RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PTGIRP43119 386 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 MARSP56192 900 aaKnown RBP7.83□□□□□ -1.16
CHD1-203ENST00000505657 CLDN10P78369 228 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 CDCA8Q53HL2 280 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 KANK4Q5T7N3 995 aaPredicted RBP7.83□□□□□ -1.16
CHD1-203ENST00000505657 SV2AQ7L0J3 742 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 CYP2U1Q7Z449 544 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 ARID3AQ99856 593 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 ARHGEF10LQ9HCE6 1279 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 MKRN1Q9UHC7 482 aaKnown RBP7.83□□□□□ -1.16
CHD1-203ENST00000505657 NOD1Q9Y239 953 aa7.83□□□□□ -1.16
CHD1-203ENST00000505657 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.82□□□□□ -1.16
CHD1-203ENST00000505657 LZTS3O60299 673 aaPredicted RBP7.82□□□□□ -1.16
CHD1-203ENST00000505657 IGHA1P01876 353 aa7.82□□□□□ -1.16
CHD1-203ENST00000505657 ITGA6P23229 1130 aa7.82□□□□□ -1.16
CHD1-203ENST00000505657 SCNN1DP51172 638 aa7.82□□□□□ -1.16
CHD1-203ENST00000505657 GTF2IP78347 998 aa7.82□□□□□ -1.16
CHD1-203ENST00000505657 A0A1W2PRU2 124 aa7.81□□□□□ -1.16
CHD1-203ENST00000505657 IL2RAP01589 272 aa7.81□□□□□ -1.16
CHD1-203ENST00000505657 CTSOP43234 321 aaPredicted RBP7.81□□□□□ -1.16
CHD1-203ENST00000505657 SRPK2P78362 688 aaKnown RBP7.81□□□□□ -1.16
CHD1-203ENST00000505657 INSM2Q96T92 566 aaPredicted RBP7.81□□□□□ -1.16
CHD1-203ENST00000505657 ESF1Q9H501 851 aaKnown RBP7.81□□□□□ -1.16
CHD1-203ENST00000505657 ETNK1Q9HBU6 452 aa7.81□□□□□ -1.16
CHD1-203ENST00000505657 ZBTB7BO15156 539 aaPredicted RBP7.8□□□□□ -1.16
CHD1-203ENST00000505657 CRTC2Q53ET0 693 aaPredicted RBP7.8□□□□□ -1.16
CHD1-203ENST00000505657 FOXD4L5Q5VV16 416 aaPredicted RBP7.8□□□□□ -1.16
CHD1-203ENST00000505657 KANK3Q6NY19 840 aa7.8□□□□□ -1.16
CHD1-203ENST00000505657 OGFOD1Q8N543 542 aa7.8□□□□□ -1.16
CHD1-203ENST00000505657 SIRT1Q96EB6 747 aa7.8□□□□□ -1.16
CHD1-203ENST00000505657 TMEM229AB2RXF0 380 aa7.79□□□□□ -1.16
CHD1-203ENST00000505657 MEN1O00255 615 aa7.79□□□□□ -1.16
CHD1-203ENST00000505657 DKK1O94907 266 aa7.79□□□□□ -1.16
CHD1-203ENST00000505657 GNRH1P01148 92 aa7.79□□□□□ -1.16
CHD1-203ENST00000505657 LYPD4Q6UWN0 246 aa7.79□□□□□ -1.16
CHD1-203ENST00000505657 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
CHD1-203ENST00000505657 ADAMTS2O95450 1211 aa7.78□□□□□ -1.16
CHD1-203ENST00000505657 GDF10P55107 478 aa7.78□□□□□ -1.16
CHD1-203ENST00000505657 PSME1Q06323 249 aa7.78□□□□□ -1.16
CHD1-203ENST00000505657 TRIM52Q96A61 297 aa7.78□□□□□ -1.16
CHD1-203ENST00000505657 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
CHD1-203ENST00000505657 VRTNQ9H8Y1 702 aa7.78□□□□□ -1.16
CHD1-203ENST00000505657 POLMQ9NP87 494 aaPredicted RBP7.78□□□□□ -1.16
CHD1-203ENST00000505657 DNAAF2Q9NVR5 837 aaKnown RBP7.78□□□□□ -1.16
CHD1-203ENST00000505657 HRH3Q9Y5N1 445 aa7.78□□□□□ -1.16
CHD1-203ENST00000505657 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L10C9JJH3 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L21D6R901 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 RASA1P20936 1047 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 FOXK2Q01167 660 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 CLN3Q13286 438 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 PTK7Q13308 1070 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
CHD1-203ENST00000505657 TPCN2Q8NHX9 752 aa7.77□□□□□ -1.17
CHD1-203ENST00000505657 SENP3-EIF4A1A0A087X0R7 540 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 CCDC102BQ68D86 513 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 RNF217Q8TC41 542 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 CNKSR1Q969H4 720 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 XAGE2Q96GT9 111 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 ZNF358Q9NW07 568 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 SERTAD1Q9UHV2 236 aa7.76□□□□□ -1.17
CHD1-203ENST00000505657 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 INHAP05111 366 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 SIX5Q8N196 739 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 ARXQ96QS3 562 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 ESYT1Q9BSJ8 1104 aa7.75□□□□□ -1.17
CHD1-203ENST00000505657 FHDC1Q9C0D6 1143 aaPredicted RBP7.75□□□□□ -1.17
CHD1-203ENST00000505657 FAM196BA6NMK8 535 aa7.74□□□□□ -1.17
CHD1-203ENST00000505657 WASLO00401 505 aaPredicted RBP7.74□□□□□ -1.17
CHD1-203ENST00000505657 CELA2BP08218 269 aaPredicted RBP7.74□□□□□ -1.17
CHD1-203ENST00000505657 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
CHD1-203ENST00000505657 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
CHD1-203ENST00000505657 ZMIZ1Q9ULJ6 1067 aa7.74□□□□□ -1.17
CHD1-203ENST00000505657 USP3Q9Y6I4 520 aa7.74□□□□□ -1.17
CHD1-203ENST00000505657 RNF144AP50876 292 aaPredicted RBP7.73□□□□□ -1.17
CHD1-203ENST00000505657 MAP3K10Q02779 954 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 CENPCQ03188 943 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 SRSF11Q05519 484 aaKnown RBP7.73□□□□□ -1.17
CHD1-203ENST00000505657 DPYDQ12882 1025 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 GAS6Q14393 721 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 ESCO1Q5FWF5 840 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 XP32Q5T750 250 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 NLRP3Q96P20 1036 aa7.73□□□□□ -1.17
CHD1-203ENST00000505657 CUEDC1Q9NWM3 386 aaPredicted RBP7.73□□□□□ -1.17
CHD1-203ENST00000505657 LGR5O75473 907 aa7.72□□□□□ -1.17
CHD1-203ENST00000505657 TLR1Q15399 786 aa7.72□□□□□ -1.17
CHD1-203ENST00000505657 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
CHD1-203ENST00000505657 STK32AQ8WU08 396 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms