ENST00000505957 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.09
CPNE4-206ENST00000505957 ATG3Q9NT62 314 aa14.52□□□□□ -0.09
CPNE4-206ENST00000505957 CICQ96RK0 1608 aaPredicted RBP14.52□□□□□ -0.09
CPNE4-206ENST00000505957 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
CPNE4-206ENST00000505957 PRKRIP1Q9H875 184 aaPredicted RBP14.51□□□□□ -0.09
CPNE4-206ENST00000505957 POLKQ9UBT6 870 aa14.51□□□□□ -0.09
CPNE4-206ENST00000505957 WWC3Q9ULE0 1092 aa14.51□□□□□ -0.09
CPNE4-206ENST00000505957 ADRA2BP18089 450 aa14.5□□□□□ -0.09
CPNE4-206ENST00000505957 RC3H1Q5TC82 1133 aaKnown RBP14.5□□□□□ -0.09
CPNE4-206ENST00000505957 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
CPNE4-206ENST00000505957 PXDNLA1KZ92 1463 aa14.5□□□□□ -0.09
CPNE4-206ENST00000505957 KDRP35968 1356 aa14.49□□□□□ -0.09
CPNE4-206ENST00000505957 ERVV-2B6SEH9 535 aa14.49□□□□□ -0.09
CPNE4-206ENST00000505957 CENPBP07199 599 aaPredicted RBP14.49□□□□□ -0.09
CPNE4-206ENST00000505957 APLP1P51693 650 aa14.49□□□□□ -0.09
CPNE4-206ENST00000505957 TOMM70O94826 608 aa14.48□□□□□ -0.09
CPNE4-206ENST00000505957 HSP90AB1P08238 724 aaKnown RBP14.48□□□□□ -0.09
CPNE4-206ENST00000505957 C10orf71Q711Q0 1435 aa14.48□□□□□ -0.09
CPNE4-206ENST00000505957 CNTNAP4Q9C0A0 1308 aa14.47□□□□□ -0.09
CPNE4-206ENST00000505957 EIF4A2Q14240 407 aaKnown RBP14.47□□□□□ -0.09
CPNE4-206ENST00000505957 ARHGEF1Q92888 912 aaKnown RBP14.47□□□□□ -0.09
CPNE4-206ENST00000505957 DCAF5Q96JK2 942 aa14.47□□□□□ -0.09
CPNE4-206ENST00000505957 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
CPNE4-206ENST00000505957 CCDC87Q9NVE4 849 aa14.47□□□□□ -0.09
CPNE4-206ENST00000505957 BCS1LQ9Y276 419 aa14.47□□□□□ -0.09
CPNE4-206ENST00000505957 KIF13BQ9NQT8 1826 aa14.46□□□□□ -0.09
CPNE4-206ENST00000505957 A0A0G2JLW4 131 aa14.46□□□□□ -0.09
CPNE4-206ENST00000505957 RPS6KA4O75676 772 aa14.46□□□□□ -0.09
CPNE4-206ENST00000505957 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.1
CPNE4-206ENST00000505957 GYS1P13807 737 aa14.45□□□□□ -0.1
CPNE4-206ENST00000505957 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
CPNE4-206ENST00000505957 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
CPNE4-206ENST00000505957 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
CPNE4-206ENST00000505957 DPEP1P16444 411 aa14.44□□□□□ -0.1
CPNE4-206ENST00000505957 RFC4P35249 363 aa14.44□□□□□ -0.1
CPNE4-206ENST00000505957 PLEKHO1Q53GL0 409 aaPredicted RBP14.44□□□□□ -0.1
CPNE4-206ENST00000505957 ARHGAP27Q6ZUM4 889 aa14.44□□□□□ -0.1
CPNE4-206ENST00000505957 DNAJC5GQ8N7S2 189 aa14.44□□□□□ -0.1
CPNE4-206ENST00000505957 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
CPNE4-206ENST00000505957 KIAA1551Q9HCM1 1747 aa14.44□□□□□ -0.1
CPNE4-206ENST00000505957 FCHSD2O94868 740 aa14.43□□□□□ -0.1
CPNE4-206ENST00000505957 RALBP1Q15311 655 aa14.43□□□□□ -0.1
CPNE4-206ENST00000505957 AMOTQ4VCS5 1084 aa14.43□□□□□ -0.1
CPNE4-206ENST00000505957 POLR3GLQ9BT43 218 aa14.43□□□□□ -0.1
CPNE4-206ENST00000505957 KCNA3P22001 575 aa14.42□□□□□ -0.1
CPNE4-206ENST00000505957 CABP4P57796 275 aa14.42□□□□□ -0.1
CPNE4-206ENST00000505957 RBM46Q8TBY0 533 aaKnown RBP14.41□□□□□ -0.1
CPNE4-206ENST00000505957 NMRK2Q9NPI5 230 aa14.41□□□□□ -0.1
CPNE4-206ENST00000505957 PIM2Q9P1W9 311 aa14.41□□□□□ -0.1
CPNE4-206ENST00000505957 C4AP0C0L4 1744 aa14.41□□□□□ -0.1
CPNE4-206ENST00000505957 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
CPNE4-206ENST00000505957 TNNT2P45379 298 aaPredicted RBP14.4□□□□□ -0.1
CPNE4-206ENST00000505957 C9orf131Q5VYM1 1079 aa14.4□□□□□ -0.1
CPNE4-206ENST00000505957 ZNF530Q6P9A1 599 aaPredicted RBP14.4□□□□□ -0.1
CPNE4-206ENST00000505957 N4BP2Q86UW6 1770 aaPredicted RBP14.39□□□□□ -0.11
CPNE4-206ENST00000505957 MTHFSP49914 203 aa14.39□□□□□ -0.11
CPNE4-206ENST00000505957 COL5A3P25940 1745 aaPredicted RBP14.38□□□□□ -0.11
CPNE4-206ENST00000505957 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
CPNE4-206ENST00000505957 FSTL1Q12841 308 aa14.38□□□□□ -0.11
CPNE4-206ENST00000505957 DALRD3Q5D0E6 543 aaKnown RBP14.38□□□□□ -0.11
CPNE4-206ENST00000505957 PANK3Q9H999 370 aa14.38□□□□□ -0.11
CPNE4-206ENST00000505957 MYBBP1AQ9BQG0 1328 aaKnown RBP14.38□□□□□ -0.11
CPNE4-206ENST00000505957 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
CPNE4-206ENST00000505957 PTCD1O75127 700 aaKnown RBP14.37□□□□□ -0.11
CPNE4-206ENST00000505957 C1orf141Q5JVX7 400 aa14.37□□□□□ -0.11
CPNE4-206ENST00000505957 C16orf71Q8IYS4 520 aaPredicted RBP14.37□□□□□ -0.11
CPNE4-206ENST00000505957 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
CPNE4-206ENST00000505957 KDM2BQ8NHM5 1336 aa14.37□□□□□ -0.11
CPNE4-206ENST00000505957 DDR1Q08345 913 aa14.36□□□□□ -0.11
CPNE4-206ENST00000505957 FKBP8Q14318 412 aa14.36□□□□□ -0.11
CPNE4-206ENST00000505957 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
CPNE4-206ENST00000505957 SRP68Q9UHB9 627 aaKnown RBP14.36□□□□□ -0.11
CPNE4-206ENST00000505957 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
CPNE4-206ENST00000505957 MYH14Q7Z406 1995 aaKnown RBP14.35□□□□□ -0.11
CPNE4-206ENST00000505957 TM4SF1P30408 202 aa14.35□□□□□ -0.11
CPNE4-206ENST00000505957 KLRG1Q96E93 195 aa14.35□□□□□ -0.11
CPNE4-206ENST00000505957 ARFGEF1Q9Y6D6 1849 aa14.34□□□□□ -0.11
CPNE4-206ENST00000505957 POLRMTO00411 1230 aaKnown RBP14.34□□□□□ -0.11
CPNE4-206ENST00000505957 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
CPNE4-206ENST00000505957 INTS5Q6P9B9 1019 aaKnown RBP14.34□□□□□ -0.11
CPNE4-206ENST00000505957 AEBP1Q8IUX7 1158 aa14.34□□□□□ -0.11
CPNE4-206ENST00000505957 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
CPNE4-206ENST00000505957 RNF181Q9P0P0 153 aa14.34□□□□□ -0.11
CPNE4-206ENST00000505957 ZC3H4Q9UPT8 1303 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms